RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 ZNF428Q96B54 188 aa15.06■□□□□ 0
GPN3-208ENST00000550974 FAM122AQ96E09 287 aa15.06■□□□□ 0
GPN3-208ENST00000550974 VCANP13611 3396 aa15.06■□□□□ 0
GPN3-208ENST00000550974 TESPA1A2RU30 521 aaPredicted RBP15.05■□□□□ -0
GPN3-208ENST00000550974 USP17L3A6NCW0 530 aa15.05■□□□□ -0
GPN3-208ENST00000550974 USP17L4A6NCW7 530 aa15.05■□□□□ -0
GPN3-208ENST00000550974 UFL1O94874 794 aa15.05■□□□□ -0
GPN3-208ENST00000550974 GJB1P08034 283 aa15.05■□□□□ -0
GPN3-208ENST00000550974 BMP8BP34820 402 aa15.05■□□□□ -0
GPN3-208ENST00000550974 KIF22Q14807 665 aa15.05■□□□□ -0
GPN3-208ENST00000550974 TAF1CQ15572 869 aaPredicted RBP15.05■□□□□ -0
GPN3-208ENST00000550974 LRIT3Q3SXY7 679 aa15.05■□□□□ -0
GPN3-208ENST00000550974 USP17L1Q7RTZ2 530 aa15.05■□□□□ -0
GPN3-208ENST00000550974 APOBEC3FQ8IUX4 373 aaKnown RBP15.05■□□□□ -0
GPN3-208ENST00000550974 OGFOD1Q8N543 542 aa15.05■□□□□ -0
GPN3-208ENST00000550974 GDF15Q99988 308 aa15.05■□□□□ -0
GPN3-208ENST00000550974 KNSTRNQ9Y448 316 aa15.05■□□□□ -0
GPN3-208ENST00000550974 SH3TC1Q8TE82 1336 aa15.05■□□□□ -0
GPN3-208ENST00000550974 LAMB4A4D0S4 1761 aa15.04■□□□□ -0
GPN3-208ENST00000550974 PPP1R12BO60237 982 aaPredicted RBP15.04■□□□□ -0
GPN3-208ENST00000550974 CCL5P13501 91 aa15.04■□□□□ -0
GPN3-208ENST00000550974 MAP3K11Q16584 847 aa15.04■□□□□ -0
GPN3-208ENST00000550974 NLRP10Q86W26 655 aa15.04■□□□□ -0
GPN3-208ENST00000550974 MXD3Q9BW11 206 aa15.04■□□□□ -0
GPN3-208ENST00000550974 RNF208Q9H0X6 261 aa15.04■□□□□ -0
GPN3-208ENST00000550974 TAF7Q15545 349 aaPredicted RBP15.03■□□□□ -0
GPN3-208ENST00000550974 THUMPD2Q9BTF0 503 aaKnown RBP15.03■□□□□ -0
GPN3-208ENST00000550974 ANKIB1Q9P2G1 1089 aa15.03■□□□□ -0
GPN3-208ENST00000550974 PRKAR2BP31323 418 aa15.02■□□□□ -0
GPN3-208ENST00000550974 LACTBP83111 547 aaPredicted RBP15.02■□□□□ -0
GPN3-208ENST00000550974 GGA1Q9UJY5 639 aa15.02■□□□□ -0
GPN3-208ENST00000550974 ZNF646O15015 1829 aaPredicted RBP15.01□□□□□ -0.01
GPN3-208ENST00000550974 IRS2Q9Y4H2 1338 aa15.01□□□□□ -0.01
GPN3-208ENST00000550974 PRMT2P55345 433 aa15.01□□□□□ -0.01
GPN3-208ENST00000550974 U2AF1L4Q8WU68 220 aaKnown RBP15.01□□□□□ -0.01
GPN3-208ENST00000550974 FBXW7Q969H0 707 aa15.01□□□□□ -0.01
GPN3-208ENST00000550974 GUCD1Q96NT3 240 aa15.01□□□□□ -0.01
GPN3-208ENST00000550974 DEFB129Q9H1M3 183 aa15.01□□□□□ -0.01
GPN3-208ENST00000550974 BIN2Q9UBW5 565 aaPredicted RBP15.01□□□□□ -0.01
GPN3-208ENST00000550974 SPTBN5Q9NRC6 3674 aaKnown RBP15.01□□□□□ -0.01
GPN3-208ENST00000550974 GNRH1P01148 92 aa15□□□□□ -0.01
GPN3-208ENST00000550974 GRK4P32298 578 aa15□□□□□ -0.01
GPN3-208ENST00000550974 TDHQ8IZJ6 230 aa15□□□□□ -0.01
GPN3-208ENST00000550974 OPTNQ96CV9 577 aa15□□□□□ -0.01
GPN3-208ENST00000550974 FAM161BQ96MY7 647 aa15□□□□□ -0.01
GPN3-208ENST00000550974 PODXL2Q9NZ53 605 aa15□□□□□ -0.01
GPN3-208ENST00000550974 ZMYND8Q9ULU4 1186 aaPredicted RBP15□□□□□ -0.01
GPN3-208ENST00000550974 COL4A1P02462 1669 aa15□□□□□ -0.01
GPN3-208ENST00000550974 ZSWIM8A7E2V4 1837 aa14.99□□□□□ -0.01
GPN3-208ENST00000550974 LAMB1P07942 1786 aa14.99□□□□□ -0.01
GPN3-208ENST00000550974 UNCXA6NJT0 531 aa14.99□□□□□ -0.01
GPN3-208ENST00000550974 RPS8P62241 208 aaKnown RBP14.99□□□□□ -0.01
GPN3-208ENST00000550974 SF3B3Q15393 1217 aaKnown RBP14.99□□□□□ -0.01
GPN3-208ENST00000550974 HSP90AB3PQ58FF7 597 aa14.99□□□□□ -0.01
GPN3-208ENST00000550974 PODNQ7Z5L7 613 aa14.99□□□□□ -0.01
GPN3-208ENST00000550974 FAM43AQ8N2R8 423 aa14.99□□□□□ -0.01
GPN3-208ENST00000550974 RAET1EQ8TD07 263 aa14.99□□□□□ -0.01
GPN3-208ENST00000550974 BRI3BPQ8WY22 251 aa14.99□□□□□ -0.01
GPN3-208ENST00000550974 SYMPKQ92797 1274 aaKnown RBP14.99□□□□□ -0.01
GPN3-208ENST00000550974 MS4A4AQ96JQ5 239 aa14.99□□□□□ -0.01
GPN3-208ENST00000550974 ELP3Q9H9T3 547 aa14.99□□□□□ -0.01
GPN3-208ENST00000550974 RIPOR2Q9Y4F9 1068 aa14.99□□□□□ -0.01
GPN3-208ENST00000550974 SSC5DA1L4H1 1573 aa14.98□□□□□ -0.01
GPN3-208ENST00000550974 CCL15-CCL14A0A0B4J2E2 113 aa14.98□□□□□ -0.01
GPN3-208ENST00000550974 HOXD11P31277 338 aaPredicted RBP14.98□□□□□ -0.01
GPN3-208ENST00000550974 IREB2P48200 963 aaKnown RBP14.98□□□□□ -0.01
GPN3-208ENST00000550974 CCL15Q16663 113 aa14.98□□□□□ -0.01
GPN3-208ENST00000550974 AMER1Q5JTC6 1135 aaPredicted RBP14.98□□□□□ -0.01
GPN3-208ENST00000550974 ANKRD13AQ8IZ07 590 aa14.98□□□□□ -0.01
GPN3-208ENST00000550974 C7orf61Q8IZ16 206 aa14.98□□□□□ -0.01
GPN3-208ENST00000550974 TRIM47Q96LD4 638 aa14.98□□□□□ -0.01
GPN3-208ENST00000550974 WDHD1O75717 1129 aaPredicted RBP14.97□□□□□ -0.01
GPN3-208ENST00000550974 SGPL1O95470 568 aa14.97□□□□□ -0.01
GPN3-208ENST00000550974 EIF4A1P60842 406 aaKnown RBP14.97□□□□□ -0.01
GPN3-208ENST00000550974 UBXN2AP68543 259 aa14.97□□□□□ -0.01
GPN3-208ENST00000550974 DACT2Q5SW24 774 aa14.97□□□□□ -0.01
GPN3-208ENST00000550974 SRRDQ9UH36 339 aa14.97□□□□□ -0.01
GPN3-208ENST00000550974 TMEM265A0A087WTH1 108 aa14.96□□□□□ -0.01
GPN3-208ENST00000550974 TLR2O60603 784 aa14.96□□□□□ -0.01
GPN3-208ENST00000550974 USP2O75604 605 aaPredicted RBP14.96□□□□□ -0.01
GPN3-208ENST00000550974 TFRCP02786 760 aaKnown RBP14.96□□□□□ -0.01
GPN3-208ENST00000550974 ANXA1P04083 346 aa14.96□□□□□ -0.01
GPN3-208ENST00000550974 SYN1P17600 705 aa14.96□□□□□ -0.01
GPN3-208ENST00000550974 SUPT20HL1Q3ZLR7 823 aa14.96□□□□□ -0.01
GPN3-208ENST00000550974 RSPH6AQ9H0K4 717 aa14.96□□□□□ -0.01
GPN3-208ENST00000550974 UNC93B1Q9H1C4 597 aa14.96□□□□□ -0.01
GPN3-208ENST00000550974 COL1A1P02452 1464 aaPredicted RBP14.95□□□□□ -0.02
GPN3-208ENST00000550974 PSME4Q14997 1843 aa14.95□□□□□ -0.02
GPN3-208ENST00000550974 MAGEA10P43363 369 aaPredicted RBP14.95□□□□□ -0.02
GPN3-208ENST00000550974 AIMP1Q12904 312 aaKnown RBP14.95□□□□□ -0.02
GPN3-208ENST00000550974 NBPF12Q5TAG4 269 aaPredicted RBP14.95□□□□□ -0.02
GPN3-208ENST00000550974 LRP10Q7Z4F1 713 aa14.95□□□□□ -0.02
GPN3-208ENST00000550974 KIAA0825Q8IV33 1275 aa14.95□□□□□ -0.02
GPN3-208ENST00000550974 CNKSR2Q8WXI2 1034 aa14.95□□□□□ -0.02
GPN3-208ENST00000550974 FAM89AQ96GI7 184 aa14.95□□□□□ -0.02
GPN3-208ENST00000550974 UBE2OQ9C0C9 1292 aaKnown RBP14.95□□□□□ -0.02
GPN3-208ENST00000550974 MYO3BQ8WXR4 1341 aa14.94□□□□□ -0.02
GPN3-208ENST00000550974 TNFRSF10AO00220 468 aa14.94□□□□□ -0.02
GPN3-208ENST00000550974 OSBPP22059 807 aa14.94□□□□□ -0.02
GPN3-208ENST00000550974 HOXD10P28358 340 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms