RNA–Protein interactions for RNA: ENST00000553490.5

NPC2-204, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-204ENST00000553490 COL1A1P02452 1464 aaPredicted RBP11.03□□□□□ -0.64
NPC2-204ENST00000553490 MYO3BQ8WXR4 1341 aa11.03□□□□□ -0.64
NPC2-204ENST00000553490 CHL1O00533 1208 aa11.02□□□□□ -0.65
NPC2-204ENST00000553490 WNT10BO00744 389 aa11.02□□□□□ -0.65
NPC2-204ENST00000553490 ALDH1A1P00352 501 aa11.02□□□□□ -0.65
NPC2-204ENST00000553490 ATP2B4P23634 1241 aa11.02□□□□□ -0.65
NPC2-204ENST00000553490 PTPN12Q05209 780 aaKnown RBP11.02□□□□□ -0.65
NPC2-204ENST00000553490 DACT2Q5SW24 774 aa11.02□□□□□ -0.65
NPC2-204ENST00000553490 SPRYD7Q5W111 196 aa11.02□□□□□ -0.65
NPC2-204ENST00000553490 OTOP1Q7RTM1 612 aa11.02□□□□□ -0.65
NPC2-204ENST00000553490 RIC3Q7Z5B4 369 aa11.02□□□□□ -0.65
NPC2-204ENST00000553490 APOBEC3FQ8IUX4 373 aaKnown RBP11.02□□□□□ -0.65
NPC2-204ENST00000553490 ANKRD18AQ8IVF6 992 aa11.02□□□□□ -0.65
NPC2-204ENST00000553490 MXD3Q9BW11 206 aa11.02□□□□□ -0.65
NPC2-204ENST00000553490 MYH3P11055 1940 aa11.01□□□□□ -0.65
NPC2-204ENST00000553490 KIAA0100Q14667 2235 aaKnown RBP11.01□□□□□ -0.65
NPC2-204ENST00000553490 PDE8AO60658 829 aa11.01□□□□□ -0.65
NPC2-204ENST00000553490 NEUROD2Q15784 382 aa11.01□□□□□ -0.65
NPC2-204ENST00000553490 INTS3Q68E01 1043 aaKnown RBP11.01□□□□□ -0.65
NPC2-204ENST00000553490 MYD88Q99836 296 aa11.01□□□□□ -0.65
NPC2-204ENST00000553490 ANGEL1Q9UNK9 670 aaKnown RBP11.01□□□□□ -0.65
NPC2-204ENST00000553490 SSC5DA1L4H1 1573 aa11□□□□□ -0.65
NPC2-204ENST00000553490 MANSC4A6NHS7 340 aaPredicted RBP11□□□□□ -0.65
NPC2-204ENST00000553490 PCCAP05165 728 aaPredicted RBP11□□□□□ -0.65
NPC2-204ENST00000553490 FXR1P51114 621 aaKnown RBP eCLIP11□□□□□ -0.65
NPC2-204ENST00000553490 CDC5LQ99459 802 aaKnown RBP11□□□□□ -0.65
NPC2-204ENST00000553490 ECM29Q5VYK3 1845 aa11□□□□□ -0.65
NPC2-204ENST00000553490 LDLRAD1Q5T700 205 aa10.99□□□□□ -0.65
NPC2-204ENST00000553490 STRIP1Q5VSL9 837 aa10.99□□□□□ -0.65
NPC2-204ENST00000553490 DUSP27Q5VZP5 1158 aa10.99□□□□□ -0.65
NPC2-204ENST00000553490 IFNL1Q8IU54 200 aa10.99□□□□□ -0.65
NPC2-204ENST00000553490 CCDC146Q8IYE0 955 aa10.99□□□□□ -0.65
NPC2-204ENST00000553490 CCDC191Q8NCU4 936 aa10.99□□□□□ -0.65
NPC2-204ENST00000553490 JARID2Q92833 1246 aaPredicted RBP10.99□□□□□ -0.65
NPC2-204ENST00000553490 ERO1AQ96HE7 468 aa10.99□□□□□ -0.65
NPC2-204ENST00000553490 CWC25Q9NXE8 425 aaPredicted RBP10.99□□□□□ -0.65
NPC2-204ENST00000553490 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.99□□□□□ -0.65
NPC2-204ENST00000553490 FZD1Q9UP38 647 aa10.99□□□□□ -0.65
NPC2-204ENST00000553490 OTOFQ9HC10 1997 aa10.98□□□□□ -0.65
NPC2-204ENST00000553490 WTIPA6NIX2 430 aaPredicted RBP10.98□□□□□ -0.65
NPC2-204ENST00000553490 IGF2BP3O00425 579 aaKnown RBP eCLIP10.98□□□□□ -0.65
NPC2-204ENST00000553490 ZBTB48P10074 688 aaPredicted RBP10.98□□□□□ -0.65
NPC2-204ENST00000553490 CTSWP56202 376 aa10.98□□□□□ -0.65
NPC2-204ENST00000553490 KIAA0825Q8IV33 1275 aa10.98□□□□□ -0.65
NPC2-204ENST00000553490 CD99L2Q8TCZ2 262 aa10.98□□□□□ -0.65
NPC2-204ENST00000553490 ARMC5Q96C12 935 aa10.98□□□□□ -0.65
NPC2-204ENST00000553490 WNK4Q96J92 1243 aa10.98□□□□□ -0.65
NPC2-204ENST00000553490 COA1Q9GZY4 146 aa10.98□□□□□ -0.65
NPC2-204ENST00000553490 CEP290O15078 2479 aa10.98□□□□□ -0.65
NPC2-204ENST00000553490 MMP14P50281 582 aa10.97□□□□□ -0.65
NPC2-204ENST00000553490 CCT4P50991 539 aaKnown RBP10.97□□□□□ -0.65
NPC2-204ENST00000553490 INHBEP58166 350 aa10.97□□□□□ -0.65
NPC2-204ENST00000553490 SLC10A4Q96EP9 437 aa10.97□□□□□ -0.65
NPC2-204ENST00000553490 CLMNQ96JQ2 1002 aa10.97□□□□□ -0.65
NPC2-204ENST00000553490 PHAXQ9H814 394 aaKnown RBP10.97□□□□□ -0.65
NPC2-204ENST00000553490 MINPP1Q9UNW1 487 aa10.97□□□□□ -0.65
NPC2-204ENST00000553490 TRIM35Q9UPQ4 493 aa10.97□□□□□ -0.65
NPC2-204ENST00000553490 PTPN22Q9Y2R2 807 aa10.97□□□□□ -0.65
NPC2-204ENST00000553490 TRIOBPQ9H2D6 2365 aa10.97□□□□□ -0.65
NPC2-204ENST00000553490 EN2P19622 333 aaPredicted RBP10.96□□□□□ -0.65
NPC2-204ENST00000553490 CRHR2Q13324 411 aa10.96□□□□□ -0.65
NPC2-204ENST00000553490 ZBED3Q96IU2 234 aaPredicted RBP10.96□□□□□ -0.65
NPC2-204ENST00000553490 DEFB129Q9H1M3 183 aa10.96□□□□□ -0.65
NPC2-204ENST00000553490 GREM2Q9H772 168 aa10.96□□□□□ -0.65
NPC2-204ENST00000553490 EFCC1Q9HA90 598 aa10.96□□□□□ -0.65
NPC2-204ENST00000553490 BSDC1Q9NW68 430 aaPredicted RBP10.96□□□□□ -0.65
NPC2-204ENST00000553490 ZNF316A6NFI3 1004 aaPredicted RBP10.95□□□□□ -0.66
NPC2-204ENST00000553490 PPP1R12BO60237 982 aaPredicted RBP10.95□□□□□ -0.66
NPC2-204ENST00000553490 KLRK1P26718 216 aa10.95□□□□□ -0.66
NPC2-204ENST00000553490 MAP3K11Q16584 847 aa10.95□□□□□ -0.66
NPC2-204ENST00000553490 TTLL5Q6EMB2 1281 aa10.95□□□□□ -0.66
NPC2-204ENST00000553490 TXNRD3Q86VQ6 643 aa10.95□□□□□ -0.66
NPC2-204ENST00000553490 METTL22Q9BUU2 404 aaPredicted RBP10.95□□□□□ -0.66
NPC2-204ENST00000553490 MBIPQ9NS73 344 aa10.95□□□□□ -0.66
NPC2-204ENST00000553490 PPP2R3BQ9Y5P8 575 aa10.95□□□□□ -0.66
NPC2-204ENST00000553490 ZNF804BA4D1E1 1349 aa10.94□□□□□ -0.66
NPC2-204ENST00000553490 SZT2Q5T011 3432 aa10.94□□□□□ -0.66
NPC2-204ENST00000553490 DDX58O95786 925 aaKnown RBP10.94□□□□□ -0.66
NPC2-204ENST00000553490 GTF2IP78347 998 aa10.94□□□□□ -0.66
NPC2-204ENST00000553490 SP3Q02447 781 aa10.94□□□□□ -0.66
NPC2-204ENST00000553490 DLGAP5Q15398 846 aa10.94□□□□□ -0.66
NPC2-204ENST00000553490 OTUD7BQ6GQQ9 843 aa10.94□□□□□ -0.66
NPC2-204ENST00000553490 TTLL11Q8NHH1 800 aa10.94□□□□□ -0.66
NPC2-204ENST00000553490 RUNDC1Q96C34 613 aa10.94□□□□□ -0.66
NPC2-204ENST00000553490 ZNF333Q96JL9 665 aa10.94□□□□□ -0.66
NPC2-204ENST00000553490 TMEM106CQ9BVX2 250 aa10.94□□□□□ -0.66
NPC2-204ENST00000553490 COLQQ9Y215 455 aaPredicted RBP10.94□□□□□ -0.66
NPC2-204ENST00000553490 LEMD3Q9Y2U8 911 aa10.94□□□□□ -0.66
NPC2-204ENST00000553490 A0A1B0GUL6 1792 aa10.94□□□□□ -0.66
NPC2-204ENST00000553490 CLRN2A0PK11 232 aa10.93□□□□□ -0.66
NPC2-204ENST00000553490 GJA5P36382 358 aa10.93□□□□□ -0.66
NPC2-204ENST00000553490 IGHMBP2P38935 993 aaKnown RBP10.93□□□□□ -0.66
NPC2-204ENST00000553490 IREB2P48200 963 aaKnown RBP10.93□□□□□ -0.66
NPC2-204ENST00000553490 WDR43Q15061 677 aaKnown RBP eCLIP10.93□□□□□ -0.66
NPC2-204ENST00000553490 SLC9C1Q4G0N8 1177 aa10.93□□□□□ -0.66
NPC2-204ENST00000553490 VEZTQ9HBM0 779 aa10.93□□□□□ -0.66
NPC2-204ENST00000553490 MAP3K2Q9Y2U5 619 aa10.93□□□□□ -0.66
NPC2-204ENST00000553490 UNCXA6NJT0 531 aa10.92□□□□□ -0.66
NPC2-204ENST00000553490 ELL2O00472 640 aaPredicted RBP10.92□□□□□ -0.66
NPC2-204ENST00000553490 MYO1BO43795 1136 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms