RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 SMG9Q9H0W8 520 aaKnown RBP5.87□□□□□ -1.47
USP44-208ENST00000552440 ZFATQ9P243 1243 aa5.87□□□□□ -1.47
USP44-208ENST00000552440 GRIK5Q16478 980 aa5.86□□□□□ -1.47
USP44-208ENST00000552440 MICAL1Q8TDZ2 1067 aa5.86□□□□□ -1.47
USP44-208ENST00000552440 COL26A1Q96A83 441 aa5.86□□□□□ -1.47
USP44-208ENST00000552440 PRIMPOLQ96LW4 560 aa5.86□□□□□ -1.47
USP44-208ENST00000552440 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
USP44-208ENST00000552440 RNF112Q9ULX5 631 aa5.86□□□□□ -1.47
USP44-208ENST00000552440 FNDC3AQ9Y2H6 1198 aaKnown RBP5.86□□□□□ -1.47
USP44-208ENST00000552440 PPME1Q9Y570 386 aa5.86□□□□□ -1.47
USP44-208ENST00000552440 LOC102724428A0A0B4J2F2 783 aa5.85□□□□□ -1.47
USP44-208ENST00000552440 H3BRB1 525 aa5.85□□□□□ -1.47
USP44-208ENST00000552440 ICMTO60725 284 aa5.85□□□□□ -1.47
USP44-208ENST00000552440 ABL1P00519 1130 aa5.85□□□□□ -1.47
USP44-208ENST00000552440 NEFLP07196 543 aa5.85□□□□□ -1.47
USP44-208ENST00000552440 IREB2P48200 963 aaKnown RBP5.85□□□□□ -1.47
USP44-208ENST00000552440 SIK1P57059 783 aa5.85□□□□□ -1.47
USP44-208ENST00000552440 ZNF211Q13398 564 aaPredicted RBP5.85□□□□□ -1.47
USP44-208ENST00000552440 DPH6Q7L8W6 267 aa5.85□□□□□ -1.47
USP44-208ENST00000552440 CMTR1Q8N1G2 835 aaKnown RBP5.85□□□□□ -1.47
USP44-208ENST00000552440 TUT1Q9H6E5 874 aaKnown RBP5.85□□□□□ -1.47
USP44-208ENST00000552440 AKTIPQ9H8T0 292 aa5.85□□□□□ -1.47
USP44-208ENST00000552440 ZBTB42B2RXF5 422 aa5.85□□□□□ -1.47
USP44-208ENST00000552440 GSC2O15499 205 aa5.85□□□□□ -1.47
USP44-208ENST00000552440 IRX6P78412 446 aaPredicted RBP5.85□□□□□ -1.47
USP44-208ENST00000552440 ECM1Q16610 540 aa5.85□□□□□ -1.47
USP44-208ENST00000552440 FBXO33Q7Z6M2 555 aa5.85□□□□□ -1.47
USP44-208ENST00000552440 TREML1Q86YW5 311 aa5.85□□□□□ -1.47
USP44-208ENST00000552440 PIK3R5Q8WYR1 880 aa5.85□□□□□ -1.47
USP44-208ENST00000552440 PLD4Q96BZ4 506 aa5.85□□□□□ -1.47
USP44-208ENST00000552440 MYH16Q9H6N6 1097 aa5.85□□□□□ -1.47
USP44-208ENST00000552440 DLL1O00548 723 aa5.84□□□□□ -1.47
USP44-208ENST00000552440 OPLAHO14841 1288 aa5.84□□□□□ -1.47
USP44-208ENST00000552440 FOXD4L6Q3SYB3 417 aaPredicted RBP5.84□□□□□ -1.47
USP44-208ENST00000552440 ZNF326Q5BKZ1 582 aaKnown RBP5.84□□□□□ -1.47
USP44-208ENST00000552440 FOXD4L3Q6VB84 417 aaPredicted RBP5.84□□□□□ -1.47
USP44-208ENST00000552440 NLRP13Q86W25 1043 aa5.84□□□□□ -1.47
USP44-208ENST00000552440 ANO2Q9NQ90 1003 aa5.84□□□□□ -1.47
USP44-208ENST00000552440 FAM177BA6PVY3 158 aa5.83□□□□□ -1.48
USP44-208ENST00000552440 HYAL3O43820 417 aaPredicted RBP5.83□□□□□ -1.48
USP44-208ENST00000552440 PTCD1O75127 700 aaKnown RBP5.83□□□□□ -1.48
USP44-208ENST00000552440 GRNP28799 593 aaKnown RBP5.83□□□□□ -1.48
USP44-208ENST00000552440 NOS3P29474 1203 aa5.83□□□□□ -1.48
USP44-208ENST00000552440 GLYCTKQ8IVS8 523 aa5.83□□□□□ -1.48
USP44-208ENST00000552440 EXOC8Q8IYI6 725 aa5.83□□□□□ -1.48
USP44-208ENST00000552440 SPACA7Q96KW9 195 aa5.83□□□□□ -1.48
USP44-208ENST00000552440 RAB11FIP3O75154 756 aa5.83□□□□□ -1.48
USP44-208ENST00000552440 TAGLNQ01995 201 aaKnown RBP5.83□□□□□ -1.48
USP44-208ENST00000552440 MLLT1Q03111 559 aaPredicted RBP5.83□□□□□ -1.48
USP44-208ENST00000552440 PRR23CQ6ZRP0 262 aa5.83□□□□□ -1.48
USP44-208ENST00000552440 RGL4Q8IZJ4 473 aa5.83□□□□□ -1.48
USP44-208ENST00000552440 IL22RA1Q8N6P7 574 aa5.83□□□□□ -1.48
USP44-208ENST00000552440 GTF3C2Q8WUA4 911 aaPredicted RBP5.83□□□□□ -1.48
USP44-208ENST00000552440 ASB16Q96NS5 453 aa5.83□□□□□ -1.48
USP44-208ENST00000552440 SEPT3Q9UH03 358 aa5.83□□□□□ -1.48
USP44-208ENST00000552440 SUGT1Q9Y2Z0 365 aa5.83□□□□□ -1.48
USP44-208ENST00000552440 RECKO95980 971 aa5.82□□□□□ -1.48
USP44-208ENST00000552440 C16orf46Q6P387 395 aa5.82□□□□□ -1.48
USP44-208ENST00000552440 NOP9Q86U38 636 aaKnown RBP5.82□□□□□ -1.48
USP44-208ENST00000552440 DZIP1LQ8IYY4 767 aaKnown RBP5.82□□□□□ -1.48
USP44-208ENST00000552440 TPD52L2O43399 206 aaKnown RBP5.81□□□□□ -1.48
USP44-208ENST00000552440 LGR5O75473 907 aa5.81□□□□□ -1.48
USP44-208ENST00000552440 RPLP1P05386 114 aaKnown RBP5.81□□□□□ -1.48
USP44-208ENST00000552440 MAPK1P28482 360 aa5.81□□□□□ -1.48
USP44-208ENST00000552440 ARHGAP4P98171 946 aa5.81□□□□□ -1.48
USP44-208ENST00000552440 HYAL2Q12891 473 aa5.81□□□□□ -1.48
USP44-208ENST00000552440 COX20Q5RI15 118 aa5.81□□□□□ -1.48
USP44-208ENST00000552440 CEP41Q9BYV8 373 aa5.81□□□□□ -1.48
USP44-208ENST00000552440 DCTN4Q9UJW0 460 aa5.81□□□□□ -1.48
USP44-208ENST00000552440 MMP20O60882 483 aa5.81□□□□□ -1.48
USP44-208ENST00000552440 DEAF1O75398 565 aaPredicted RBP5.81□□□□□ -1.48
USP44-208ENST00000552440 SMNDC1O75940 238 aaKnown RBP eCLIP5.81□□□□□ -1.48
USP44-208ENST00000552440 TTC39BQ5VTQ0 682 aaPredicted RBP5.81□□□□□ -1.48
USP44-208ENST00000552440 FAM117BQ6P1L5 589 aa5.81□□□□□ -1.48
USP44-208ENST00000552440 CAPN12Q6ZSI9 719 aa5.81□□□□□ -1.48
USP44-208ENST00000552440 HFE2Q6ZVN8 426 aa5.81□□□□□ -1.48
USP44-208ENST00000552440 LRFN2Q9ULH4 789 aa5.81□□□□□ -1.48
USP44-208ENST00000552440 TMA7Q9Y2S6 64 aaKnown RBP5.81□□□□□ -1.48
USP44-208ENST00000552440 FKBP4Q02790 459 aaKnown RBP eCLIP5.8□□□□□ -1.48
USP44-208ENST00000552440 SF3B2Q13435 895 aaKnown RBP5.8□□□□□ -1.48
USP44-208ENST00000552440 FKBP5Q13451 457 aaPredicted RBP5.8□□□□□ -1.48
USP44-208ENST00000552440 GORABQ5T7V8 394 aa5.8□□□□□ -1.48
USP44-208ENST00000552440 GDF6Q6KF10 455 aaPredicted RBP5.8□□□□□ -1.48
USP44-208ENST00000552440 MKNK1Q9BUB5 465 aa5.8□□□□□ -1.48
USP44-208ENST00000552440 KCNMB2Q9Y691 235 aa5.8□□□□□ -1.48
USP44-208ENST00000552440 UBAP1LF5GYI3 381 aa5.79□□□□□ -1.48
USP44-208ENST00000552440 F8W735 103 aaPredicted RBP5.79□□□□□ -1.48
USP44-208ENST00000552440 MTMR3Q13615 1198 aa5.79□□□□□ -1.48
USP44-208ENST00000552440 COL19A1Q14993 1142 aa5.79□□□□□ -1.48
USP44-208ENST00000552440 ABTB2Q8N961 1025 aa5.79□□□□□ -1.48
USP44-208ENST00000552440 MEGF10Q96KG7 1140 aa5.79□□□□□ -1.48
USP44-208ENST00000552440 SLC52A1Q9NWF4 448 aa5.79□□□□□ -1.48
USP44-208ENST00000552440 SBNO2Q9Y2G9 1366 aa5.79□□□□□ -1.48
USP44-208ENST00000552440 J3QW42 95 aa5.78□□□□□ -1.48
USP44-208ENST00000552440 FSTP19883 344 aa5.78□□□□□ -1.48
USP44-208ENST00000552440 ERCC5P28715 1186 aaPredicted RBP5.78□□□□□ -1.48
USP44-208ENST00000552440 UVSSAQ2YD98 709 aa5.78□□□□□ -1.48
USP44-208ENST00000552440 ZSCAN29Q8IWY8 852 aaPredicted RBP5.78□□□□□ -1.48
USP44-208ENST00000552440 OR13H1Q8NG92 308 aa5.78□□□□□ -1.48
USP44-208ENST00000552440 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms