RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 TRPA1O75762 1119 aa15.2■□□□□ 0.02
CKAP4-202ENST00000552828 MMP14P50281 582 aa15.2■□□□□ 0.02
CKAP4-202ENST00000552828 NEXNQ0ZGT2 675 aa15.2■□□□□ 0.02
CKAP4-202ENST00000552828 DACT2Q5SW24 774 aa15.2■□□□□ 0.02
CKAP4-202ENST00000552828 RASAL3Q86YV0 1011 aa15.2■□□□□ 0.02
CKAP4-202ENST00000552828 STK31Q9BXU1 1019 aa15.2■□□□□ 0.02
CKAP4-202ENST00000552828 POLR2AP24928 1970 aaKnown RBP15.2■□□□□ 0.02
CKAP4-202ENST00000552828 CASP8AP2Q9UKL3 1982 aa15.2■□□□□ 0.02
CKAP4-202ENST00000552828 CCT4P50991 539 aaKnown RBP15.19■□□□□ 0.02
CKAP4-202ENST00000552828 CWF19L2Q2TBE0 894 aaKnown RBP15.19■□□□□ 0.02
CKAP4-202ENST00000552828 NCBP3Q53F19 620 aaKnown RBP15.19■□□□□ 0.02
CKAP4-202ENST00000552828 STRIP1Q5VSL9 837 aa15.19■□□□□ 0.02
CKAP4-202ENST00000552828 TSR2Q969E8 191 aaKnown RBP15.19■□□□□ 0.02
CKAP4-202ENST00000552828 PLA2G12BQ9BX93 195 aa15.19■□□□□ 0.02
CKAP4-202ENST00000552828 COA1Q9GZY4 146 aa15.19■□□□□ 0.02
CKAP4-202ENST00000552828 LEMD3Q9Y2U8 911 aa15.19■□□□□ 0.02
CKAP4-202ENST00000552828 MYO3BQ8WXR4 1341 aa15.18■□□□□ 0.02
CKAP4-202ENST00000552828 NBPF9Q3BBW0 867 aa15.18■□□□□ 0.02
CKAP4-202ENST00000552828 G2E3Q7L622 706 aa15.18■□□□□ 0.02
CKAP4-202ENST00000552828 WWC1Q8IX03 1113 aa15.18■□□□□ 0.02
CKAP4-202ENST00000552828 IL16Q14005 1332 aa15.17■□□□□ 0.02
CKAP4-202ENST00000552828 PSME4Q14997 1843 aa15.17■□□□□ 0.02
CKAP4-202ENST00000552828 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
CKAP4-202ENST00000552828 CSF1RP07333 972 aa15.17■□□□□ 0.02
CKAP4-202ENST00000552828 CASP7P55210 303 aa15.17■□□□□ 0.02
CKAP4-202ENST00000552828 GCKRQ14397 625 aa15.17■□□□□ 0.02
CKAP4-202ENST00000552828 TWISTNBQ3B726 338 aaPredicted RBP15.17■□□□□ 0.02
CKAP4-202ENST00000552828 OGFOD1Q8N543 542 aa15.17■□□□□ 0.02
CKAP4-202ENST00000552828 TNRC18O15417 2968 aaPredicted RBP15.17■□□□□ 0.02
CKAP4-202ENST00000552828 PAPPA2Q9BXP8 1791 aa15.16■□□□□ 0.02
CKAP4-202ENST00000552828 WNT10BO00744 389 aa15.16■□□□□ 0.02
CKAP4-202ENST00000552828 SLC34A2O95436 690 aa15.16■□□□□ 0.02
CKAP4-202ENST00000552828 IGHMBP2P38935 993 aaKnown RBP15.16■□□□□ 0.02
CKAP4-202ENST00000552828 DIEXFQ68CQ4 756 aaKnown RBP15.16■□□□□ 0.02
CKAP4-202ENST00000552828 UBE3BQ7Z3V4 1068 aa15.16■□□□□ 0.02
CKAP4-202ENST00000552828 TXNRD3Q86VQ6 643 aa15.16■□□□□ 0.02
CKAP4-202ENST00000552828 MXD3Q9BW11 206 aa15.16■□□□□ 0.02
CKAP4-202ENST00000552828 ANKRD2Q9GZV1 360 aa15.16■□□□□ 0.02
CKAP4-202ENST00000552828 MOB2Q70IA6 237 aa15.15■□□□□ 0.02
CKAP4-202ENST00000552828 ZNF804BA4D1E1 1349 aa15.15■□□□□ 0.02
CKAP4-202ENST00000552828 UBE2Q2LH0YL09 131 aa15.14■□□□□ 0.01
CKAP4-202ENST00000552828 ITGA6P23229 1130 aa15.14■□□□□ 0.01
CKAP4-202ENST00000552828 FLIIQ13045 1269 aa15.14■□□□□ 0.01
CKAP4-202ENST00000552828 PRAMEF18Q5VWM3 479 aa15.14■□□□□ 0.01
CKAP4-202ENST00000552828 TTLL5Q6EMB2 1281 aa15.14■□□□□ 0.01
CKAP4-202ENST00000552828 CTU1Q7Z7A3 348 aaKnown RBP15.14■□□□□ 0.01
CKAP4-202ENST00000552828 ZBED3Q96IU2 234 aaPredicted RBP15.14■□□□□ 0.01
CKAP4-202ENST00000552828 SCAF8Q9UPN6 1271 aaKnown RBP15.14■□□□□ 0.01
CKAP4-202ENST00000552828 KLRK1P26718 216 aa15.13■□□□□ 0.01
CKAP4-202ENST00000552828 TM4SF4P48230 202 aa15.13■□□□□ 0.01
CKAP4-202ENST00000552828 NOM1Q5C9Z4 860 aaKnown RBP15.13■□□□□ 0.01
CKAP4-202ENST00000552828 LINS1Q8NG48 757 aa15.13■□□□□ 0.01
CKAP4-202ENST00000552828 DNAAF4Q8WXU2 420 aa15.13■□□□□ 0.01
CKAP4-202ENST00000552828 MPHOSPH8Q99549 860 aa15.13■□□□□ 0.01
CKAP4-202ENST00000552828 MYH16Q9H6N6 1097 aa15.13■□□□□ 0.01
CKAP4-202ENST00000552828 C15orf52Q6ZUT6 534 aaKnown RBP15.12■□□□□ 0.01
CKAP4-202ENST00000552828 ZNF646O15015 1829 aaPredicted RBP15.12■□□□□ 0.01
CKAP4-202ENST00000552828 IRS2Q9Y4H2 1338 aa15.12■□□□□ 0.01
CKAP4-202ENST00000552828 SASH1O94885 1247 aa15.11■□□□□ 0.01
CKAP4-202ENST00000552828 NF2P35240 595 aa15.11■□□□□ 0.01
CKAP4-202ENST00000552828 CHRNDQ07001 517 aa15.11■□□□□ 0.01
CKAP4-202ENST00000552828 APOBEC3FQ8IUX4 373 aaKnown RBP15.11■□□□□ 0.01
CKAP4-202ENST00000552828 FBXW7Q969H0 707 aa15.11■□□□□ 0.01
CKAP4-202ENST00000552828 CFHR5Q9BXR6 569 aa15.11■□□□□ 0.01
CKAP4-202ENST00000552828 HDAC9Q9UKV0 1011 aa15.11■□□□□ 0.01
CKAP4-202ENST00000552828 CCER2I3L3R5 266 aa15.1■□□□□ 0.01
CKAP4-202ENST00000552828 VAMP4O75379 141 aa15.1■□□□□ 0.01
CKAP4-202ENST00000552828 GTF2IP78347 998 aa15.1■□□□□ 0.01
CKAP4-202ENST00000552828 FKBP5Q13451 457 aaPredicted RBP15.1■□□□□ 0.01
CKAP4-202ENST00000552828 PKN2Q16513 984 aaKnown RBP15.1■□□□□ 0.01
CKAP4-202ENST00000552828 LDLRAD1Q5T700 205 aa15.1■□□□□ 0.01
CKAP4-202ENST00000552828 KIAA0825Q8IV33 1275 aa15.1■□□□□ 0.01
CKAP4-202ENST00000552828 FAM9BQ8IZU0 186 aa15.1■□□□□ 0.01
CKAP4-202ENST00000552828 MTMR14Q8NCE2 650 aa15.1■□□□□ 0.01
CKAP4-202ENST00000552828 CD209Q9NNX6 404 aa15.1■□□□□ 0.01
CKAP4-202ENST00000552828 FANCIQ9NVI1 1328 aa15.1■□□□□ 0.01
CKAP4-202ENST00000552828 MYH3P11055 1940 aa15.09■□□□□ 0.01
CKAP4-202ENST00000552828 AKAP11Q9UKA4 1901 aa15.09■□□□□ 0.01
CKAP4-202ENST00000552828 ANKRD18BA2A2Z9 1011 aa15.09■□□□□ 0.01
CKAP4-202ENST00000552828 FOXO4P98177 505 aa15.09■□□□□ 0.01
CKAP4-202ENST00000552828 PTPN12Q05209 780 aaKnown RBP15.09■□□□□ 0.01
CKAP4-202ENST00000552828 TTLL12Q14166 644 aaPredicted RBP15.09■□□□□ 0.01
CKAP4-202ENST00000552828 ARMC9Q7Z3E5 817 aa15.09■□□□□ 0.01
CKAP4-202ENST00000552828 WDR63Q8IWG1 891 aa15.09■□□□□ 0.01
CKAP4-202ENST00000552828 ZNF296Q8WUU4 475 aaPredicted RBP15.09■□□□□ 0.01
CKAP4-202ENST00000552828 TBC1D8O95759 1140 aa15.08■□□□□ 0
CKAP4-202ENST00000552828 IL1R1P14778 569 aa15.08■□□□□ 0
CKAP4-202ENST00000552828 KCNJ4P48050 445 aa15.08■□□□□ 0
CKAP4-202ENST00000552828 CERS5Q8N5B7 392 aa15.08■□□□□ 0
CKAP4-202ENST00000552828 HPS5Q9UPZ3 1129 aa15.08■□□□□ 0
CKAP4-202ENST00000552828 COL1A1P02452 1464 aaPredicted RBP15.08■□□□□ 0
CKAP4-202ENST00000552828 GPR25O00155 361 aa15.07■□□□□ 0
CKAP4-202ENST00000552828 SOX10P56693 466 aa15.07■□□□□ 0
CKAP4-202ENST00000552828 FKBP1AP62942 108 aaKnown RBP15.07■□□□□ 0
CKAP4-202ENST00000552828 SREBF2Q12772 1141 aa15.07■□□□□ 0
CKAP4-202ENST00000552828 IFIT5Q13325 482 aaKnown RBP15.07■□□□□ 0
CKAP4-202ENST00000552828 MAP3K11Q16584 847 aa15.07■□□□□ 0
CKAP4-202ENST00000552828 BEND3Q5T5X7 828 aa15.07■□□□□ 0
CKAP4-202ENST00000552828 DEFB129Q9H1M3 183 aa15.07■□□□□ 0
CKAP4-202ENST00000552828 UNCXA6NJT0 531 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms