RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 USPL1Q5W0Q7 1092 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 NYAP1Q6ZVC0 841 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 GOLGA6L1Q8N7Z2 621 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 CHAMP1Q96JM3 812 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 DCTPP1Q9H773 170 aa11.79□□□□□ -0.52
CFAP54-204ENST00000553778 DDX21Q9NR30 783 aaKnown RBP eCLIP11.79□□□□□ -0.52
CFAP54-204ENST00000553778 USP42Q9H9J4 1324 aaKnown RBP11.78□□□□□ -0.52
CFAP54-204ENST00000553778 VAMP4O75379 141 aa11.78□□□□□ -0.52
CFAP54-204ENST00000553778 SLU7O95391 586 aaKnown RBP11.78□□□□□ -0.52
CFAP54-204ENST00000553778 GYS1P13807 737 aa11.78□□□□□ -0.52
CFAP54-204ENST00000553778 ZSCAN25Q6NSZ9 544 aa11.78□□□□□ -0.52
CFAP54-204ENST00000553778 CERS3Q8IU89 383 aa11.78□□□□□ -0.52
CFAP54-204ENST00000553778 SIRT2Q8IXJ6 389 aa11.78□□□□□ -0.52
CFAP54-204ENST00000553778 IQUBQ8NA54 791 aa11.78□□□□□ -0.52
CFAP54-204ENST00000553778 CHPF2Q9P2E5 772 aa11.78□□□□□ -0.52
CFAP54-204ENST00000553778 SRP68Q9UHB9 627 aaKnown RBP11.78□□□□□ -0.52
CFAP54-204ENST00000553778 ZNF215Q9UL58 517 aaPredicted RBP11.78□□□□□ -0.52
CFAP54-204ENST00000553778 ABCC4O15439 1325 aa11.78□□□□□ -0.52
CFAP54-204ENST00000553778 MYO1CO00159 1063 aa11.78□□□□□ -0.52
CFAP54-204ENST00000553778 TPD52L1Q16890 204 aaPredicted RBP11.78□□□□□ -0.52
CFAP54-204ENST00000553778 MSL1Q68DK7 614 aa11.78□□□□□ -0.52
CFAP54-204ENST00000553778 KIF6Q6ZMV9 814 aa11.78□□□□□ -0.52
CFAP54-204ENST00000553778 STK31Q9BXU1 1019 aa11.78□□□□□ -0.52
CFAP54-204ENST00000553778 ZNF446Q9NWS9 450 aa11.78□□□□□ -0.52
CFAP54-204ENST00000553778 HYPKQ9NX55 129 aa11.78□□□□□ -0.52
CFAP54-204ENST00000553778 PSD3Q9NYI0 1048 aa11.78□□□□□ -0.52
CFAP54-204ENST00000553778 FHOD1Q9Y613 1164 aa11.78□□□□□ -0.52
CFAP54-204ENST00000553778 ANXA1P04083 346 aa11.77□□□□□ -0.53
CFAP54-204ENST00000553778 NEK4P51957 841 aa11.77□□□□□ -0.53
CFAP54-204ENST00000553778 AIMP1Q12904 312 aaKnown RBP11.77□□□□□ -0.53
CFAP54-204ENST00000553778 NAA30Q147X3 362 aaPredicted RBP11.77□□□□□ -0.53
CFAP54-204ENST00000553778 PLA2G4DQ86XP0 818 aa11.77□□□□□ -0.53
CFAP54-204ENST00000553778 UBXN6Q9BZV1 441 aa11.77□□□□□ -0.53
CFAP54-204ENST00000553778 LAMB4A4D0S4 1761 aa11.76□□□□□ -0.53
CFAP54-204ENST00000553778 CASZ1Q86V15 1759 aa11.76□□□□□ -0.53
CFAP54-204ENST00000553778 MCCP23508 829 aa11.76□□□□□ -0.53
CFAP54-204ENST00000553778 COPS6Q7L5N1 327 aa11.76□□□□□ -0.53
CFAP54-204ENST00000553778 CCDC186Q7Z3E2 898 aa11.76□□□□□ -0.53
CFAP54-204ENST00000553778 SPC24Q8NBT2 197 aa11.76□□□□□ -0.53
CFAP54-204ENST00000553778 L2HGDHQ9H9P8 463 aa11.76□□□□□ -0.53
CFAP54-204ENST00000553778 ZNF652Q9Y2D9 606 aa11.76□□□□□ -0.53
CFAP54-204ENST00000553778 CAVIN2O95810 425 aa11.76□□□□□ -0.53
CFAP54-204ENST00000553778 PROSER3Q2NL68 480 aa11.76□□□□□ -0.53
CFAP54-204ENST00000553778 NOM1Q5C9Z4 860 aaKnown RBP11.76□□□□□ -0.53
CFAP54-204ENST00000553778 CLEC4GQ6UXB4 293 aa11.76□□□□□ -0.53
CFAP54-204ENST00000553778 PPP1R1BQ9UD71 204 aaPredicted RBP11.76□□□□□ -0.53
CFAP54-204ENST00000553778 ERVV-1B6SEH8 477 aa11.75□□□□□ -0.53
CFAP54-204ENST00000553778 SMARCA5O60264 1052 aaPredicted RBP11.75□□□□□ -0.53
CFAP54-204ENST00000553778 CAMTA2O94983 1202 aa11.75□□□□□ -0.53
CFAP54-204ENST00000553778 ZRANB2O95218 330 aaKnown RBP eCLIP11.75□□□□□ -0.53
CFAP54-204ENST00000553778 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
CFAP54-204ENST00000553778 PNMA6AP0CW24 399 aaPredicted RBP11.75□□□□□ -0.53
CFAP54-204ENST00000553778 SDSP20132 328 aa11.75□□□□□ -0.53
CFAP54-204ENST00000553778 PTGER2P43116 358 aa11.75□□□□□ -0.53
CFAP54-204ENST00000553778 PTPN14Q15678 1187 aa11.75□□□□□ -0.53
CFAP54-204ENST00000553778 TTLL7Q6ZT98 887 aa11.75□□□□□ -0.53
CFAP54-204ENST00000553778 LRP10Q7Z4F1 713 aa11.75□□□□□ -0.53
CFAP54-204ENST00000553778 GOLGA5Q8TBA6 731 aa11.75□□□□□ -0.53
CFAP54-204ENST00000553778 XAGE3Q8WTP9 111 aa11.75□□□□□ -0.53
CFAP54-204ENST00000553778 PARP3Q9Y6F1 533 aa11.75□□□□□ -0.53
CFAP54-204ENST00000553778 APPP05067 770 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 ELF2Q15723 593 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 SYT10Q6XYQ8 523 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 SRLQ86TD4 932 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 SRCIN1Q9C0H9 1055 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 OSBPL3Q9H4L5 887 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 ARGLU1Q9NWB6 273 aaPredicted RBP11.74□□□□□ -0.53
CFAP54-204ENST00000553778 MAP3K15Q6ZN16 1313 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 A0A1B0GUL7 405 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 RGL2O15211 777 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 MMP10P09238 476 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 ZSCAN22P10073 491 aaPredicted RBP11.74□□□□□ -0.53
CFAP54-204ENST00000553778 PLA2G4AP47712 749 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 ZNF75DP51815 510 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 PLCB2Q00722 1185 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 FOXD4L5Q5VV16 416 aaPredicted RBP11.74□□□□□ -0.53
CFAP54-204ENST00000553778 BICDL1Q6ZP65 573 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 ANKRD13DQ6ZTN6 518 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 CEP120Q8N960 986 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 FBXO18Q8NFZ0 1043 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 TDRD7Q8NHU6 1098 aaKnown RBP11.74□□□□□ -0.53
CFAP54-204ENST00000553778 FOXD4L4Q8WXT5 416 aaPredicted RBP11.74□□□□□ -0.53
CFAP54-204ENST00000553778 SGIP1Q9BQI5 828 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 ZBTB3Q9H5J0 574 aa11.74□□□□□ -0.53
CFAP54-204ENST00000553778 PHAXQ9H814 394 aaKnown RBP11.74□□□□□ -0.53
CFAP54-204ENST00000553778 DDX58O95786 925 aaKnown RBP11.73□□□□□ -0.53
CFAP54-204ENST00000553778 TM4SF1P30408 202 aa11.73□□□□□ -0.53
CFAP54-204ENST00000553778 HLFQ16534 295 aa11.73□□□□□ -0.53
CFAP54-204ENST00000553778 ZSCAN26Q16670 478 aa11.73□□□□□ -0.53
CFAP54-204ENST00000553778 KRBA2Q6ZNG9 492 aa11.73□□□□□ -0.53
CFAP54-204ENST00000553778 FILIP1Q7Z7B0 1213 aa11.73□□□□□ -0.53
CFAP54-204ENST00000553778 SETDB2Q96T68 719 aa11.73□□□□□ -0.53
CFAP54-204ENST00000553778 SWT1Q5T5J6 900 aaKnown RBP11.72□□□□□ -0.53
CFAP54-204ENST00000553778 TBC1D9BQ66K14 1250 aa11.72□□□□□ -0.53
CFAP54-204ENST00000553778 CNKSR2Q8WXI2 1034 aa11.72□□□□□ -0.53
CFAP54-204ENST00000553778 GDPD2Q9HCC8 539 aa11.72□□□□□ -0.53
CFAP54-204ENST00000553778 ST7Q9NRC1 585 aa11.72□□□□□ -0.53
CFAP54-204ENST00000553778 C4AP0C0L4 1744 aa11.72□□□□□ -0.53
CFAP54-204ENST00000553778 LOC102724159A0A0B4J2E5 919 aa11.72□□□□□ -0.53
CFAP54-204ENST00000553778 TPM1P09493 284 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms