RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 HELBQ8NG08 1087 aaPredicted RBP19.27■□□□□ 0.68
PRPF40B-211ENST00000551063 PUS3Q9BZE2 481 aaKnown RBP19.27■□□□□ 0.68
PRPF40B-211ENST00000551063 ADARB2Q9NS39 739 aaKnown RBP19.27■□□□□ 0.68
PRPF40B-211ENST00000551063 FBXO3Q9UK99 471 aa19.27■□□□□ 0.68
PRPF40B-211ENST00000551063 VIL1P09327 827 aaKnown RBP19.26■□□□□ 0.67
PRPF40B-211ENST00000551063 KLRK1P26718 216 aa19.26■□□□□ 0.67
PRPF40B-211ENST00000551063 MTX1Q13505 466 aa19.26■□□□□ 0.67
PRPF40B-211ENST00000551063 UBE4AQ14139 1066 aa19.26■□□□□ 0.67
PRPF40B-211ENST00000551063 TXNRD3Q86VQ6 643 aa19.26■□□□□ 0.67
PRPF40B-211ENST00000551063 RCAN3Q9UKA8 241 aa19.26■□□□□ 0.67
PRPF40B-211ENST00000551063 PASKQ96RG2 1323 aa19.25■□□□□ 0.67
PRPF40B-211ENST00000551063 EYA2O00167 538 aa19.25■□□□□ 0.67
PRPF40B-211ENST00000551063 GNAI2P04899 355 aa19.25■□□□□ 0.67
PRPF40B-211ENST00000551063 MS4A1P11836 297 aa19.25■□□□□ 0.67
PRPF40B-211ENST00000551063 PTPN12Q05209 780 aaKnown RBP19.25■□□□□ 0.67
PRPF40B-211ENST00000551063 LRRC24Q50LG9 513 aa19.25■□□□□ 0.67
PRPF40B-211ENST00000551063 KLHDC4Q8TBB5 520 aa19.25■□□□□ 0.67
PRPF40B-211ENST00000551063 KCNQ5Q9NR82 932 aa19.25■□□□□ 0.67
PRPF40B-211ENST00000551063 USP17L3A6NCW0 530 aa19.24■□□□□ 0.67
PRPF40B-211ENST00000551063 USP17L4A6NCW7 530 aa19.24■□□□□ 0.67
PRPF40B-211ENST00000551063 SNAP23O00161 211 aa19.24■□□□□ 0.67
PRPF40B-211ENST00000551063 ITGBL1O95965 494 aaPredicted RBP19.24■□□□□ 0.67
PRPF40B-211ENST00000551063 METTL24Q5JXM2 366 aa19.24■□□□□ 0.67
PRPF40B-211ENST00000551063 RSBN1LQ6PCB5 846 aaPredicted RBP19.24■□□□□ 0.67
PRPF40B-211ENST00000551063 USP17L1Q7RTZ2 530 aa19.24■□□□□ 0.67
PRPF40B-211ENST00000551063 AGBL3Q8NEM8 1001 aa19.24■□□□□ 0.67
PRPF40B-211ENST00000551063 ZBTB12Q9Y330 459 aaPredicted RBP19.24■□□□□ 0.67
PRPF40B-211ENST00000551063 ADAMTSL1Q8N6G6 1762 aa19.24■□□□□ 0.67
PRPF40B-211ENST00000551063 TMEM88BA6NKF7 163 aa19.23■□□□□ 0.67
PRPF40B-211ENST00000551063 H7C1D1 291 aa19.23■□□□□ 0.67
PRPF40B-211ENST00000551063 PLIN1O60240 522 aa19.23■□□□□ 0.67
PRPF40B-211ENST00000551063 HSPA1AP0DMV8 641 aaKnown RBP19.23■□□□□ 0.67
PRPF40B-211ENST00000551063 HSPA1BP0DMV9 641 aaKnown RBP19.23■□□□□ 0.67
PRPF40B-211ENST00000551063 RLBP1P12271 317 aa19.23■□□□□ 0.67
PRPF40B-211ENST00000551063 STRIP1Q5VSL9 837 aa19.23■□□□□ 0.67
PRPF40B-211ENST00000551063 ZNF804AQ7Z570 1209 aa19.23■□□□□ 0.67
PRPF40B-211ENST00000551063 ITPRIPQ8IWB1 547 aa19.23■□□□□ 0.67
PRPF40B-211ENST00000551063 MICALL2Q8IY33 904 aa19.23■□□□□ 0.67
PRPF40B-211ENST00000551063 VGLL2Q8N8G2 317 aa19.23■□□□□ 0.67
PRPF40B-211ENST00000551063 CD209Q9NNX6 404 aa19.23■□□□□ 0.67
PRPF40B-211ENST00000551063 COPRSQ9NQ92 184 aa19.23■□□□□ 0.67
PRPF40B-211ENST00000551063 MKRN1Q9UHC7 482 aaKnown RBP19.23■□□□□ 0.67
PRPF40B-211ENST00000551063 CNOT7Q9UIV1 285 aaKnown RBP19.23■□□□□ 0.67
PRPF40B-211ENST00000551063 A0A1B0GUL6 1792 aa19.22■□□□□ 0.67
PRPF40B-211ENST00000551063 CIAO1O76071 339 aa19.22■□□□□ 0.67
PRPF40B-211ENST00000551063 PDE8BO95263 885 aa19.22■□□□□ 0.67
PRPF40B-211ENST00000551063 COL13A1Q5TAT6 717 aaPredicted RBP19.22■□□□□ 0.67
PRPF40B-211ENST00000551063 CNTROBQ8N137 903 aa19.22■□□□□ 0.67
PRPF40B-211ENST00000551063 SCN9AQ15858 1988 aa19.22■□□□□ 0.67
PRPF40B-211ENST00000551063 MYO3BQ8WXR4 1341 aa19.22■□□□□ 0.67
PRPF40B-211ENST00000551063 DACT2Q5SW24 774 aa19.21■□□□□ 0.67
PRPF40B-211ENST00000551063 SRGAP3O43295 1099 aa19.2■□□□□ 0.66
PRPF40B-211ENST00000551063 IL1R1P14778 569 aa19.2■□□□□ 0.66
PRPF40B-211ENST00000551063 PUM3Q15397 648 aaKnown RBP19.2■□□□□ 0.66
PRPF40B-211ENST00000551063 ATG9AQ7Z3C6 839 aa19.2■□□□□ 0.66
PRPF40B-211ENST00000551063 TRPM4Q8TD43 1214 aa19.2■□□□□ 0.66
PRPF40B-211ENST00000551063 GMLQ99445 158 aa19.2■□□□□ 0.66
PRPF40B-211ENST00000551063 CNTNAP1P78357 1384 aa19.19■□□□□ 0.66
PRPF40B-211ENST00000551063 SHTN1A0MZ66 631 aa19.19■□□□□ 0.66
PRPF40B-211ENST00000551063 ZBTB7BO15156 539 aaPredicted RBP19.19■□□□□ 0.66
PRPF40B-211ENST00000551063 IL15P40933 162 aaPredicted RBP19.19■□□□□ 0.66
PRPF40B-211ENST00000551063 MAP1SQ66K74 1059 aaPredicted RBP19.19■□□□□ 0.66
PRPF40B-211ENST00000551063 PANK1Q8TE04 598 aa19.19■□□□□ 0.66
PRPF40B-211ENST00000551063 ZC3H15Q8WU90 426 aaKnown RBP19.19■□□□□ 0.66
PRPF40B-211ENST00000551063 FGFR2P21802 821 aa19.18■□□□□ 0.66
PRPF40B-211ENST00000551063 ZNF280AP59817 542 aaPredicted RBP19.18■□□□□ 0.66
PRPF40B-211ENST00000551063 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.18■□□□□ 0.66
PRPF40B-211ENST00000551063 SIL1Q9H173 461 aa19.18■□□□□ 0.66
PRPF40B-211ENST00000551063 PA2G4Q9UQ80 394 aaKnown RBP19.18■□□□□ 0.66
PRPF40B-211ENST00000551063 PSME4Q14997 1843 aa19.18■□□□□ 0.66
PRPF40B-211ENST00000551063 IFIT1P09914 478 aaKnown RBP19.17■□□□□ 0.66
PRPF40B-211ENST00000551063 USP17L8P0C7I0 530 aa19.17■□□□□ 0.66
PRPF40B-211ENST00000551063 HIBADHP31937 336 aaKnown RBP19.17■□□□□ 0.66
PRPF40B-211ENST00000551063 MMP14P50281 582 aa19.17■□□□□ 0.66
PRPF40B-211ENST00000551063 HIRAP54198 1017 aaPredicted RBP19.17■□□□□ 0.66
PRPF40B-211ENST00000551063 GTF2IP78347 998 aa19.17■□□□□ 0.66
PRPF40B-211ENST00000551063 TTLL5Q6EMB2 1281 aa19.17■□□□□ 0.66
PRPF40B-211ENST00000551063 TNS4Q8IZW8 715 aa19.17■□□□□ 0.66
PRPF40B-211ENST00000551063 FBXW7Q969H0 707 aa19.17■□□□□ 0.66
PRPF40B-211ENST00000551063 FAM84BQ96KN1 310 aaPredicted RBP19.17■□□□□ 0.66
PRPF40B-211ENST00000551063 PGAP2Q9UHJ9 254 aa19.17■□□□□ 0.66
PRPF40B-211ENST00000551063 GYG1P46976 350 aa19.16■□□□□ 0.66
PRPF40B-211ENST00000551063 KIF4BQ2VIQ3 1234 aa19.16■□□□□ 0.66
PRPF40B-211ENST00000551063 SAMD7Q7Z3H4 446 aa19.16■□□□□ 0.66
PRPF40B-211ENST00000551063 LPIN2Q92539 896 aa19.16■□□□□ 0.66
PRPF40B-211ENST00000551063 YTHDC1Q96MU7 727 aaKnown RBP19.16■□□□□ 0.66
PRPF40B-211ENST00000551063 CEP126Q9P2H0 1117 aa19.16■□□□□ 0.66
PRPF40B-211ENST00000551063 PNMA6EA0A0J9YXQ4 647 aa19.15■□□□□ 0.66
PRPF40B-211ENST00000551063 SLC5A1P13866 664 aa19.15■□□□□ 0.66
PRPF40B-211ENST00000551063 FKBP1AP62942 108 aaKnown RBP19.15■□□□□ 0.66
PRPF40B-211ENST00000551063 MVPQ14764 893 aaKnown RBP19.15■□□□□ 0.66
PRPF40B-211ENST00000551063 TBC1D10BQ4KMP7 808 aaPredicted RBP19.15■□□□□ 0.66
PRPF40B-211ENST00000551063 CAVIN4Q5BKX8 364 aa19.15■□□□□ 0.66
PRPF40B-211ENST00000551063 FBXO33Q7Z6M2 555 aa19.15■□□□□ 0.66
PRPF40B-211ENST00000551063 TDRD7Q8NHU6 1098 aaKnown RBP19.15■□□□□ 0.66
PRPF40B-211ENST00000551063 DDX19BQ9UMR2 479 aa19.15■□□□□ 0.66
PRPF40B-211ENST00000551063 FAM205AQ6ZU69 1335 aa19.15■□□□□ 0.66
PRPF40B-211ENST00000551063 SASH1O94885 1247 aa19.14■□□□□ 0.65
PRPF40B-211ENST00000551063 VEGFBP49765 207 aa19.14■□□□□ 0.65
PRPF40B-211ENST00000551063 POLA2Q14181 598 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms