RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 GOLGA6L4A6NEF3 574 aa6.35□□□□□ -1.39
CCNT1-204ENST00000551989 FIBPO43427 364 aa6.35□□□□□ -1.39
CCNT1-204ENST00000551989 EVI5O60447 810 aa6.35□□□□□ -1.39
CCNT1-204ENST00000551989 GADD45BO75293 160 aaPredicted RBP6.35□□□□□ -1.39
CCNT1-204ENST00000551989 ADCY5O95622 1261 aa6.35□□□□□ -1.39
CCNT1-204ENST00000551989 GCP02774 474 aa6.35□□□□□ -1.39
CCNT1-204ENST00000551989 CDC25BP30305 580 aa6.35□□□□□ -1.39
CCNT1-204ENST00000551989 XPCQ01831 940 aaPredicted RBP6.35□□□□□ -1.39
CCNT1-204ENST00000551989 NMIQ13287 307 aaPredicted RBP6.35□□□□□ -1.39
CCNT1-204ENST00000551989 NOLC1Q14978 699 aaKnown RBP eCLIP6.35□□□□□ -1.39
CCNT1-204ENST00000551989 NOL8Q76FK4 1167 aaKnown RBP6.35□□□□□ -1.39
CCNT1-204ENST00000551989 FBXL16Q8N461 479 aa6.35□□□□□ -1.39
CCNT1-204ENST00000551989 RNF214Q8ND24 703 aa6.35□□□□□ -1.39
CCNT1-204ENST00000551989 ANKRD24Q8TF21 1146 aa6.35□□□□□ -1.39
CCNT1-204ENST00000551989 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.35□□□□□ -1.39
CCNT1-204ENST00000551989 ZDHHC16Q969W1 377 aa6.35□□□□□ -1.39
CCNT1-204ENST00000551989 ADAM33Q9BZ11 813 aa6.35□□□□□ -1.39
CCNT1-204ENST00000551989 IL25Q9H293 177 aa6.35□□□□□ -1.39
CCNT1-204ENST00000551989 LGR6Q9HBX8 967 aa6.35□□□□□ -1.39
CCNT1-204ENST00000551989 C1orf167Q5SNV9 1468 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 KDM6AO15550 1401 aaPredicted RBP6.34□□□□□ -1.39
CCNT1-204ENST00000551989 ABCA3Q99758 1704 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 SHANK3Q9BYB0 1731 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 VPS37CA5D8V6 355 aaPredicted RBP6.34□□□□□ -1.39
CCNT1-204ENST00000551989 NEURL1BA8MQ27 555 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 SASH1O94885 1247 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 HCLS1P14317 486 aaPredicted RBP6.34□□□□□ -1.39
CCNT1-204ENST00000551989 TATP17735 454 aaPredicted RBP6.34□□□□□ -1.39
CCNT1-204ENST00000551989 CEBPAP49715 358 aaPredicted RBP6.34□□□□□ -1.39
CCNT1-204ENST00000551989 PTPN5P54829 565 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 PTH1RQ03431 593 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 DNM1Q05193 864 aaKnown RBP6.34□□□□□ -1.39
CCNT1-204ENST00000551989 GCKRQ14397 625 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 ME3Q16798 604 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 DNTTIP2Q5QJE6 756 aaKnown RBP6.34□□□□□ -1.39
CCNT1-204ENST00000551989 FOXD4L5Q5VV16 416 aaPredicted RBP6.34□□□□□ -1.39
CCNT1-204ENST00000551989 NAA16Q6N069 864 aaPredicted RBP6.34□□□□□ -1.39
CCNT1-204ENST00000551989 ZNF790Q6PG37 636 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 RIC3Q7Z5B4 369 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 IFNL2Q8IZJ0 200 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 USHBP1Q8N6Y0 703 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 TDRD7Q8NHU6 1098 aaKnown RBP6.34□□□□□ -1.39
CCNT1-204ENST00000551989 FOXD4L4Q8WXT5 416 aaPredicted RBP6.34□□□□□ -1.39
CCNT1-204ENST00000551989 RAPGEF4Q8WZA2 1011 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 GTF3C6Q969F1 213 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 SUCLG2Q96I99 432 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 SPATA32Q96LK8 384 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 DSCC1Q9BVC3 393 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 TNMDQ9H2S6 317 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 CLSTN2Q9H4D0 955 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 BICC1Q9H694 974 aaKnown RBP6.34□□□□□ -1.39
CCNT1-204ENST00000551989 SLC52A2Q9HAB3 445 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 HELLSQ9NRZ9 838 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 ATG3Q9NT62 314 aa6.34□□□□□ -1.39
CCNT1-204ENST00000551989 ECM29Q5VYK3 1845 aa6.34□□□□□ -1.4
CCNT1-204ENST00000551989 C4AP0C0L4 1744 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 C4BP0C0L5 1744 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 CPDO75976 1380 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 WDR19Q8NEZ3 1342 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 KIF2AO00139 706 aaPredicted RBP6.33□□□□□ -1.4
CCNT1-204ENST00000551989 LARGE1O95461 756 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 MAP4K4O95819 1239 aaPredicted RBP6.33□□□□□ -1.4
CCNT1-204ENST00000551989 TUBB4AP04350 444 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 SNRPA1P09661 255 aaKnown RBP6.33□□□□□ -1.4
CCNT1-204ENST00000551989 TYRO3Q06418 890 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 ADCK5Q3MIX3 580 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 MCMDC2Q4G0Z9 681 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 ESCO1Q5FWF5 840 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 SARM1Q6SZW1 724 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 MPRIPQ6WCQ1 1025 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 TTC6Q86TZ1 520 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 SMAP1Q8IYB5 467 aaPredicted RBP6.33□□□□□ -1.4
CCNT1-204ENST00000551989 TTC5Q8N0Z6 440 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 SMARCC2Q8TAQ2 1214 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 KIAA1524Q8TCG1 905 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 EAF2Q96CJ1 260 aaPredicted RBP6.33□□□□□ -1.4
CCNT1-204ENST00000551989 DCAF5Q96JK2 942 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 ZNF396Q96N95 335 aaPredicted RBP6.33□□□□□ -1.4
CCNT1-204ENST00000551989 FMNL2Q96PY5 1086 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 NEK1Q96PY6 1258 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 HAUS7Q99871 368 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 AGXT2Q9BYV1 514 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 GDPD2Q9HCC8 539 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 TPCN1Q9ULQ1 816 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 DOCK2Q92608 1830 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 ZNF609O15014 1411 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 TNS3Q68CZ2 1445 aa6.33□□□□□ -1.4
CCNT1-204ENST00000551989 A0A0D9SFI3 127 aa6.32□□□□□ -1.4
CCNT1-204ENST00000551989 PFKFB2O60825 505 aa6.32□□□□□ -1.4
CCNT1-204ENST00000551989 TAF5LO75529 589 aa6.32□□□□□ -1.4
CCNT1-204ENST00000551989 CIAO1O76071 339 aa6.32□□□□□ -1.4
CCNT1-204ENST00000551989 ZFYP08048 801 aaPredicted RBP6.32□□□□□ -1.4
CCNT1-204ENST00000551989 ST3GAL1Q11201 340 aa6.32□□□□□ -1.4
CCNT1-204ENST00000551989 TOB2Q14106 344 aaPredicted RBP6.32□□□□□ -1.4
CCNT1-204ENST00000551989 PDIA6Q15084 440 aa6.32□□□□□ -1.4
CCNT1-204ENST00000551989 CWF19L2Q2TBE0 894 aaKnown RBP6.32□□□□□ -1.4
CCNT1-204ENST00000551989 TNNI3KQ59H18 835 aa6.32□□□□□ -1.4
CCNT1-204ENST00000551989 NUTM2GQ5VZR2 741 aa6.32□□□□□ -1.4
CCNT1-204ENST00000551989 PDCL2Q8N4E4 241 aa6.32□□□□□ -1.4
CCNT1-204ENST00000551989 KBTBD3Q8NAB2 608 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms