RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 OGFOD1Q8N543 542 aa15.16■□□□□ 0.02
HNRNPC-206ENST00000553444 MBIPQ9NS73 344 aa15.16■□□□□ 0.02
HNRNPC-206ENST00000553444 CWC25Q9NXE8 425 aaPredicted RBP15.16■□□□□ 0.02
HNRNPC-206ENST00000553444 SASH1O94885 1247 aa15.15■□□□□ 0.02
HNRNPC-206ENST00000553444 LDLRAD1Q5T700 205 aa15.15■□□□□ 0.02
HNRNPC-206ENST00000553444 STRIP1Q5VSL9 837 aa15.15■□□□□ 0.02
HNRNPC-206ENST00000553444 SPRYD7Q5W111 196 aa15.15■□□□□ 0.02
HNRNPC-206ENST00000553444 ARMC9Q7Z3E5 817 aa15.15■□□□□ 0.02
HNRNPC-206ENST00000553444 RUNDC1Q96C34 613 aa15.15■□□□□ 0.02
HNRNPC-206ENST00000553444 MINPP1Q9UNW1 487 aa15.15■□□□□ 0.02
HNRNPC-206ENST00000553444 MYO3BQ8WXR4 1341 aa15.15■□□□□ 0.02
HNRNPC-206ENST00000553444 POLR2AP24928 1970 aaKnown RBP15.15■□□□□ 0.02
HNRNPC-206ENST00000553444 CTSWP56202 376 aa15.14■□□□□ 0.01
HNRNPC-206ENST00000553444 CDC5LQ99459 802 aaKnown RBP15.14■□□□□ 0.01
HNRNPC-206ENST00000553444 COA1Q9GZY4 146 aa15.14■□□□□ 0.01
HNRNPC-206ENST00000553444 BSDC1Q9NW68 430 aaPredicted RBP15.14■□□□□ 0.01
HNRNPC-206ENST00000553444 ALDH1A1P00352 501 aa15.13■□□□□ 0.01
HNRNPC-206ENST00000553444 ZNF853P0CG23 659 aa15.13■□□□□ 0.01
HNRNPC-206ENST00000553444 MMP14P50281 582 aa15.13■□□□□ 0.01
HNRNPC-206ENST00000553444 PRKG1Q13976 671 aa15.13■□□□□ 0.01
HNRNPC-206ENST00000553444 HABP4Q5JVS0 413 aaKnown RBP15.13■□□□□ 0.01
HNRNPC-206ENST00000553444 APOBEC3FQ8IUX4 373 aaKnown RBP15.13■□□□□ 0.01
HNRNPC-206ENST00000553444 FBXW7Q969H0 707 aa15.13■□□□□ 0.01
HNRNPC-206ENST00000553444 ZBED3Q96IU2 234 aaPredicted RBP15.13■□□□□ 0.01
HNRNPC-206ENST00000553444 METTL22Q9BUU2 404 aaPredicted RBP15.13■□□□□ 0.01
HNRNPC-206ENST00000553444 AKAP11Q9UKA4 1901 aa15.13■□□□□ 0.01
HNRNPC-206ENST00000553444 HTTP42858 3142 aa15.12■□□□□ 0.01
HNRNPC-206ENST00000553444 CCT4P50991 539 aaKnown RBP15.12■□□□□ 0.01
HNRNPC-206ENST00000553444 TXNRD3Q86VQ6 643 aa15.12■□□□□ 0.01
HNRNPC-206ENST00000553444 IFNL1Q8IU54 200 aa15.12■□□□□ 0.01
HNRNPC-206ENST00000553444 TTLL11Q8NHH1 800 aa15.12■□□□□ 0.01
HNRNPC-206ENST00000553444 GREM2Q9H772 168 aa15.12■□□□□ 0.01
HNRNPC-206ENST00000553444 ANGEL1Q9UNK9 670 aaKnown RBP15.12■□□□□ 0.01
HNRNPC-206ENST00000553444 TRIM17Q9Y577 477 aa15.12■□□□□ 0.01
HNRNPC-206ENST00000553444 MKI67P46013 3256 aaKnown RBP15.11■□□□□ 0.01
HNRNPC-206ENST00000553444 POTEFA5A3E0 1075 aa15.11■□□□□ 0.01
HNRNPC-206ENST00000553444 MANSC4A6NHS7 340 aaPredicted RBP15.11■□□□□ 0.01
HNRNPC-206ENST00000553444 INTS3Q68E01 1043 aaKnown RBP15.11■□□□□ 0.01
HNRNPC-206ENST00000553444 OTOP1Q7RTM1 612 aa15.11■□□□□ 0.01
HNRNPC-206ENST00000553444 ELL2O00472 640 aaPredicted RBP15.1■□□□□ 0.01
HNRNPC-206ENST00000553444 INHBEP58166 350 aa15.1■□□□□ 0.01
HNRNPC-206ENST00000553444 MAP3K11Q16584 847 aa15.1■□□□□ 0.01
HNRNPC-206ENST00000553444 FZD1Q9UP38 647 aa15.1■□□□□ 0.01
HNRNPC-206ENST00000553444 LEMD3Q9Y2U8 911 aa15.1■□□□□ 0.01
HNRNPC-206ENST00000553444 IGF2BP3O00425 579 aaKnown RBP eCLIP15.09■□□□□ 0.01
HNRNPC-206ENST00000553444 DDX58O95786 925 aaKnown RBP15.09■□□□□ 0.01
HNRNPC-206ENST00000553444 IGKV5-2P06315 115 aa15.09■□□□□ 0.01
HNRNPC-206ENST00000553444 ZBTB48P10074 688 aaPredicted RBP15.09■□□□□ 0.01
HNRNPC-206ENST00000553444 KLRK1P26718 216 aa15.09■□□□□ 0.01
HNRNPC-206ENST00000553444 WDR43Q15061 677 aaKnown RBP eCLIP15.09■□□□□ 0.01
HNRNPC-206ENST00000553444 TTLL5Q6EMB2 1281 aa15.09■□□□□ 0.01
HNRNPC-206ENST00000553444 KIAA0825Q8IV33 1275 aa15.09■□□□□ 0.01
HNRNPC-206ENST00000553444 DEFB129Q9H1M3 183 aa15.09■□□□□ 0.01
HNRNPC-206ENST00000553444 IFT57Q9NWB7 429 aa15.09■□□□□ 0.01
HNRNPC-206ENST00000553444 ADAMTS8Q9UP79 889 aa15.09■□□□□ 0.01
HNRNPC-206ENST00000553444 MAP3K2Q9Y2U5 619 aa15.09■□□□□ 0.01
HNRNPC-206ENST00000553444 MYBBP1AQ9BQG0 1328 aaKnown RBP15.09■□□□□ 0.01
HNRNPC-206ENST00000553444 SLC10A4Q96EP9 437 aa15.08■□□□□ 0
HNRNPC-206ENST00000553444 WNK4Q96J92 1243 aa15.08■□□□□ 0
HNRNPC-206ENST00000553444 CLMNQ96JQ2 1002 aa15.08■□□□□ 0
HNRNPC-206ENST00000553444 COL1A1P02452 1464 aaPredicted RBP15.08■□□□□ 0
HNRNPC-206ENST00000553444 IGHMBP2P38935 993 aaKnown RBP15.07■□□□□ 0
HNRNPC-206ENST00000553444 GTF2IP78347 998 aa15.07■□□□□ 0
HNRNPC-206ENST00000553444 C8orf58Q8NAV2 365 aa15.07■□□□□ 0
HNRNPC-206ENST00000553444 ARMC5Q96C12 935 aa15.07■□□□□ 0
HNRNPC-206ENST00000553444 ERO1AQ96HE7 468 aa15.07■□□□□ 0
HNRNPC-206ENST00000553444 PTPN22Q9Y2R2 807 aa15.07■□□□□ 0
HNRNPC-206ENST00000553444 ZNF804BA4D1E1 1349 aa15.07■□□□□ 0
HNRNPC-206ENST00000553444 SSC5DA1L4H1 1573 aa15.07■□□□□ 0
HNRNPC-206ENST00000553444 UNCXA6NJT0 531 aa15.06■□□□□ 0
HNRNPC-206ENST00000553444 GNAI1P63096 354 aa15.06■□□□□ 0
HNRNPC-206ENST00000553444 CCDC30Q5VVM6 783 aa15.06■□□□□ 0
HNRNPC-206ENST00000553444 KSR2Q6VAB6 950 aa15.06■□□□□ 0
HNRNPC-206ENST00000553444 PPP2R3BQ9Y5P8 575 aa15.06■□□□□ 0
HNRNPC-206ENST00000553444 PI4KAP2A4QPH2 592 aa15.05■□□□□ -0
HNRNPC-206ENST00000553444 PPP1R12BO60237 982 aaPredicted RBP15.05■□□□□ -0
HNRNPC-206ENST00000553444 GJA5P36382 358 aa15.05■□□□□ -0
HNRNPC-206ENST00000553444 CRHR2Q13324 411 aa15.05■□□□□ -0
HNRNPC-206ENST00000553444 DLGAP5Q15398 846 aa15.05■□□□□ -0
HNRNPC-206ENST00000553444 CERS5Q8N5B7 392 aa15.05■□□□□ -0
HNRNPC-206ENST00000553444 PI4KAP1Q8N8J0 262 aa15.05■□□□□ -0
HNRNPC-206ENST00000553444 MTMR14Q8NCE2 650 aa15.05■□□□□ -0
HNRNPC-206ENST00000553444 CD99L2Q8TCZ2 262 aa15.05■□□□□ -0
HNRNPC-206ENST00000553444 ANKRD2Q9GZV1 360 aa15.05■□□□□ -0
HNRNPC-206ENST00000553444 PSME4Q14997 1843 aa15.05■□□□□ -0
HNRNPC-206ENST00000553444 NEURL1BA8MQ27 555 aa15.04■□□□□ -0
HNRNPC-206ENST00000553444 H7C1W4 665 aa15.04■□□□□ -0
HNRNPC-206ENST00000553444 EN2P19622 333 aaPredicted RBP15.04■□□□□ -0
HNRNPC-206ENST00000553444 FXR1P51114 621 aaKnown RBP eCLIP15.04■□□□□ -0
HNRNPC-206ENST00000553444 CAP1Q01518 475 aa15.04■□□□□ -0
HNRNPC-206ENST00000553444 CALD1Q05682 793 aaKnown RBP15.04■□□□□ -0
HNRNPC-206ENST00000553444 CWF19L2Q2TBE0 894 aaKnown RBP15.04■□□□□ -0
HNRNPC-206ENST00000553444 UBE3BQ7Z3V4 1068 aa15.04■□□□□ -0
HNRNPC-206ENST00000553444 EFCC1Q9HA90 598 aa15.04■□□□□ -0
HNRNPC-206ENST00000553444 CD209Q9NNX6 404 aa15.04■□□□□ -0
HNRNPC-206ENST00000553444 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.04■□□□□ -0
HNRNPC-206ENST00000553444 PCDHAC2Q9Y5I4 1007 aa15.04■□□□□ -0
HNRNPC-206ENST00000553444 IRS2Q9Y4H2 1338 aa15.03■□□□□ -0
HNRNPC-206ENST00000553444 ITGA6P23229 1130 aa15.03■□□□□ -0
HNRNPC-206ENST00000553444 NEXNQ0ZGT2 675 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms