RNA–Protein interactions for RNA: ENST00000551088.1

TMTC3-204, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 3

Gene TMTC3, Length 646 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-204ENST00000551088 IGSF1Q8N6C5 1336 aa12.55□□□□□ -0.4
TMTC3-204ENST00000551088 BRCA1P38398 1863 aaKnown RBP12.55□□□□□ -0.4
TMTC3-204ENST00000551088 MAGEB6P1A0A0J9YX57 407 aa12.54□□□□□ -0.4
TMTC3-204ENST00000551088 GRM5P41594 1212 aa12.54□□□□□ -0.4
TMTC3-204ENST00000551088 ITPKCQ96DU7 683 aa12.54□□□□□ -0.4
TMTC3-204ENST00000551088 C1QTNF2Q9BXJ5 285 aa12.54□□□□□ -0.4
TMTC3-204ENST00000551088 KIAA1551Q9HCM1 1747 aa12.54□□□□□ -0.4
TMTC3-204ENST00000551088 ATP10DQ9P241 1426 aa12.54□□□□□ -0.4
TMTC3-204ENST00000551088 HSP90AB1P08238 724 aaKnown RBP12.53□□□□□ -0.4
TMTC3-204ENST00000551088 FSHRP23945 695 aa12.53□□□□□ -0.4
TMTC3-204ENST00000551088 PLEKHO1Q53GL0 409 aaPredicted RBP12.53□□□□□ -0.4
TMTC3-204ENST00000551088 SH3BP5LQ7L8J4 393 aa12.53□□□□□ -0.4
TMTC3-204ENST00000551088 NPAS3Q8IXF0 933 aa12.53□□□□□ -0.4
TMTC3-204ENST00000551088 CEP350Q5VT06 3117 aa12.53□□□□□ -0.4
TMTC3-204ENST00000551088 CICQ96RK0 1608 aaPredicted RBP12.52□□□□□ -0.4
TMTC3-204ENST00000551088 ERVV-2B6SEH9 535 aa12.52□□□□□ -0.41
TMTC3-204ENST00000551088 VEGFBP49765 207 aa12.52□□□□□ -0.41
TMTC3-204ENST00000551088 TRAPPC3LQ5T215 181 aa12.52□□□□□ -0.41
TMTC3-204ENST00000551088 ZNF530Q6P9A1 599 aaPredicted RBP12.52□□□□□ -0.41
TMTC3-204ENST00000551088 MORC1Q86VD1 984 aa12.52□□□□□ -0.41
TMTC3-204ENST00000551088 ZNF526Q8TF50 670 aaPredicted RBP12.52□□□□□ -0.41
TMTC3-204ENST00000551088 STK17AQ9UEE5 414 aa12.52□□□□□ -0.41
TMTC3-204ENST00000551088 RTCBQ9Y3I0 505 aaKnown RBP12.52□□□□□ -0.41
TMTC3-204ENST00000551088 ARFGEF1Q9Y6D6 1849 aa12.52□□□□□ -0.41
TMTC3-204ENST00000551088 CCDC88AQ3V6T2 1871 aa12.51□□□□□ -0.41
TMTC3-204ENST00000551088 MMP10P09238 476 aa12.51□□□□□ -0.41
TMTC3-204ENST00000551088 CABP4P57796 275 aa12.51□□□□□ -0.41
TMTC3-204ENST00000551088 CTDSPL2Q05D32 466 aa12.51□□□□□ -0.41
TMTC3-204ENST00000551088 VASH1Q7L8A9 365 aaPredicted RBP12.51□□□□□ -0.41
TMTC3-204ENST00000551088 GPKOWQ92917 476 aaPredicted RBP eCLIP12.51□□□□□ -0.41
TMTC3-204ENST00000551088 IRF7Q92985 503 aa12.51□□□□□ -0.41
TMTC3-204ENST00000551088 DCAF5Q96JK2 942 aa12.51□□□□□ -0.41
TMTC3-204ENST00000551088 PODXL2Q9NZ53 605 aa12.51□□□□□ -0.41
TMTC3-204ENST00000551088 PLEKHG2Q9H7P9 1386 aa12.51□□□□□ -0.41
TMTC3-204ENST00000551088 TJP1Q07157 1748 aa12.51□□□□□ -0.41
TMTC3-204ENST00000551088 MTHFSP49914 203 aa12.5□□□□□ -0.41
TMTC3-204ENST00000551088 AMOTQ4VCS5 1084 aa12.5□□□□□ -0.41
TMTC3-204ENST00000551088 C1orf141Q5JVX7 400 aa12.5□□□□□ -0.41
TMTC3-204ENST00000551088 TRMT44Q8IYL2 757 aaKnown RBP12.5□□□□□ -0.41
TMTC3-204ENST00000551088 CCDC82Q8N4S0 544 aa12.5□□□□□ -0.41
TMTC3-204ENST00000551088 CCER1Q8TC90 406 aaPredicted RBP12.5□□□□□ -0.41
TMTC3-204ENST00000551088 MAP4K5Q9Y4K4 846 aa12.5□□□□□ -0.41
TMTC3-204ENST00000551088 KDM6AO15550 1401 aaPredicted RBP12.49□□□□□ -0.41
TMTC3-204ENST00000551088 KDRP35968 1356 aa12.49□□□□□ -0.41
TMTC3-204ENST00000551088 H3BM21 787 aa12.49□□□□□ -0.41
TMTC3-204ENST00000551088 RAD21O60216 631 aa12.49□□□□□ -0.41
TMTC3-204ENST00000551088 RFC4P35249 363 aa12.49□□□□□ -0.41
TMTC3-204ENST00000551088 C6orf118Q5T5N4 469 aa12.49□□□□□ -0.41
TMTC3-204ENST00000551088 POM121Q96HA1 1249 aa12.49□□□□□ -0.41
TMTC3-204ENST00000551088 KNSTRNQ9Y448 316 aa12.49□□□□□ -0.41
TMTC3-204ENST00000551088 SBF1O95248 1867 aa12.48□□□□□ -0.41
TMTC3-204ENST00000551088 AFDNP55196 1824 aaKnown RBP12.48□□□□□ -0.41
TMTC3-204ENST00000551088 PTCD1O75127 700 aaKnown RBP12.48□□□□□ -0.41
TMTC3-204ENST00000551088 UPP2O95045 317 aa12.48□□□□□ -0.41
TMTC3-204ENST00000551088 SULT6B1Q6IMI4 303 aa12.48□□□□□ -0.41
TMTC3-204ENST00000551088 AEBP1Q8IUX7 1158 aa12.48□□□□□ -0.41
TMTC3-204ENST00000551088 NLGN1Q8N2Q7 840 aa12.48□□□□□ -0.41
TMTC3-204ENST00000551088 SLC4A9Q96Q91 983 aa12.48□□□□□ -0.41
TMTC3-204ENST00000551088 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.48□□□□□ -0.41
TMTC3-204ENST00000551088 CNTNAP4Q9C0A0 1308 aa12.47□□□□□ -0.41
TMTC3-204ENST00000551088 SOBPA7XYQ1 873 aa12.47□□□□□ -0.41
TMTC3-204ENST00000551088 CCDC87Q9NVE4 849 aa12.47□□□□□ -0.41
TMTC3-204ENST00000551088 PARP3Q9Y6F1 533 aa12.47□□□□□ -0.41
TMTC3-204ENST00000551088 ADCY9O60503 1353 aa12.46□□□□□ -0.41
TMTC3-204ENST00000551088 RPS6KA4O75676 772 aa12.46□□□□□ -0.41
TMTC3-204ENST00000551088 NFATC2IPQ8NCF5 419 aa12.46□□□□□ -0.41
TMTC3-204ENST00000551088 LRRN4Q8WUT4 740 aa12.46□□□□□ -0.41
TMTC3-204ENST00000551088 BCS1LQ9Y276 419 aa12.46□□□□□ -0.41
TMTC3-204ENST00000551088 PXDNLA1KZ92 1463 aa12.46□□□□□ -0.42
TMTC3-204ENST00000551088 A0A0G2JLW4 131 aa12.45□□□□□ -0.42
TMTC3-204ENST00000551088 BMP2P12643 396 aa12.45□□□□□ -0.42
TMTC3-204ENST00000551088 GYS1P13807 737 aa12.45□□□□□ -0.42
TMTC3-204ENST00000551088 GMPRP36959 345 aa12.45□□□□□ -0.42
TMTC3-204ENST00000551088 TGFB2P61812 414 aa12.45□□□□□ -0.42
TMTC3-204ENST00000551088 ERFEQ4G0M1 354 aa12.45□□□□□ -0.42
TMTC3-204ENST00000551088 LINC00528Q8N1L1 170 aa12.45□□□□□ -0.42
TMTC3-204ENST00000551088 MEIOBQ8N635 442 aa12.45□□□□□ -0.42
TMTC3-204ENST00000551088 MAN1A2O60476 641 aa12.44□□□□□ -0.42
TMTC3-204ENST00000551088 RFC5P40937 340 aa12.44□□□□□ -0.42
TMTC3-204ENST00000551088 CRKLP46109 303 aaKnown RBP12.44□□□□□ -0.42
TMTC3-204ENST00000551088 ARHGAP27Q6ZUM4 889 aa12.44□□□□□ -0.42
TMTC3-204ENST00000551088 CCDC116Q8IYX3 515 aa12.44□□□□□ -0.42
TMTC3-204ENST00000551088 ARHGAP9Q9BRR9 750 aa12.44□□□□□ -0.42
TMTC3-204ENST00000551088 FKBPLQ9UIM3 349 aa12.44□□□□□ -0.42
TMTC3-204ENST00000551088 C10orf71Q711Q0 1435 aa12.44□□□□□ -0.42
TMTC3-204ENST00000551088 CACNA1SQ13698 1873 aa12.43□□□□□ -0.42
TMTC3-204ENST00000551088 DPEP1P16444 411 aa12.43□□□□□ -0.42
TMTC3-204ENST00000551088 IL13P35225 146 aa12.43□□□□□ -0.42
TMTC3-204ENST00000551088 SRP68Q9UHB9 627 aaKnown RBP12.43□□□□□ -0.42
TMTC3-204ENST00000551088 ADAMTS7Q9UKP4 1686 aa12.42□□□□□ -0.42
TMTC3-204ENST00000551088 AKAP4Q5JQC9 854 aa12.42□□□□□ -0.42
TMTC3-204ENST00000551088 PDXDC2PQ6P474 469 aa12.42□□□□□ -0.42
TMTC3-204ENST00000551088 ERBB4Q15303 1308 aa12.41□□□□□ -0.42
TMTC3-204ENST00000551088 UBR2Q8IWV8 1755 aa12.41□□□□□ -0.42
TMTC3-204ENST00000551088 HMOX1P09601 288 aa12.41□□□□□ -0.42
TMTC3-204ENST00000551088 SLC10A4Q96EP9 437 aa12.41□□□□□ -0.42
TMTC3-204ENST00000551088 SNRKQ9NRH2 765 aa12.41□□□□□ -0.42
TMTC3-204ENST00000551088 DLEC1Q9Y238 1755 aa12.41□□□□□ -0.42
TMTC3-204ENST00000551088 HSPA6P17066 643 aa12.4□□□□□ -0.42
TMTC3-204ENST00000551088 CNGB1Q14028 1251 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms