RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 KIF15Q9NS87 1388 aa9.92□□□□□ -0.82
DEPDC4-210ENST00000551642 DKK1O94907 266 aa9.92□□□□□ -0.82
DEPDC4-210ENST00000551642 GSK3AP49840 483 aa9.92□□□□□ -0.82
DEPDC4-210ENST00000551642 ZCCHC2Q9C0B9 1178 aaKnown RBP9.92□□□□□ -0.82
DEPDC4-210ENST00000551642 KANK1Q14678 1352 aa9.91□□□□□ -0.82
DEPDC4-210ENST00000551642 NPHP3Q7Z494 1330 aa9.91□□□□□ -0.82
DEPDC4-210ENST00000551642 A0A1W2PNR3 127 aa9.91□□□□□ -0.82
DEPDC4-210ENST00000551642 NOS2P35228 1153 aa9.91□□□□□ -0.82
DEPDC4-210ENST00000551642 SLC9A9Q8IVB4 645 aa9.91□□□□□ -0.82
DEPDC4-210ENST00000551642 TNS4Q8IZW8 715 aa9.91□□□□□ -0.82
DEPDC4-210ENST00000551642 ZDHHC1Q8WTX9 485 aa9.91□□□□□ -0.82
DEPDC4-210ENST00000551642 ZIC5Q96T25 663 aa9.91□□□□□ -0.82
DEPDC4-210ENST00000551642 PPP1R12CQ9BZL4 782 aa9.91□□□□□ -0.82
DEPDC4-210ENST00000551642 GPC6Q9Y625 555 aaPredicted RBP9.91□□□□□ -0.82
DEPDC4-210ENST00000551642 FOXO3O43524 673 aa9.9□□□□□ -0.82
DEPDC4-210ENST00000551642 ZBTB7AO95365 584 aa9.9□□□□□ -0.82
DEPDC4-210ENST00000551642 FGFR3P22607 806 aa9.9□□□□□ -0.82
DEPDC4-210ENST00000551642 L3MBTL2Q969R5 705 aa9.9□□□□□ -0.82
DEPDC4-210ENST00000551642 KLRG1Q96E93 195 aa9.9□□□□□ -0.82
DEPDC4-210ENST00000551642 SCARF2Q96GP6 870 aaPredicted RBP9.9□□□□□ -0.82
DEPDC4-210ENST00000551642 ABHD17AQ96GS6 310 aa9.9□□□□□ -0.82
DEPDC4-210ENST00000551642 OXCT2Q9BYC2 517 aaPredicted RBP9.9□□□□□ -0.82
DEPDC4-210ENST00000551642 RGPD3A6NKT7 1758 aaPredicted RBP9.9□□□□□ -0.82
DEPDC4-210ENST00000551642 RGPD4Q7Z3J3 1758 aa9.9□□□□□ -0.82
DEPDC4-210ENST00000551642 IQGAP3Q86VI3 1631 aa9.89□□□□□ -0.83
DEPDC4-210ENST00000551642 SPATA31A3Q5VYP0 1347 aa9.89□□□□□ -0.83
DEPDC4-210ENST00000551642 FAM83GA6ND36 823 aa9.89□□□□□ -0.83
DEPDC4-210ENST00000551642 EML1O00423 815 aa9.89□□□□□ -0.83
DEPDC4-210ENST00000551642 OIP5O43482 229 aa9.89□□□□□ -0.83
DEPDC4-210ENST00000551642 MARSP56192 900 aaKnown RBP9.89□□□□□ -0.83
DEPDC4-210ENST00000551642 ARSJQ5FYB0 599 aaPredicted RBP9.89□□□□□ -0.83
DEPDC4-210ENST00000551642 SAMD5Q5TGI4 173 aa9.89□□□□□ -0.83
DEPDC4-210ENST00000551642 DNAJC5GQ8N7S2 189 aa9.89□□□□□ -0.83
DEPDC4-210ENST00000551642 GDF2Q9UK05 429 aaPredicted RBP9.89□□□□□ -0.83
DEPDC4-210ENST00000551642 SBF2Q86WG5 1849 aa9.89□□□□□ -0.83
DEPDC4-210ENST00000551642 RGPD8O14715 1765 aaPredicted RBP9.88□□□□□ -0.83
DEPDC4-210ENST00000551642 NEXMIFQ5QGS0 1516 aa9.88□□□□□ -0.83
DEPDC4-210ENST00000551642 E9PCH4 1651 aa9.88□□□□□ -0.83
DEPDC4-210ENST00000551642 ATXN7O15265 892 aaPredicted RBP9.88□□□□□ -0.83
DEPDC4-210ENST00000551642 HIRAP54198 1017 aaPredicted RBP9.88□□□□□ -0.83
DEPDC4-210ENST00000551642 C7orf43Q8WVR3 580 aa9.88□□□□□ -0.83
DEPDC4-210ENST00000551642 RRP7BPQ9NSQ0 103 aa9.88□□□□□ -0.83
DEPDC4-210ENST00000551642 ROBO2Q9HCK4 1378 aa9.88□□□□□ -0.83
DEPDC4-210ENST00000551642 SERTM1A2A2V5 107 aa9.87□□□□□ -0.83
DEPDC4-210ENST00000551642 C2CD2LO14523 706 aa9.87□□□□□ -0.83
DEPDC4-210ENST00000551642 FAM157BP0CG42 384 aa9.87□□□□□ -0.83
DEPDC4-210ENST00000551642 RASA1P20936 1047 aa9.87□□□□□ -0.83
DEPDC4-210ENST00000551642 TXLNAP40222 546 aa9.87□□□□□ -0.83
DEPDC4-210ENST00000551642 PSMA6P60900 246 aaKnown RBP9.87□□□□□ -0.83
DEPDC4-210ENST00000551642 RBM19Q9Y4C8 960 aaKnown RBP9.87□□□□□ -0.83
DEPDC4-210ENST00000551642 PARP3Q9Y6F1 533 aa9.87□□□□□ -0.83
DEPDC4-210ENST00000551642 BMP4P12644 408 aa9.86□□□□□ -0.83
DEPDC4-210ENST00000551642 CTBSQ01459 385 aa9.86□□□□□ -0.83
DEPDC4-210ENST00000551642 RASSF7Q02833 373 aa9.86□□□□□ -0.83
DEPDC4-210ENST00000551642 TNP2Q05952 138 aa9.86□□□□□ -0.83
DEPDC4-210ENST00000551642 KANK4Q5T7N3 995 aaPredicted RBP9.86□□□□□ -0.83
DEPDC4-210ENST00000551642 CDC42BPGQ6DT37 1551 aa9.86□□□□□ -0.83
DEPDC4-210ENST00000551642 KANK3Q6NY19 840 aa9.86□□□□□ -0.83
DEPDC4-210ENST00000551642 FAM196AQ6ZSG2 479 aa9.86□□□□□ -0.83
DEPDC4-210ENST00000551642 GOLGA6L1Q8N7Z2 621 aa9.86□□□□□ -0.83
DEPDC4-210ENST00000551642 GAS2L2Q8NHY3 880 aa9.86□□□□□ -0.83
DEPDC4-210ENST00000551642 COL14A1Q05707 1796 aaKnown RBP9.86□□□□□ -0.83
DEPDC4-210ENST00000551642 SPATA31A5Q5VU36 1347 aa9.85□□□□□ -0.83
DEPDC4-210ENST00000551642 SPATA31A7Q8IWB4 1347 aa9.85□□□□□ -0.83
DEPDC4-210ENST00000551642 MAPTP10636 758 aaKnown RBP9.85□□□□□ -0.83
DEPDC4-210ENST00000551642 SEC13P55735 322 aa9.85□□□□□ -0.83
DEPDC4-210ENST00000551642 LAMC2Q13753 1193 aa9.85□□□□□ -0.83
DEPDC4-210ENST00000551642 C1orf53Q5VUE5 145 aa9.85□□□□□ -0.83
DEPDC4-210ENST00000551642 STAG2Q8N3U4 1231 aa9.85□□□□□ -0.83
DEPDC4-210ENST00000551642 ZNF594Q96JF6 807 aaPredicted RBP9.85□□□□□ -0.83
DEPDC4-210ENST00000551642 TSPAN10Q9H1Z9 355 aaPredicted RBP9.85□□□□□ -0.83
DEPDC4-210ENST00000551642 ATP10DQ9P241 1426 aa9.84□□□□□ -0.83
DEPDC4-210ENST00000551642 FAM196BA6NMK8 535 aa9.84□□□□□ -0.83
DEPDC4-210ENST00000551642 SFI1A8K8P3 1242 aa9.84□□□□□ -0.83
DEPDC4-210ENST00000551642 PTK7Q13308 1070 aa9.84□□□□□ -0.83
DEPDC4-210ENST00000551642 LARP1Q6PKG0 1096 aaKnown RBP9.84□□□□□ -0.83
DEPDC4-210ENST00000551642 BICDL1Q6ZP65 573 aa9.84□□□□□ -0.83
DEPDC4-210ENST00000551642 NEDD1Q8NHV4 660 aa9.84□□□□□ -0.83
DEPDC4-210ENST00000551642 AVENQ9NQS1 362 aaPredicted RBP9.84□□□□□ -0.83
DEPDC4-210ENST00000551642 ZNF232Q9UNY5 417 aa9.84□□□□□ -0.83
DEPDC4-210ENST00000551642 CHMP3Q9Y3E7 222 aa9.84□□□□□ -0.83
DEPDC4-210ENST00000551642 GJA3Q9Y6H8 435 aa9.84□□□□□ -0.83
DEPDC4-210ENST00000551642 ABCC5O15440 1437 aa9.83□□□□□ -0.84
DEPDC4-210ENST00000551642 WDR90Q96KV7 1748 aa9.83□□□□□ -0.84
DEPDC4-210ENST00000551642 EFSO43281 561 aa9.83□□□□□ -0.84
DEPDC4-210ENST00000551642 ARAFP10398 606 aa9.83□□□□□ -0.84
DEPDC4-210ENST00000551642 TBCELQ5QJ74 424 aa9.83□□□□□ -0.84
DEPDC4-210ENST00000551642 SLCO4C1Q6ZQN7 724 aa9.83□□□□□ -0.84
DEPDC4-210ENST00000551642 TMEM151AQ8N4L1 468 aa9.83□□□□□ -0.84
DEPDC4-210ENST00000551642 TSEN2Q8NCE0 465 aaKnown RBP9.83□□□□□ -0.84
DEPDC4-210ENST00000551642 VRTNQ9H8Y1 702 aa9.83□□□□□ -0.84
DEPDC4-210ENST00000551642 BTG4Q9NY30 223 aa9.83□□□□□ -0.84
DEPDC4-210ENST00000551642 MAP3K5Q99683 1374 aa9.83□□□□□ -0.84
DEPDC4-210ENST00000551642 KIF1AQ12756 1690 aa9.83□□□□□ -0.84
DEPDC4-210ENST00000551642 CRYBG1Q9Y4K1 1723 aa9.82□□□□□ -0.84
DEPDC4-210ENST00000551642 GPR162Q16538 588 aa9.82□□□□□ -0.84
DEPDC4-210ENST00000551642 BEND7Q8N7W2 519 aaPredicted RBP9.82□□□□□ -0.84
DEPDC4-210ENST00000551642 GALNT6Q8NCL4 622 aa9.82□□□□□ -0.84
DEPDC4-210ENST00000551642 HCN2Q9UL51 889 aa9.82□□□□□ -0.84
DEPDC4-210ENST00000551642 PEAK1Q9H792 1746 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms