RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 HDAC5Q9UQL6 1122 aa23.85■■□□□ 1.41
DDX54-208ENST00000551344 TMEM88BA6NKF7 163 aa23.84■■□□□ 1.41
DDX54-208ENST00000551344 TRPM4Q8TD43 1214 aa23.84■■□□□ 1.41
DDX54-208ENST00000551344 SCN9AQ15858 1988 aa23.83■■□□□ 1.41
DDX54-208ENST00000551344 STRIP1Q5VSL9 837 aa23.83■■□□□ 1.41
DDX54-208ENST00000551344 SAMD7Q7Z3H4 446 aa23.83■■□□□ 1.41
DDX54-208ENST00000551344 GMLQ99445 158 aa23.83■■□□□ 1.41
DDX54-208ENST00000551344 RIPOR2Q9Y4F9 1068 aa23.83■■□□□ 1.41
DDX54-208ENST00000551344 ZNF609O15014 1411 aa23.83■■□□□ 1.4
DDX54-208ENST00000551344 PLIN1O60240 522 aa23.82■■□□□ 1.4
DDX54-208ENST00000551344 BCAR3O75815 825 aa23.82■■□□□ 1.4
DDX54-208ENST00000551344 UBTFL1P0CB47 393 aaPredicted RBP23.82■■□□□ 1.4
DDX54-208ENST00000551344 KLRK1P26718 216 aa23.82■■□□□ 1.4
DDX54-208ENST00000551344 INTS3Q68E01 1043 aaKnown RBP23.82■■□□□ 1.4
DDX54-208ENST00000551344 SNAP23O00161 211 aa23.81■■□□□ 1.4
DDX54-208ENST00000551344 ZNF280AP59817 542 aaPredicted RBP23.81■■□□□ 1.4
DDX54-208ENST00000551344 PUS3Q9BZE2 481 aaKnown RBP23.81■■□□□ 1.4
DDX54-208ENST00000551344 CD209Q9NNX6 404 aa23.81■■□□□ 1.4
DDX54-208ENST00000551344 MROH5Q6ZUA9 1318 aa23.81■■□□□ 1.4
DDX54-208ENST00000551344 IRS2Q9Y4H2 1338 aa23.81■■□□□ 1.4
DDX54-208ENST00000551344 USP17L8P0C7I0 530 aa23.8■■□□□ 1.4
DDX54-208ENST00000551344 UBE4AQ14139 1066 aa23.8■■□□□ 1.4
DDX54-208ENST00000551344 TBC1D10BQ4KMP7 808 aaPredicted RBP23.8■■□□□ 1.4
DDX54-208ENST00000551344 DACT2Q5SW24 774 aa23.8■■□□□ 1.4
DDX54-208ENST00000551344 TTLL5Q6EMB2 1281 aa23.8■■□□□ 1.4
DDX54-208ENST00000551344 ATF7IPQ6VMQ6 1270 aa23.8■■□□□ 1.4
DDX54-208ENST00000551344 CDC37L1Q7L3B6 337 aa23.8■■□□□ 1.4
DDX54-208ENST00000551344 JMYQ8N9B5 988 aa23.8■■□□□ 1.4
DDX54-208ENST00000551344 MYO3BQ8WXR4 1341 aa23.8■■□□□ 1.4
DDX54-208ENST00000551344 MMP14P50281 582 aa23.79■■□□□ 1.4
DDX54-208ENST00000551344 RBM26Q5T8P6 1007 aaKnown RBP23.79■■□□□ 1.4
DDX54-208ENST00000551344 FRAT1Q92837 279 aaPredicted RBP23.79■■□□□ 1.4
DDX54-208ENST00000551344 TRIM27P14373 513 aa23.78■■□□□ 1.4
DDX54-208ENST00000551344 KIF4BQ2VIQ3 1234 aa23.78■■□□□ 1.4
DDX54-208ENST00000551344 ZNF804AQ7Z570 1209 aa23.78■■□□□ 1.4
DDX54-208ENST00000551344 EGFRP00533 1210 aa23.77■■□□□ 1.4
DDX54-208ENST00000551344 IL1R1P14778 569 aa23.77■■□□□ 1.4
DDX54-208ENST00000551344 LRRC24Q50LG9 513 aa23.77■■□□□ 1.4
DDX54-208ENST00000551344 TRAF5O00463 557 aa23.76■■□□□ 1.39
DDX54-208ENST00000551344 GNAI3P08754 354 aa23.76■■□□□ 1.39
DDX54-208ENST00000551344 GTF2IP78347 998 aa23.76■■□□□ 1.39
DDX54-208ENST00000551344 OGFOD1Q8N543 542 aa23.76■■□□□ 1.39
DDX54-208ENST00000551344 FBXW7Q969H0 707 aa23.76■■□□□ 1.39
DDX54-208ENST00000551344 GLIS2Q9BZE0 524 aaPredicted RBP23.76■■□□□ 1.39
DDX54-208ENST00000551344 PSME4Q14997 1843 aa23.75■■□□□ 1.39
DDX54-208ENST00000551344 RFX5P48382 616 aaPredicted RBP23.75■■□□□ 1.39
DDX54-208ENST00000551344 FMR1Q06787 632 aaKnown RBP eCLIP23.75■■□□□ 1.392e-7■■■■■ 33.1
DDX54-208ENST00000551344 METTL24Q5JXM2 366 aa23.75■■□□□ 1.39
DDX54-208ENST00000551344 ZKSCAN2Q63HK3 967 aa23.75■■□□□ 1.39
DDX54-208ENST00000551344 DCPSQ96C86 337 aaKnown RBP23.75■■□□□ 1.39
DDX54-208ENST00000551344 MEIS3Q99687 375 aa23.75■■□□□ 1.39
DDX54-208ENST00000551344 MYOZ2Q9NPC6 264 aa23.75■■□□□ 1.39
DDX54-208ENST00000551344 PDE8BO95263 885 aa23.74■■□□□ 1.39
DDX54-208ENST00000551344 PTPN12Q05209 780 aaKnown RBP23.74■■□□□ 1.39
DDX54-208ENST00000551344 CST9Q5W186 159 aa23.74■■□□□ 1.39
DDX54-208ENST00000551344 KLHDC4Q8TBB5 520 aa23.74■■□□□ 1.39
DDX54-208ENST00000551344 MXD3Q9BW11 206 aa23.74■■□□□ 1.39
DDX54-208ENST00000551344 MKRN1Q9UHC7 482 aaKnown RBP23.74■■□□□ 1.39
DDX54-208ENST00000551344 FBXO3Q9UK99 471 aa23.74■■□□□ 1.39
DDX54-208ENST00000551344 LRRFIP2Q9Y608 721 aaKnown RBP23.74■■□□□ 1.39
DDX54-208ENST00000551344 EYA2O00167 538 aa23.73■■□□□ 1.39
DDX54-208ENST00000551344 USP48Q86UV5 1035 aa23.73■■□□□ 1.39
DDX54-208ENST00000551344 CNTNAP1P78357 1384 aa23.73■■□□□ 1.39
DDX54-208ENST00000551344 RASSF10A6NK89 507 aa23.72■■□□□ 1.39
DDX54-208ENST00000551344 SASH1O94885 1247 aa23.72■■□□□ 1.39
DDX54-208ENST00000551344 HIBADHP31937 336 aaKnown RBP23.72■■□□□ 1.39
DDX54-208ENST00000551344 SCARF1Q14162 830 aa23.72■■□□□ 1.39
DDX54-208ENST00000551344 DEFB115Q30KQ5 88 aa23.72■■□□□ 1.39
DDX54-208ENST00000551344 KRT26Q7Z3Y9 468 aa23.72■■□□□ 1.39
DDX54-208ENST00000551344 VGLL2Q8N8G2 317 aa23.72■■□□□ 1.39
DDX54-208ENST00000551344 FAM84BQ96KN1 310 aaPredicted RBP23.72■■□□□ 1.39
DDX54-208ENST00000551344 FKBP1AP62942 108 aaKnown RBP23.71■■□□□ 1.39
DDX54-208ENST00000551344 TDRD7Q8NHU6 1098 aaKnown RBP23.71■■□□□ 1.39
DDX54-208ENST00000551344 CLUAP1Q96AJ1 413 aa23.71■■□□□ 1.39
DDX54-208ENST00000551344 HDAC9Q9UKV0 1011 aa23.71■■□□□ 1.39
DDX54-208ENST00000551344 ABT1Q9ULW3 272 aaKnown RBP23.71■■□□□ 1.39
DDX54-208ENST00000551344 CELF2O95319 508 aaKnown RBP23.7■■□□□ 1.38
DDX54-208ENST00000551344 TNNQ9UQP3 1299 aa23.7■■□□□ 1.38
DDX54-208ENST00000551344 A0A1B0GUL6 1792 aa23.7■■□□□ 1.38
DDX54-208ENST00000551344 CIAO1O76071 339 aa23.69■■□□□ 1.38
DDX54-208ENST00000551344 GYG1P46976 350 aa23.69■■□□□ 1.38
DDX54-208ENST00000551344 FBXO33Q7Z6M2 555 aa23.69■■□□□ 1.38
DDX54-208ENST00000551344 KIAA0825Q8IV33 1275 aa23.69■■□□□ 1.38
DDX54-208ENST00000551344 SULF1Q8IWU6 871 aa23.69■■□□□ 1.38
DDX54-208ENST00000551344 GGA3Q9NZ52 723 aa23.69■■□□□ 1.38
DDX54-208ENST00000551344 FAM205AQ6ZU69 1335 aa23.68■■□□□ 1.38
DDX54-208ENST00000551344 CAVIN4Q5BKX8 364 aa23.68■■□□□ 1.38
DDX54-208ENST00000551344 ATG9AQ7Z3C6 839 aa23.68■■□□□ 1.38
DDX54-208ENST00000551344 VPS37DQ86XT2 251 aa23.68■■□□□ 1.38
DDX54-208ENST00000551344 TLL2Q9Y6L7 1015 aa23.68■■□□□ 1.38
DDX54-208ENST00000551344 PITPNM2Q9BZ72 1349 aa23.67■■□□□ 1.38
DDX54-208ENST00000551344 IFIT1P09914 478 aaKnown RBP23.67■■□□□ 1.38
DDX54-208ENST00000551344 VEGFBP49765 207 aa23.67■■□□□ 1.38
DDX54-208ENST00000551344 MTX1Q13505 466 aa23.67■■□□□ 1.38
DDX54-208ENST00000551344 PUM3Q15397 648 aaKnown RBP23.67■■□□□ 1.38
DDX54-208ENST00000551344 ANGEL2Q5VTE6 544 aaKnown RBP23.67■■□□□ 1.38
DDX54-208ENST00000551344 TMEM57Q8N5G2 664 aa23.67■■□□□ 1.38
DDX54-208ENST00000551344 COPRSQ9NQ92 184 aa23.67■■□□□ 1.38
DDX54-208ENST00000551344 TRPM7Q96QT4 1865 aa23.66■■□□□ 1.38
DDX54-208ENST00000551344 ASTN2O75129 1339 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms