RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 COL4A5P29400 1685 aa17.11■□□□□ 0.33
TUBB3-202ENST00000553656 WTIPA6NIX2 430 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-202ENST00000553656 KLRK1P26718 216 aa17.11■□□□□ 0.33
TUBB3-202ENST00000553656 IRX6P78412 446 aaPredicted RBP17.11■□□□□ 0.33
TUBB3-202ENST00000553656 ATP2B3Q16720 1220 aa17.11■□□□□ 0.33
TUBB3-202ENST00000553656 CAVIN4Q5BKX8 364 aa17.11■□□□□ 0.33
TUBB3-202ENST00000553656 C15orf52Q6ZUT6 534 aaKnown RBP17.11■□□□□ 0.33
TUBB3-202ENST00000553656 VPS37DQ86XT2 251 aa17.11■□□□□ 0.33
TUBB3-202ENST00000553656 LPIN2Q92539 896 aa17.11■□□□□ 0.33
TUBB3-202ENST00000553656 NOP58Q9Y2X3 529 aaKnown RBP17.11■□□□□ 0.33
TUBB3-202ENST00000553656 GLTPD2A6NH11 291 aa17.1■□□□□ 0.33
TUBB3-202ENST00000553656 TFCP2Q12800 502 aa17.1■□□□□ 0.33
TUBB3-202ENST00000553656 PODNQ7Z5L7 613 aa17.1■□□□□ 0.33
TUBB3-202ENST00000553656 SIRT2Q8IXJ6 389 aa17.1■□□□□ 0.33
TUBB3-202ENST00000553656 EXOC6Q8TAG9 804 aa17.1■□□□□ 0.33
TUBB3-202ENST00000553656 ZNF526Q8TF50 670 aaPredicted RBP17.1■□□□□ 0.33
TUBB3-202ENST00000553656 EXOC6BQ9Y2D4 811 aa17.1■□□□□ 0.33
TUBB3-202ENST00000553656 GJA3Q9Y6H8 435 aa17.1■□□□□ 0.33
TUBB3-202ENST00000553656 ZNF541Q9H0D2 1346 aa17.1■□□□□ 0.33
TUBB3-202ENST00000553656 TNIP1Q15025 636 aa17.09■□□□□ 0.33
TUBB3-202ENST00000553656 CIAPIN1Q6FI81 312 aa17.09■□□□□ 0.33
TUBB3-202ENST00000553656 TXNRD3Q86VQ6 643 aa17.09■□□□□ 0.33
TUBB3-202ENST00000553656 RAD17O75943 681 aa17.08■□□□□ 0.32
TUBB3-202ENST00000553656 FGFR2P21802 821 aa17.08■□□□□ 0.32
TUBB3-202ENST00000553656 HIBADHP31937 336 aaKnown RBP17.08■□□□□ 0.32
TUBB3-202ENST00000553656 GPC2Q8N158 579 aa17.08■□□□□ 0.32
TUBB3-202ENST00000553656 PCDHB15Q9Y5E8 787 aa17.08■□□□□ 0.32
TUBB3-202ENST00000553656 YDJCA8MPS7 323 aa17.07■□□□□ 0.32
TUBB3-202ENST00000553656 APBB1O00213 710 aa17.07■□□□□ 0.32
TUBB3-202ENST00000553656 RAB11FIP3O75154 756 aa17.07■□□□□ 0.32
TUBB3-202ENST00000553656 FRAT2O75474 233 aaPredicted RBP17.07■□□□□ 0.32
TUBB3-202ENST00000553656 DDNO94850 711 aaPredicted RBP17.07■□□□□ 0.32
TUBB3-202ENST00000553656 GYG1P46976 350 aa17.07■□□□□ 0.32
TUBB3-202ENST00000553656 CXCL9Q07325 125 aa17.07■□□□□ 0.32
TUBB3-202ENST00000553656 FBXW7Q969H0 707 aa17.07■□□□□ 0.32
TUBB3-202ENST00000553656 GPBP1L1Q9HC44 474 aaPredicted RBP17.07■□□□□ 0.32
TUBB3-202ENST00000553656 CD209Q9NNX6 404 aa17.07■□□□□ 0.32
TUBB3-202ENST00000553656 IRS2Q9Y4H2 1338 aa17.06■□□□□ 0.32
TUBB3-202ENST00000553656 A0A1B0GUL7 405 aa17.06■□□□□ 0.32
TUBB3-202ENST00000553656 SASH1O94885 1247 aa17.06■□□□□ 0.32
TUBB3-202ENST00000553656 NEFLP07196 543 aa17.06■□□□□ 0.32
TUBB3-202ENST00000553656 GORABQ5T7V8 394 aa17.06■□□□□ 0.32
TUBB3-202ENST00000553656 KIF1BPQ96EK5 621 aa17.06■□□□□ 0.32
TUBB3-202ENST00000553656 NEUROD6Q96NK8 337 aa17.06■□□□□ 0.32
TUBB3-202ENST00000553656 ZNF609O15014 1411 aa17.05■□□□□ 0.32
TUBB3-202ENST00000553656 USP17L3A6NCW0 530 aa17.05■□□□□ 0.32
TUBB3-202ENST00000553656 USP17L4A6NCW7 530 aa17.05■□□□□ 0.32
TUBB3-202ENST00000553656 TIMM10P62072 90 aa17.05■□□□□ 0.32
TUBB3-202ENST00000553656 USP17L1Q7RTZ2 530 aa17.05■□□□□ 0.32
TUBB3-202ENST00000553656 FAM84BQ96KN1 310 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-202ENST00000553656 GPR108Q9NPR9 543 aa17.05■□□□□ 0.32
TUBB3-202ENST00000553656 GNL3LQ9NVN8 582 aaKnown RBP17.05■□□□□ 0.32
TUBB3-202ENST00000553656 PSMD14O00487 310 aa17.04■□□□□ 0.32
TUBB3-202ENST00000553656 IL1R1P14778 569 aa17.04■□□□□ 0.32
TUBB3-202ENST00000553656 LMOD1P29536 600 aaPredicted RBP17.04■□□□□ 0.32
TUBB3-202ENST00000553656 TNNI3KQ59H18 835 aa17.04■□□□□ 0.32
TUBB3-202ENST00000553656 FBXO33Q7Z6M2 555 aa17.04■□□□□ 0.32
TUBB3-202ENST00000553656 ZNF784Q8NCA9 323 aaPredicted RBP17.04■□□□□ 0.32
TUBB3-202ENST00000553656 RHPN1Q8TCX5 695 aa17.04■□□□□ 0.32
TUBB3-202ENST00000553656 FPGT-TNNI3KV9GXZ4 949 aa17.04■□□□□ 0.32
TUBB3-202ENST00000553656 IQCA1LA6NCM1 817 aa17.03■□□□□ 0.32
TUBB3-202ENST00000553656 BCAMP50895 628 aa17.03■□□□□ 0.32
TUBB3-202ENST00000553656 GTF2IP78347 998 aa17.03■□□□□ 0.32
TUBB3-202ENST00000553656 STRIP1Q5VSL9 837 aa17.03■□□□□ 0.32
TUBB3-202ENST00000553656 TTLL5Q6EMB2 1281 aa17.03■□□□□ 0.32
TUBB3-202ENST00000553656 CLASRPQ8N2M8 674 aaKnown RBP17.03■□□□□ 0.32
TUBB3-202ENST00000553656 XAGE2Q96GT9 111 aa17.03■□□□□ 0.32
TUBB3-202ENST00000553656 BCL11AQ9H165 835 aa17.03■□□□□ 0.32
TUBB3-202ENST00000553656 RWDD1Q9H446 243 aaPredicted RBP17.03■□□□□ 0.32
TUBB3-202ENST00000553656 KCNQ5Q9NR82 932 aa17.03■□□□□ 0.32
TUBB3-202ENST00000553656 ARAP2Q8WZ64 1704 aa17.02■□□□□ 0.32
TUBB3-202ENST00000553656 RPS12P25398 132 aaKnown RBP17.02■□□□□ 0.32
TUBB3-202ENST00000553656 ADORA1P30542 326 aa17.02■□□□□ 0.32
TUBB3-202ENST00000553656 HDAC1Q13547 482 aaPredicted RBP17.02■□□□□ 0.32
TUBB3-202ENST00000553656 TDRD7Q8NHU6 1098 aaKnown RBP17.02■□□□□ 0.32
TUBB3-202ENST00000553656 L3MBTL3Q96JM7 780 aaPredicted RBP17.02■□□□□ 0.32
TUBB3-202ENST00000553656 LRRCC1Q9C099 1032 aa17.02■□□□□ 0.32
TUBB3-202ENST00000553656 DCTPP1Q9H773 170 aa17.02■□□□□ 0.32
TUBB3-202ENST00000553656 IL1RAPL2Q9NP60 686 aa17.02■□□□□ 0.32
TUBB3-202ENST00000553656 ZBTB47Q9UFB7 747 aaPredicted RBP17.02■□□□□ 0.32
TUBB3-202ENST00000553656 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.02■□□□□ 0.32
TUBB3-202ENST00000553656 MYO3BQ8WXR4 1341 aa17.01■□□□□ 0.31
TUBB3-202ENST00000553656 VIL1P09327 827 aaKnown RBP17.01■□□□□ 0.31
TUBB3-202ENST00000553656 VEGFAP15692 232 aaPredicted RBP17.01■□□□□ 0.31
TUBB3-202ENST00000553656 GMPSP49915 693 aaPredicted RBP17.01■□□□□ 0.31
TUBB3-202ENST00000553656 CCDC102BQ68D86 513 aa17.01■□□□□ 0.31
TUBB3-202ENST00000553656 RSBN1LQ6PCB5 846 aaPredicted RBP17.01■□□□□ 0.31
TUBB3-202ENST00000553656 AACSQ86V21 672 aa17.01■□□□□ 0.31
TUBB3-202ENST00000553656 RRAGCQ9HB90 399 aa17.01■□□□□ 0.31
TUBB3-202ENST00000553656 NMRK2Q9NPI5 230 aa17.01■□□□□ 0.31
TUBB3-202ENST00000553656 IQSEC3Q9UPP2 1182 aaPredicted RBP17.01■□□□□ 0.31
TUBB3-202ENST00000553656 WDR90Q96KV7 1748 aa17.01■□□□□ 0.31
TUBB3-202ENST00000553656 SCN9AQ15858 1988 aa17■□□□□ 0.31
TUBB3-202ENST00000553656 SEMA3EO15041 775 aa17■□□□□ 0.31
TUBB3-202ENST00000553656 IFIT2P09913 472 aaKnown RBP17■□□□□ 0.31
TUBB3-202ENST00000553656 PHKA1P46020 1223 aa17■□□□□ 0.31
TUBB3-202ENST00000553656 CHAF1AQ13111 956 aaPredicted RBP17■□□□□ 0.31
TUBB3-202ENST00000553656 CCDC158Q5M9N0 1113 aa17■□□□□ 0.31
TUBB3-202ENST00000553656 DACT2Q5SW24 774 aa17■□□□□ 0.31
TUBB3-202ENST00000553656 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms