RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 RPS12P25398 132 aaKnown RBP25.56■■□□□ 1.68
XRCC3-205ENST00000553807 HTRA3P83110 453 aa25.56■■□□□ 1.68
XRCC3-205ENST00000553807 USP17L3A6NCW0 530 aa25.55■■□□□ 1.68
XRCC3-205ENST00000553807 USP17L4A6NCW7 530 aa25.55■■□□□ 1.68
XRCC3-205ENST00000553807 H7C1D1 291 aa25.55■■□□□ 1.68
XRCC3-205ENST00000553807 VIL1P09327 827 aaKnown RBP25.55■■□□□ 1.68
XRCC3-205ENST00000553807 LRRC24Q50LG9 513 aa25.55■■□□□ 1.68
XRCC3-205ENST00000553807 USP17L1Q7RTZ2 530 aa25.55■■□□□ 1.68
XRCC3-205ENST00000553807 TRPM4Q8TD43 1214 aa25.55■■□□□ 1.68
XRCC3-205ENST00000553807 DPF2Q92785 391 aa25.55■■□□□ 1.68
XRCC3-205ENST00000553807 HDAC5Q9UQL6 1122 aa25.55■■□□□ 1.68
XRCC3-205ENST00000553807 GNAI3P08754 354 aa25.54■■□□□ 1.68
XRCC3-205ENST00000553807 METTL24Q5JXM2 366 aa25.54■■□□□ 1.68
XRCC3-205ENST00000553807 RSBN1LQ6PCB5 846 aaPredicted RBP25.54■■□□□ 1.68
XRCC3-205ENST00000553807 FTSJ3Q8IY81 847 aaKnown RBP25.54■■□□□ 1.68
XRCC3-205ENST00000553807 TMEM57Q8N5G2 664 aa25.54■■□□□ 1.68
XRCC3-205ENST00000553807 MROH5Q6ZUA9 1318 aa25.54■■□□□ 1.68
XRCC3-205ENST00000553807 RIPOR2Q9Y4F9 1068 aa25.53■■□□□ 1.68
XRCC3-205ENST00000553807 IRS2Q9Y4H2 1338 aa25.53■■□□□ 1.68
XRCC3-205ENST00000553807 RFX5P48382 616 aaPredicted RBP25.52■■□□□ 1.68
XRCC3-205ENST00000553807 SAMD7Q7Z3H4 446 aa25.52■■□□□ 1.68
XRCC3-205ENST00000553807 CNTROBQ8N137 903 aa25.52■■□□□ 1.68
XRCC3-205ENST00000553807 TBC1D10BQ4KMP7 808 aaPredicted RBP25.51■■□□□ 1.67
XRCC3-205ENST00000553807 C15orf52Q6ZUT6 534 aaKnown RBP25.51■■□□□ 1.67
XRCC3-205ENST00000553807 ZNF804AQ7Z570 1209 aa25.51■■□□□ 1.67
XRCC3-205ENST00000553807 MXD3Q9BW11 206 aa25.51■■□□□ 1.67
XRCC3-205ENST00000553807 ZNF609O15014 1411 aa25.51■■□□□ 1.67
XRCC3-205ENST00000553807 ZNF646O15015 1829 aaPredicted RBP25.5■■□□□ 1.67
XRCC3-205ENST00000553807 ITGBL1O95965 494 aaPredicted RBP25.5■■□□□ 1.67
XRCC3-205ENST00000553807 HIRAP54198 1017 aaPredicted RBP25.5■■□□□ 1.67
XRCC3-205ENST00000553807 RBM26Q5T8P6 1007 aaKnown RBP25.5■■□□□ 1.67
XRCC3-205ENST00000553807 AGBL3Q8NEM8 1001 aa25.5■■□□□ 1.67
XRCC3-205ENST00000553807 PASKQ96RG2 1323 aa25.5■■□□□ 1.67
XRCC3-205ENST00000553807 CD209Q9NNX6 404 aa25.5■■□□□ 1.67
XRCC3-205ENST00000553807 EGFRP00533 1210 aa25.49■■□□□ 1.67
XRCC3-205ENST00000553807 PTPN12Q05209 780 aaKnown RBP25.49■■□□□ 1.67
XRCC3-205ENST00000553807 UBE4AQ14139 1066 aa25.49■■□□□ 1.67
XRCC3-205ENST00000553807 DACT2Q5SW24 774 aa25.49■■□□□ 1.67
XRCC3-205ENST00000553807 DZIP1LQ8IYY4 767 aaKnown RBP25.49■■□□□ 1.67
XRCC3-205ENST00000553807 SIL1Q9H173 461 aa25.49■■□□□ 1.67
XRCC3-205ENST00000553807 EYA2O00167 538 aa25.48■■□□□ 1.67
XRCC3-205ENST00000553807 GTF2IP78347 998 aa25.48■■□□□ 1.67
XRCC3-205ENST00000553807 STRIP1Q5VSL9 837 aa25.48■■□□□ 1.67
XRCC3-205ENST00000553807 ITPRIPQ8IWB1 547 aa25.48■■□□□ 1.67
XRCC3-205ENST00000553807 RLBP1P12271 317 aa25.47■■□□□ 1.67
XRCC3-205ENST00000553807 KIF4BQ2VIQ3 1234 aa25.47■■□□□ 1.67
XRCC3-205ENST00000553807 TTLL5Q6EMB2 1281 aa25.47■■□□□ 1.67
XRCC3-205ENST00000553807 GMLQ99445 158 aa25.47■■□□□ 1.67
XRCC3-205ENST00000553807 GNAI2P04899 355 aa25.46■■□□□ 1.67
XRCC3-205ENST00000553807 USP17L8P0C7I0 530 aa25.46■■□□□ 1.67
XRCC3-205ENST00000553807 GYG1P46976 350 aa25.46■■□□□ 1.67
XRCC3-205ENST00000553807 VGLL2Q8N8G2 317 aa25.46■■□□□ 1.67
XRCC3-205ENST00000553807 PA2G4Q9UQ80 394 aaKnown RBP25.46■■□□□ 1.67
XRCC3-205ENST00000553807 MYO3BQ8WXR4 1341 aa25.45■■□□□ 1.66
XRCC3-205ENST00000553807 SRGAP3O43295 1099 aa25.45■■□□□ 1.66
XRCC3-205ENST00000553807 PDE8BO95263 885 aa25.45■■□□□ 1.66
XRCC3-205ENST00000553807 JAG2Q9Y219 1238 aa25.45■■□□□ 1.66
XRCC3-205ENST00000553807 TRAF5O00463 557 aa25.44■■□□□ 1.66
XRCC3-205ENST00000553807 IL1R1P14778 569 aa25.44■■□□□ 1.66
XRCC3-205ENST00000553807 ZNF280AP59817 542 aaPredicted RBP25.44■■□□□ 1.66
XRCC3-205ENST00000553807 ZC3H15Q8WU90 426 aaKnown RBP25.44■■□□□ 1.66
XRCC3-205ENST00000553807 GLIS2Q9BZE0 524 aaPredicted RBP25.44■■□□□ 1.66
XRCC3-205ENST00000553807 RCAN3Q9UKA8 241 aa25.44■■□□□ 1.66
XRCC3-205ENST00000553807 HIBADHP31937 336 aaKnown RBP25.43■■□□□ 1.66
XRCC3-205ENST00000553807 FMR1Q06787 632 aaKnown RBP eCLIP25.43■■□□□ 1.66
XRCC3-205ENST00000553807 PUM3Q15397 648 aaKnown RBP25.43■■□□□ 1.66
XRCC3-205ENST00000553807 ATG9AQ7Z3C6 839 aa25.43■■□□□ 1.66
XRCC3-205ENST00000553807 PANK1Q8TE04 598 aa25.43■■□□□ 1.66
XRCC3-205ENST00000553807 CREBZFQ9NS37 354 aa25.43■■□□□ 1.66
XRCC3-205ENST00000553807 CIAO1O76071 339 aa25.42■■□□□ 1.66
XRCC3-205ENST00000553807 VPS37DQ86XT2 251 aa25.42■■□□□ 1.66
XRCC3-205ENST00000553807 FAM84BQ96KN1 310 aaPredicted RBP25.42■■□□□ 1.66
XRCC3-205ENST00000553807 YTHDC1Q96MU7 727 aaKnown RBP25.42■■□□□ 1.66
XRCC3-205ENST00000553807 MYOZ2Q9NPC6 264 aa25.42■■□□□ 1.66
XRCC3-205ENST00000553807 PGAP2Q9UHJ9 254 aa25.42■■□□□ 1.66
XRCC3-205ENST00000553807 TMEM88BA6NKF7 163 aa25.41■■□□□ 1.66
XRCC3-205ENST00000553807 MTX1Q13505 466 aa25.41■■□□□ 1.66
XRCC3-205ENST00000553807 KIAA0825Q8IV33 1275 aa25.41■■□□□ 1.66
XRCC3-205ENST00000553807 OGFOD1Q8N543 542 aa25.41■■□□□ 1.66
XRCC3-205ENST00000553807 DNAJC5GQ8N7S2 189 aa25.41■■□□□ 1.66
XRCC3-205ENST00000553807 C1orf115Q9H7X2 142 aa25.41■■□□□ 1.66
XRCC3-205ENST00000553807 COPRSQ9NQ92 184 aa25.41■■□□□ 1.66
XRCC3-205ENST00000553807 FBXO3Q9UK99 471 aa25.41■■□□□ 1.66
XRCC3-205ENST00000553807 ASTN2O75129 1339 aaPredicted RBP25.4■■□□□ 1.66
XRCC3-205ENST00000553807 GGA3Q9NZ52 723 aa25.4■■□□□ 1.66
XRCC3-205ENST00000553807 IFIT1P09914 478 aaKnown RBP25.39■■□□□ 1.66
XRCC3-205ENST00000553807 SLC5A1P13866 664 aa25.39■■□□□ 1.66
XRCC3-205ENST00000553807 IL15P40933 162 aaPredicted RBP25.39■■□□□ 1.66
XRCC3-205ENST00000553807 CAVIN4Q5BKX8 364 aa25.39■■□□□ 1.66
XRCC3-205ENST00000553807 CERS5Q8N5B7 392 aa25.39■■□□□ 1.66
XRCC3-205ENST00000553807 KLRG1Q96E93 195 aa25.39■■□□□ 1.66
XRCC3-205ENST00000553807 CEP126Q9P2H0 1117 aa25.39■■□□□ 1.66
XRCC3-205ENST00000553807 IQSEC3Q9UPP2 1182 aaPredicted RBP25.39■■□□□ 1.66
XRCC3-205ENST00000553807 FGFR2P21802 821 aa25.38■■□□□ 1.65
XRCC3-205ENST00000553807 SCARF1Q14162 830 aa25.38■■□□□ 1.65
XRCC3-205ENST00000553807 CDC37L1Q7L3B6 337 aa25.38■■□□□ 1.65
XRCC3-205ENST00000553807 USP48Q86UV5 1035 aa25.38■■□□□ 1.65
XRCC3-205ENST00000553807 TDRD7Q8NHU6 1098 aaKnown RBP25.38■■□□□ 1.65
XRCC3-205ENST00000553807 DCPSQ96C86 337 aaKnown RBP25.38■■□□□ 1.65
XRCC3-205ENST00000553807 PNMA6EA0A0J9YXQ4 647 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms