RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 WFS1O76024 890 aa7.28□□□□□ -1.24
HOXB3-213ENST00000552000 CELF2O95319 508 aaKnown RBP7.28□□□□□ -1.24
HOXB3-213ENST00000552000 PIP4K2AP48426 406 aaPredicted RBP7.28□□□□□ -1.24
HOXB3-213ENST00000552000 SCNN1DP51172 638 aa7.28□□□□□ -1.24
HOXB3-213ENST00000552000 EIF6P56537 245 aaKnown RBP7.28□□□□□ -1.24
HOXB3-213ENST00000552000 SOX10P56693 466 aa7.28□□□□□ -1.24
HOXB3-213ENST00000552000 CIAPIN1Q6FI81 312 aa7.28□□□□□ -1.24
HOXB3-213ENST00000552000 ZNF790Q6PG37 636 aa7.28□□□□□ -1.24
HOXB3-213ENST00000552000 STK17AQ9UEE5 414 aa7.28□□□□□ -1.24
HOXB3-213ENST00000552000 ARIH1Q9Y4X5 557 aaPredicted RBP7.28□□□□□ -1.24
HOXB3-213ENST00000552000 COL4A5P29400 1685 aa7.28□□□□□ -1.24
HOXB3-213ENST00000552000 KLRG2A4D1S0 409 aaPredicted RBP7.27□□□□□ -1.25
HOXB3-213ENST00000552000 ADH1BP00325 375 aa7.27□□□□□ -1.25
HOXB3-213ENST00000552000 DNAJB2P25686 324 aa7.27□□□□□ -1.25
HOXB3-213ENST00000552000 TEFQ10587 303 aa7.27□□□□□ -1.25
HOXB3-213ENST00000552000 FOXC1Q12948 553 aa7.27□□□□□ -1.25
HOXB3-213ENST00000552000 SAPCD2Q86UD0 394 aa7.27□□□□□ -1.25
HOXB3-213ENST00000552000 LARGE2Q8N3Y3 721 aa7.27□□□□□ -1.25
HOXB3-213ENST00000552000 ZIC5Q96T25 663 aa7.27□□□□□ -1.25
HOXB3-213ENST00000552000 PSMD1Q99460 953 aa7.27□□□□□ -1.25
HOXB3-213ENST00000552000 MKI67P46013 3256 aaKnown RBP7.27□□□□□ -1.25
HOXB3-213ENST00000552000 AKAP11Q9UKA4 1901 aa7.27□□□□□ -1.25
HOXB3-213ENST00000552000 KCNQ3O43525 872 aa7.26□□□□□ -1.25
HOXB3-213ENST00000552000 ACTN4O43707 911 aaKnown RBP7.26□□□□□ -1.25
HOXB3-213ENST00000552000 NR1I2O75469 434 aa7.26□□□□□ -1.25
HOXB3-213ENST00000552000 ALDH1B1P30837 517 aa7.26□□□□□ -1.25
HOXB3-213ENST00000552000 BRPF1P55201 1214 aaPredicted RBP7.26□□□□□ -1.25
HOXB3-213ENST00000552000 TPRNQ4KMQ1 711 aa7.26□□□□□ -1.25
HOXB3-213ENST00000552000 CLEC4GQ6UXB4 293 aa7.26□□□□□ -1.25
HOXB3-213ENST00000552000 TPTE2Q6XPS3 522 aa7.26□□□□□ -1.25
HOXB3-213ENST00000552000 USP50Q70EL3 339 aaPredicted RBP7.26□□□□□ -1.25
HOXB3-213ENST00000552000 IL17REQ8NFR9 667 aa7.26□□□□□ -1.25
HOXB3-213ENST00000552000 FMNL2Q96PY5 1086 aa7.26□□□□□ -1.25
HOXB3-213ENST00000552000 GLIS2Q9BZE0 524 aaPredicted RBP7.26□□□□□ -1.25
HOXB3-213ENST00000552000 SLC6A16Q9GZN6 736 aa7.26□□□□□ -1.25
HOXB3-213ENST00000552000 NPDC1Q9NQX5 325 aaPredicted RBP7.26□□□□□ -1.25
HOXB3-213ENST00000552000 NIP7Q9Y221 180 aaKnown RBP eCLIP7.26□□□□□ -1.25
HOXB3-213ENST00000552000 SIPA1L3O60292 1781 aaPredicted RBP7.25□□□□□ -1.25
HOXB3-213ENST00000552000 CFHP08603 1231 aa7.25□□□□□ -1.25
HOXB3-213ENST00000552000 GTF2E1P29083 439 aaPredicted RBP7.25□□□□□ -1.25
HOXB3-213ENST00000552000 INSM1Q01101 510 aaPredicted RBP7.25□□□□□ -1.25
HOXB3-213ENST00000552000 PRPF38BQ5VTL8 546 aaKnown RBP7.25□□□□□ -1.25
HOXB3-213ENST00000552000 SLC51AQ86UW1 340 aa7.25□□□□□ -1.25
HOXB3-213ENST00000552000 ZNF408Q9H9D4 720 aa7.25□□□□□ -1.25
HOXB3-213ENST00000552000 ZNF652Q9Y2D9 606 aa7.25□□□□□ -1.25
HOXB3-213ENST00000552000 USP16Q9Y5T5 823 aa7.25□□□□□ -1.25
HOXB3-213ENST00000552000 SNED1Q8TER0 1413 aa7.25□□□□□ -1.25
HOXB3-213ENST00000552000 PRAMEF22A3QJZ6 481 aa7.24□□□□□ -1.25
HOXB3-213ENST00000552000 GNAT3A8MTJ3 354 aa7.24□□□□□ -1.25
HOXB3-213ENST00000552000 TCERG1O14776 1098 aaKnown RBP7.24□□□□□ -1.25
HOXB3-213ENST00000552000 AXIN1O15169 862 aa7.24□□□□□ -1.25
HOXB3-213ENST00000552000 CC2D2BQ6DHV5 1058 aa7.24□□□□□ -1.25
HOXB3-213ENST00000552000 NIM1KQ8IY84 436 aa7.24□□□□□ -1.25
HOXB3-213ENST00000552000 CRIPAKQ8N1N5 446 aa7.24□□□□□ -1.25
HOXB3-213ENST00000552000 ADARB2Q9NS39 739 aaKnown RBP7.24□□□□□ -1.25
HOXB3-213ENST00000552000 KNSTRNQ9Y448 316 aa7.24□□□□□ -1.25
HOXB3-213ENST00000552000 ABCC12Q96J65 1359 aa7.23□□□□□ -1.25
HOXB3-213ENST00000552000 PPIP5K2O43314 1243 aa7.23□□□□□ -1.25
HOXB3-213ENST00000552000 GMPSP49915 693 aaPredicted RBP7.23□□□□□ -1.25
HOXB3-213ENST00000552000 HUNKP57058 714 aa7.23□□□□□ -1.25
HOXB3-213ENST00000552000 NOGQ13253 232 aa7.23□□□□□ -1.25
HOXB3-213ENST00000552000 HLFQ16534 295 aa7.23□□□□□ -1.25
HOXB3-213ENST00000552000 NUTM1Q86Y26 1132 aa7.23□□□□□ -1.25
HOXB3-213ENST00000552000 RPGRQ92834 1020 aaKnown RBP7.23□□□□□ -1.25
HOXB3-213ENST00000552000 HHIPL1Q96JK4 782 aa7.23□□□□□ -1.25
HOXB3-213ENST00000552000 GPRC5DQ9NZD1 345 aa7.23□□□□□ -1.25
HOXB3-213ENST00000552000 DAXXQ9UER7 740 aaPredicted RBP7.23□□□□□ -1.25
HOXB3-213ENST00000552000 NUP98P52948 1817 aa7.22□□□□□ -1.25
HOXB3-213ENST00000552000 BTBD11A6QL63 1104 aa7.22□□□□□ -1.25
HOXB3-213ENST00000552000 DIAPH1O60610 1272 aaKnown RBP7.22□□□□□ -1.25
HOXB3-213ENST00000552000 CXCL9Q07325 125 aa7.22□□□□□ -1.25
HOXB3-213ENST00000552000 AOC3Q16853 763 aa7.22□□□□□ -1.25
HOXB3-213ENST00000552000 CRY2Q49AN0 593 aa7.22□□□□□ -1.25
HOXB3-213ENST00000552000 NBPF10Q6P3W6 841 aaKnown RBP7.22□□□□□ -1.25
HOXB3-213ENST00000552000 DLK2Q6UY11 383 aa7.22□□□□□ -1.25
HOXB3-213ENST00000552000 NBPF15Q8N660 670 aa7.22□□□□□ -1.25
HOXB3-213ENST00000552000 GAS2L2Q8NHY3 880 aa7.22□□□□□ -1.25
HOXB3-213ENST00000552000 TRPM4Q8TD43 1214 aa7.22□□□□□ -1.25
HOXB3-213ENST00000552000 TMEM134Q9H6X4 195 aa7.22□□□□□ -1.25
HOXB3-213ENST00000552000 GMPR2Q9P2T1 348 aaKnown RBP7.22□□□□□ -1.25
HOXB3-213ENST00000552000 NPC1L1Q9UHC9 1359 aa7.21□□□□□ -1.25
HOXB3-213ENST00000552000 U2SURPO15042 1029 aaKnown RBP7.21□□□□□ -1.26
HOXB3-213ENST00000552000 TRPA1O75762 1119 aa7.21□□□□□ -1.26
HOXB3-213ENST00000552000 SNRPA1P09661 255 aaKnown RBP7.21□□□□□ -1.26
HOXB3-213ENST00000552000 HOXA10P31260 410 aaPredicted RBP7.21□□□□□ -1.26
HOXB3-213ENST00000552000 HIRAP54198 1017 aaPredicted RBP7.21□□□□□ -1.26
HOXB3-213ENST00000552000 PLA2G2CQ5R387 149 aa7.21□□□□□ -1.26
HOXB3-213ENST00000552000 CDC37L1Q7L3B6 337 aa7.21□□□□□ -1.26
HOXB3-213ENST00000552000 USP48Q86UV5 1035 aa7.21□□□□□ -1.26
HOXB3-213ENST00000552000 CYP4X1Q8N118 509 aa7.21□□□□□ -1.26
HOXB3-213ENST00000552000 BCL2L13Q9BXK5 485 aa7.21□□□□□ -1.26
HOXB3-213ENST00000552000 NYXQ9GZU5 481 aa7.21□□□□□ -1.26
HOXB3-213ENST00000552000 PKD2L1Q9P0L9 805 aa7.21□□□□□ -1.26
HOXB3-213ENST00000552000 PGAP2Q9UHJ9 254 aa7.21□□□□□ -1.26
HOXB3-213ENST00000552000 HTTP42858 3142 aa7.21□□□□□ -1.26
HOXB3-213ENST00000552000 CEMIPQ8WUJ3 1361 aa7.2□□□□□ -1.26
HOXB3-213ENST00000552000 CENPFP49454 3210 aa7.2□□□□□ -1.26
HOXB3-213ENST00000552000 SHTN1A0MZ66 631 aa7.2□□□□□ -1.26
HOXB3-213ENST00000552000 RAD17O75943 681 aa7.2□□□□□ -1.26
HOXB3-213ENST00000552000 HSPA5P11021 654 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 360.2 ms