RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 FAM177BA6PVY3 158 aa11.51□□□□□ -0.57
PRIM1-208ENST00000552590 TCERG1O14776 1098 aaKnown RBP11.51□□□□□ -0.57
PRIM1-208ENST00000552590 RAD17O75943 681 aa11.51□□□□□ -0.57
PRIM1-208ENST00000552590 SAMD7Q7Z3H4 446 aa11.51□□□□□ -0.57
PRIM1-208ENST00000552590 VSIG10Q8N0Z9 540 aa11.51□□□□□ -0.57
PRIM1-208ENST00000552590 LGR6Q9HBX8 967 aa11.51□□□□□ -0.57
PRIM1-208ENST00000552590 CDHR2Q9BYE9 1310 aa11.5□□□□□ -0.57
PRIM1-208ENST00000552590 H7C1D1 291 aa11.5□□□□□ -0.57
PRIM1-208ENST00000552590 ARMC5Q96C12 935 aa11.5□□□□□ -0.57
PRIM1-208ENST00000552590 DGAT1O75907 488 aa11.49□□□□□ -0.57
PRIM1-208ENST00000552590 EGFRP00533 1210 aa11.49□□□□□ -0.57
PRIM1-208ENST00000552590 IL6STP40189 918 aaPredicted RBP11.49□□□□□ -0.57
PRIM1-208ENST00000552590 TBC1D10BQ4KMP7 808 aaPredicted RBP11.49□□□□□ -0.57
PRIM1-208ENST00000552590 TPTE2Q6XPS3 522 aa11.49□□□□□ -0.57
PRIM1-208ENST00000552590 POLKQ9UBT6 870 aa11.49□□□□□ -0.57
PRIM1-208ENST00000552590 RAPGEFL1Q9UHV5 662 aa11.49□□□□□ -0.57
PRIM1-208ENST00000552590 LAMA2P24043 3122 aaKnown RBP11.48□□□□□ -0.57
PRIM1-208ENST00000552590 GGCXP38435 758 aa11.48□□□□□ -0.57
PRIM1-208ENST00000552590 TM4SF4P48230 202 aa11.48□□□□□ -0.57
PRIM1-208ENST00000552590 TRIM67Q6ZTA4 783 aa11.48□□□□□ -0.57
PRIM1-208ENST00000552590 AEBP1Q8IUX7 1158 aa11.48□□□□□ -0.57
PRIM1-208ENST00000552590 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.48□□□□□ -0.57
PRIM1-208ENST00000552590 DPF3Q92784 378 aa11.48□□□□□ -0.57
PRIM1-208ENST00000552590 DCPSQ96C86 337 aaKnown RBP11.48□□□□□ -0.57
PRIM1-208ENST00000552590 DDX27Q96GQ7 796 aaKnown RBP11.48□□□□□ -0.57
PRIM1-208ENST00000552590 EPAS1Q99814 870 aa11.48□□□□□ -0.57
PRIM1-208ENST00000552590 STXBP5LQ9Y2K9 1186 aa11.48□□□□□ -0.57
PRIM1-208ENST00000552590 PTPN22Q9Y2R2 807 aa11.48□□□□□ -0.57
PRIM1-208ENST00000552590 DZIP3Q86Y13 1208 aaKnown RBP11.47□□□□□ -0.57
PRIM1-208ENST00000552590 DEFB123Q8N688 67 aa11.47□□□□□ -0.57
PRIM1-208ENST00000552590 CDCA5Q96FF9 252 aa11.47□□□□□ -0.57
PRIM1-208ENST00000552590 EMILIN3Q9NT22 766 aa11.47□□□□□ -0.57
PRIM1-208ENST00000552590 MRC1P22897 1456 aa11.47□□□□□ -0.57
PRIM1-208ENST00000552590 A1BGP04217 495 aa11.46□□□□□ -0.57
PRIM1-208ENST00000552590 TNNT2P45379 298 aaPredicted RBP11.46□□□□□ -0.57
PRIM1-208ENST00000552590 TNIP1Q15025 636 aa11.46□□□□□ -0.57
PRIM1-208ENST00000552590 GRIPAP1Q4V328 841 aa11.46□□□□□ -0.57
PRIM1-208ENST00000552590 RBM26Q5T8P6 1007 aaKnown RBP11.46□□□□□ -0.57
PRIM1-208ENST00000552590 MOB2Q70IA6 237 aa11.46□□□□□ -0.57
PRIM1-208ENST00000552590 Q7L0L9 218 aa11.46□□□□□ -0.57
PRIM1-208ENST00000552590 NPM2Q86SE8 214 aaKnown RBP11.46□□□□□ -0.57
PRIM1-208ENST00000552590 PACS2Q86VP3 889 aa11.46□□□□□ -0.57
PRIM1-208ENST00000552590 LARP6Q9BRS8 491 aaKnown RBP11.46□□□□□ -0.57
PRIM1-208ENST00000552590 WTIPA6NIX2 430 aaPredicted RBP11.45□□□□□ -0.58
PRIM1-208ENST00000552590 CRY2Q49AN0 593 aa11.45□□□□□ -0.58
PRIM1-208ENST00000552590 TESK2Q96S53 571 aa11.45□□□□□ -0.58
PRIM1-208ENST00000552590 CFHR5Q9BXR6 569 aa11.45□□□□□ -0.58
PRIM1-208ENST00000552590 ERBB4Q15303 1308 aa11.45□□□□□ -0.58
PRIM1-208ENST00000552590 LOC100996750A0A140TA64 210 aa11.44□□□□□ -0.58
PRIM1-208ENST00000552590 MYCP01106 439 aaPredicted RBP11.44□□□□□ -0.58
PRIM1-208ENST00000552590 SLC4A8Q2Y0W8 1093 aa11.44□□□□□ -0.58
PRIM1-208ENST00000552590 SULF1Q8IWU6 871 aa11.44□□□□□ -0.58
PRIM1-208ENST00000552590 NKX2-3Q8TAU0 364 aa11.44□□□□□ -0.58
PRIM1-208ENST00000552590 ZNF333Q96JL9 665 aa11.44□□□□□ -0.58
PRIM1-208ENST00000552590 KRTAP4-6Q9BYQ5 205 aa11.44□□□□□ -0.58
PRIM1-208ENST00000552590 NIP7Q9Y221 180 aaKnown RBP eCLIP11.44□□□□□ -0.58
PRIM1-208ENST00000552590 UBR2Q8IWV8 1755 aa11.44□□□□□ -0.58
PRIM1-208ENST00000552590 ASTN2O75129 1339 aaPredicted RBP11.44□□□□□ -0.58
PRIM1-208ENST00000552590 PRAMEF22A3QJZ6 481 aa11.44□□□□□ -0.58
PRIM1-208ENST00000552590 UBE2Q2LH0YL09 131 aa11.44□□□□□ -0.58
PRIM1-208ENST00000552590 PPEF1O14829 653 aaPredicted RBP11.44□□□□□ -0.58
PRIM1-208ENST00000552590 RNMTO43148 476 aaKnown RBP11.44□□□□□ -0.58
PRIM1-208ENST00000552590 GTF2E1P29083 439 aaPredicted RBP11.44□□□□□ -0.58
PRIM1-208ENST00000552590 TMUB1Q9BVT8 246 aa11.44□□□□□ -0.58
PRIM1-208ENST00000552590 STK17AQ9UEE5 414 aa11.44□□□□□ -0.58
PRIM1-208ENST00000552590 CACNA1AO00555 2505 aa11.44□□□□□ -0.58
PRIM1-208ENST00000552590 PIP4K2AP48426 406 aaPredicted RBP11.43□□□□□ -0.58
PRIM1-208ENST00000552590 CLEC4GQ6UXB4 293 aa11.43□□□□□ -0.58
PRIM1-208ENST00000552590 CD99L2Q8TCZ2 262 aa11.43□□□□□ -0.58
PRIM1-208ENST00000552590 RPGRQ92834 1020 aaKnown RBP11.43□□□□□ -0.58
PRIM1-208ENST00000552590 ZNF496Q96IT1 587 aaPredicted RBP11.43□□□□□ -0.58
PRIM1-208ENST00000552590 CARD14Q9BXL6 1004 aa11.43□□□□□ -0.58
PRIM1-208ENST00000552590 VPS33BQ9H267 617 aa11.43□□□□□ -0.58
PRIM1-208ENST00000552590 GGA3Q9NZ52 723 aa11.43□□□□□ -0.58
PRIM1-208ENST00000552590 ABCC12Q96J65 1359 aa11.42□□□□□ -0.58
PRIM1-208ENST00000552590 A0A1W2PPC1 479 aa11.42□□□□□ -0.58
PRIM1-208ENST00000552590 YDJCA8MPS7 323 aa11.42□□□□□ -0.58
PRIM1-208ENST00000552590 HOXA10P31260 410 aaPredicted RBP11.42□□□□□ -0.58
PRIM1-208ENST00000552590 PLA2G5P39877 138 aa11.42□□□□□ -0.58
PRIM1-208ENST00000552590 SREBF2Q12772 1141 aa11.42□□□□□ -0.58
PRIM1-208ENST00000552590 TTC5Q8N0Z6 440 aa11.42□□□□□ -0.58
PRIM1-208ENST00000552590 LAMB4A4D0S4 1761 aa11.42□□□□□ -0.58
PRIM1-208ENST00000552590 PIEZO1Q92508 2521 aa11.42□□□□□ -0.58
PRIM1-208ENST00000552590 FKBP1BP68106 108 aa11.41□□□□□ -0.58
PRIM1-208ENST00000552590 CAP1Q01518 475 aa11.41□□□□□ -0.58
PRIM1-208ENST00000552590 MFSD10Q14728 455 aa11.41□□□□□ -0.58
PRIM1-208ENST00000552590 NUTM1Q86Y26 1132 aa11.41□□□□□ -0.58
PRIM1-208ENST00000552590 DPF2Q92785 391 aa11.41□□□□□ -0.58
PRIM1-208ENST00000552590 EFCC1Q9HA90 598 aa11.41□□□□□ -0.58
PRIM1-208ENST00000552590 MTMR10Q9NXD2 777 aa11.41□□□□□ -0.58
PRIM1-208ENST00000552590 ZNF652Q9Y2D9 606 aa11.41□□□□□ -0.58
PRIM1-208ENST00000552590 SULT6B1Q6IMI4 303 aa11.4□□□□□ -0.58
PRIM1-208ENST00000552590 ERO1AQ96HE7 468 aa11.4□□□□□ -0.58
PRIM1-208ENST00000552590 TEX13AQ9BXU3 409 aaPredicted RBP11.4□□□□□ -0.58
PRIM1-208ENST00000552590 HEG1Q9ULI3 1381 aa11.4□□□□□ -0.58
PRIM1-208ENST00000552590 PSMD14O00487 310 aa11.39□□□□□ -0.59
PRIM1-208ENST00000552590 KIAA2012Q0VF49 1180 aa11.39□□□□□ -0.59
PRIM1-208ENST00000552590 FAM122AQ96E09 287 aa11.39□□□□□ -0.59
PRIM1-208ENST00000552590 SIN3AQ96ST3 1273 aa11.39□□□□□ -0.59
PRIM1-208ENST00000552590 RTFDC1Q9BY42 306 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms