RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 NUCB1Q02818 461 aa22.23■■□□□ 1.15
PSEN1-208ENST00000553719 RASSF7Q02833 373 aa22.23■■□□□ 1.15
PSEN1-208ENST00000553719 SUPT20HQ8NEM7 779 aa22.23■■□□□ 1.15
PSEN1-208ENST00000553719 C6orf229H3BNL8 230 aa22.22■■□□□ 1.15
PSEN1-208ENST00000553719 TIMM10P62072 90 aa22.22■■□□□ 1.15
PSEN1-208ENST00000553719 KIAA2012Q0VF49 1180 aa22.22■■□□□ 1.15
PSEN1-208ENST00000553719 GPR162Q16538 588 aa22.22■■□□□ 1.15
PSEN1-208ENST00000553719 PELP1Q8IZL8 1130 aaKnown RBP22.22■■□□□ 1.15
PSEN1-208ENST00000553719 VPS33BQ9H267 617 aa22.22■■□□□ 1.15
PSEN1-208ENST00000553719 DBNLQ9UJU6 430 aaKnown RBP22.22■■□□□ 1.15
PSEN1-208ENST00000553719 DICER1Q9UPY3 1922 aaKnown RBP22.21■■□□□ 1.15
PSEN1-208ENST00000553719 SLC5A1P13866 664 aa22.21■■□□□ 1.15
PSEN1-208ENST00000553719 ADORA1P30542 326 aa22.21■■□□□ 1.15
PSEN1-208ENST00000553719 KCNJ4P48050 445 aa22.21■■□□□ 1.15
PSEN1-208ENST00000553719 CLASRPQ8N2M8 674 aaKnown RBP22.21■■□□□ 1.15
PSEN1-208ENST00000553719 TLR7Q9NYK1 1049 aaKnown RBP22.21■■□□□ 1.15
PSEN1-208ENST00000553719 SALL3Q9BXA9 1300 aa22.21■■□□□ 1.15
PSEN1-208ENST00000553719 CCDC88AQ3V6T2 1871 aa22.2■■□□□ 1.14
PSEN1-208ENST00000553719 ZBTB22O15209 634 aa22.2■■□□□ 1.14
PSEN1-208ENST00000553719 GRIN3BO60391 1043 aa22.2■■□□□ 1.14
PSEN1-208ENST00000553719 IFIT1P09914 478 aaKnown RBP22.2■■□□□ 1.14
PSEN1-208ENST00000553719 WASHC4Q2M389 1173 aa22.2■■□□□ 1.14
PSEN1-208ENST00000553719 ANKRD45Q5TZF3 282 aa22.2■■□□□ 1.14
PSEN1-208ENST00000553719 XAGE2Q96GT9 111 aa22.2■■□□□ 1.14
PSEN1-208ENST00000553719 FAM84BQ96KN1 310 aaPredicted RBP22.2■■□□□ 1.14
PSEN1-208ENST00000553719 EYA3Q99504 573 aa22.2■■□□□ 1.14
PSEN1-208ENST00000553719 ZNF277Q9NRM2 450 aaPredicted RBP22.2■■□□□ 1.14
PSEN1-208ENST00000553719 ZNF646O15015 1829 aaPredicted RBP22.2■■□□□ 1.14
PSEN1-208ENST00000553719 IARSP41252 1262 aaKnown RBP22.19■■□□□ 1.14
PSEN1-208ENST00000553719 ARHGAP27Q6ZUM4 889 aa22.19■■□□□ 1.14
PSEN1-208ENST00000553719 FBXO33Q7Z6M2 555 aa22.19■■□□□ 1.14
PSEN1-208ENST00000553719 AACSQ86V21 672 aa22.19■■□□□ 1.14
PSEN1-208ENST00000553719 CHD1LQ86WJ1 897 aa22.19■■□□□ 1.14
PSEN1-208ENST00000553719 DBNDD2Q9BQY9 259 aa22.19■■□□□ 1.14
PSEN1-208ENST00000553719 GTF3C3Q9Y5Q9 886 aa22.19■■□□□ 1.14
PSEN1-208ENST00000553719 AOC3Q16853 763 aa22.18■■□□□ 1.14
PSEN1-208ENST00000553719 CCDC8Q9H0W5 538 aaPredicted RBP22.18■■□□□ 1.14
PSEN1-208ENST00000553719 CHD4Q14839 1912 aa22.18■■□□□ 1.14
PSEN1-208ENST00000553719 PPIP5K2O43314 1243 aa22.17■■□□□ 1.14
PSEN1-208ENST00000553719 GYG1P46976 350 aa22.17■■□□□ 1.14
PSEN1-208ENST00000553719 ZC3H12CQ9C0D7 883 aaKnown RBP22.17■■□□□ 1.14
PSEN1-208ENST00000553719 PSME4Q14997 1843 aa22.17■■□□□ 1.14
PSEN1-208ENST00000553719 SCN9AQ15858 1988 aa22.16■■□□□ 1.14
PSEN1-208ENST00000553719 RIMBP2O15034 1052 aa22.16■■□□□ 1.14
PSEN1-208ENST00000553719 C16orf71Q8IYS4 520 aaPredicted RBP22.16■■□□□ 1.14
PSEN1-208ENST00000553719 OTUD7AQ8TE49 926 aaPredicted RBP22.16■■□□□ 1.14
PSEN1-208ENST00000553719 NEUROD6Q96NK8 337 aa22.16■■□□□ 1.14
PSEN1-208ENST00000553719 LNPKQ9C0E8 428 aa22.16■■□□□ 1.14
PSEN1-208ENST00000553719 TIAM2Q8IVF5 1701 aa22.16■■□□□ 1.14
PSEN1-208ENST00000553719 COL1A1P02452 1464 aaPredicted RBP22.15■■□□□ 1.14
PSEN1-208ENST00000553719 IL1R1P14778 569 aa22.15■■□□□ 1.14
PSEN1-208ENST00000553719 LMNB1P20700 586 aa22.15■■□□□ 1.14
PSEN1-208ENST00000553719 PHKA1P46020 1223 aa22.15■■□□□ 1.14
PSEN1-208ENST00000553719 BCAMP50895 628 aa22.15■■□□□ 1.14
PSEN1-208ENST00000553719 CCDC102BQ68D86 513 aa22.15■■□□□ 1.14
PSEN1-208ENST00000553719 AKAP11Q9UKA4 1901 aa22.14■■□□□ 1.14
PSEN1-208ENST00000553719 IFIT2P09913 472 aaKnown RBP22.14■■□□□ 1.13
PSEN1-208ENST00000553719 PDE4AP27815 886 aa22.14■■□□□ 1.13
PSEN1-208ENST00000553719 ARID4AP29374 1257 aaPredicted RBP22.14■■□□□ 1.13
PSEN1-208ENST00000553719 HIBADHP31937 336 aaKnown RBP22.14■■□□□ 1.13
PSEN1-208ENST00000553719 ZNF804AQ7Z570 1209 aa22.14■■□□□ 1.13
PSEN1-208ENST00000553719 ZNF512BQ96KM6 892 aaPredicted RBP22.14■■□□□ 1.13
PSEN1-208ENST00000553719 COA1Q9GZY4 146 aa22.14■■□□□ 1.13
PSEN1-208ENST00000553719 CAVIN4Q5BKX8 364 aa22.13■■□□□ 1.13
PSEN1-208ENST00000553719 LARGE2Q8N3Y3 721 aa22.13■■□□□ 1.13
PSEN1-208ENST00000553719 TDRD7Q8NHU6 1098 aaKnown RBP22.13■■□□□ 1.13
PSEN1-208ENST00000553719 CD209Q9NNX6 404 aa22.13■■□□□ 1.13
PSEN1-208ENST00000553719 MYH13Q9UKX3 1938 aa22.13■■□□□ 1.13
PSEN1-208ENST00000553719 YDJCA8MPS7 323 aa22.12■■□□□ 1.13
PSEN1-208ENST00000553719 ECE2O60344 883 aa22.12■■□□□ 1.13
PSEN1-208ENST00000553719 DBNDD1Q9H9R9 158 aa22.12■■□□□ 1.13
PSEN1-208ENST00000553719 DOK7Q18PE1 504 aa22.11■■□□□ 1.13
PSEN1-208ENST00000553719 PODNQ7Z5L7 613 aa22.11■■□□□ 1.13
PSEN1-208ENST00000553719 STAP2Q9UGK3 403 aa22.11■■□□□ 1.13
PSEN1-208ENST00000553719 MX1P20591 662 aa22.1■■□□□ 1.13
PSEN1-208ENST00000553719 PDS5AQ29RF7 1337 aaKnown RBP22.09■■□□□ 1.13
PSEN1-208ENST00000553719 TTC41PQ6P2S7 1318 aa22.09■■□□□ 1.13
PSEN1-208ENST00000553719 FZD9O00144 591 aa22.09■■□□□ 1.13
PSEN1-208ENST00000553719 SEMA3EO15041 775 aa22.09■■□□□ 1.13
PSEN1-208ENST00000553719 RASGRF1Q13972 1273 aa22.09■■□□□ 1.13
PSEN1-208ENST00000553719 SCARF1Q14162 830 aa22.09■■□□□ 1.13
PSEN1-208ENST00000553719 CCDC158Q5M9N0 1113 aa22.09■■□□□ 1.13
PSEN1-208ENST00000553719 PLEKHM2Q8IWE5 1019 aa22.09■■□□□ 1.13
PSEN1-208ENST00000553719 NIM1KQ8IY84 436 aa22.09■■□□□ 1.13
PSEN1-208ENST00000553719 PI4K2BQ8TCG2 481 aa22.09■■□□□ 1.13
PSEN1-208ENST00000553719 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.09■■□□□ 1.13
PSEN1-208ENST00000553719 OSBPL3Q9H4L5 887 aa22.09■■□□□ 1.13
PSEN1-208ENST00000553719 ECHDC1Q9NTX5 307 aa22.09■■□□□ 1.13
PSEN1-208ENST00000553719 ZBTB47Q9UFB7 747 aaPredicted RBP22.09■■□□□ 1.13
PSEN1-208ENST00000553719 ZNRF3Q9ULT6 936 aa22.09■■□□□ 1.13
PSEN1-208ENST00000553719 UQCRFS1P1P0C7P4 283 aa22.08■■□□□ 1.13
PSEN1-208ENST00000553719 ATP5JP18859 108 aa22.08■■□□□ 1.13
PSEN1-208ENST00000553719 MCAMP43121 646 aa22.08■■□□□ 1.13
PSEN1-208ENST00000553719 PDE1AP54750 535 aa22.08■■□□□ 1.13
PSEN1-208ENST00000553719 GORABQ5T7V8 394 aa22.08■■□□□ 1.13
PSEN1-208ENST00000553719 C9orf131Q5VYM1 1079 aa22.08■■□□□ 1.13
PSEN1-208ENST00000553719 VPS37DQ86XT2 251 aa22.08■■□□□ 1.13
PSEN1-208ENST00000553719 AOX1Q06278 1338 aa22.07■■□□□ 1.12
PSEN1-208ENST00000553719 FAM205AQ6ZU69 1335 aa22.07■■□□□ 1.12
PSEN1-208ENST00000553719 TTC39AQ5SRH9 613 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms