RNA–Protein interactions for RNA: ENST00000550647.5

RAB3IP-213, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 742 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-213ENST00000550647 HCN2Q9UL51 889 aa7.76□□□□□ -1.17
RAB3IP-213ENST00000550647 GARTP22102 1010 aa7.75□□□□□ -1.17
RAB3IP-213ENST00000550647 SOX9P48436 509 aa7.75□□□□□ -1.17
RAB3IP-213ENST00000550647 SPEM2Q0P670 501 aa7.75□□□□□ -1.17
RAB3IP-213ENST00000550647 DTHD1Q6ZMT9 781 aa7.75□□□□□ -1.17
RAB3IP-213ENST00000550647 TRIM22Q8IYM9 498 aa7.75□□□□□ -1.17
RAB3IP-213ENST00000550647 TMEM102Q8N9M5 508 aaPredicted RBP7.75□□□□□ -1.17
RAB3IP-213ENST00000550647 OSBPL2Q9H1P3 480 aa7.75□□□□□ -1.17
RAB3IP-213ENST00000550647 STRN4Q9NRL3 753 aa7.75□□□□□ -1.17
RAB3IP-213ENST00000550647 TMA7Q9Y2S6 64 aaKnown RBP7.75□□□□□ -1.17
RAB3IP-213ENST00000550647 TLDC2A0PJX2 215 aa7.74□□□□□ -1.17
RAB3IP-213ENST00000550647 NFKBIEO00221 500 aa7.74□□□□□ -1.17
RAB3IP-213ENST00000550647 KHNYNO15037 678 aaKnown RBP7.74□□□□□ -1.17
RAB3IP-213ENST00000550647 BNIP3LO60238 219 aa7.74□□□□□ -1.17
RAB3IP-213ENST00000550647 NFKB1P19838 968 aa7.74□□□□□ -1.17
RAB3IP-213ENST00000550647 RPS26P62854 115 aaKnown RBP7.74□□□□□ -1.17
RAB3IP-213ENST00000550647 LMNB2Q03252 620 aa7.74□□□□□ -1.17
RAB3IP-213ENST00000550647 COL13A1Q5TAT6 717 aaPredicted RBP7.74□□□□□ -1.17
RAB3IP-213ENST00000550647 KRT25Q7Z3Z0 450 aa7.74□□□□□ -1.17
RAB3IP-213ENST00000550647 EAF1Q96JC9 268 aaPredicted RBP7.74□□□□□ -1.17
RAB3IP-213ENST00000550647 PNMA5Q96PV4 448 aa7.74□□□□□ -1.17
RAB3IP-213ENST00000550647 OSMRQ99650 979 aa7.74□□□□□ -1.17
RAB3IP-213ENST00000550647 DCDC2BA2VCK2 349 aa7.73□□□□□ -1.17
RAB3IP-213ENST00000550647 AXIN1O15169 862 aa7.73□□□□□ -1.17
RAB3IP-213ENST00000550647 MAN1A2O60476 641 aa7.73□□□□□ -1.17
RAB3IP-213ENST00000550647 GBP2P32456 591 aaPredicted RBP7.73□□□□□ -1.17
RAB3IP-213ENST00000550647 LIG3P49916 1009 aa7.73□□□□□ -1.17
RAB3IP-213ENST00000550647 SERINC3Q13530 473 aa7.73□□□□□ -1.17
RAB3IP-213ENST00000550647 NCAPG2Q86XI2 1143 aa7.73□□□□□ -1.17
RAB3IP-213ENST00000550647 ZNF296Q8WUU4 475 aaPredicted RBP7.73□□□□□ -1.17
RAB3IP-213ENST00000550647 MKL1Q969V6 931 aa7.73□□□□□ -1.17
RAB3IP-213ENST00000550647 TRIM56Q9BRZ2 755 aaKnown RBP7.73□□□□□ -1.17
RAB3IP-213ENST00000550647 ATXN7L1Q9ULK2 861 aaPredicted RBP7.73□□□□□ -1.17
RAB3IP-213ENST00000550647 TBX22Q9Y458 520 aa7.73□□□□□ -1.17
RAB3IP-213ENST00000550647 SUPT16HQ9Y5B9 1047 aaKnown RBP7.73□□□□□ -1.17
RAB3IP-213ENST00000550647 ROBO2Q9HCK4 1378 aa7.72□□□□□ -1.17
RAB3IP-213ENST00000550647 GRIA4P48058 902 aa7.72□□□□□ -1.17
RAB3IP-213ENST00000550647 GPLD1P80108 840 aa7.72□□□□□ -1.17
RAB3IP-213ENST00000550647 PTSQ03393 145 aa7.72□□□□□ -1.17
RAB3IP-213ENST00000550647 AGMOQ6ZNB7 445 aa7.72□□□□□ -1.17
RAB3IP-213ENST00000550647 DHX32Q7L7V1 743 aaKnown RBP7.72□□□□□ -1.17
RAB3IP-213ENST00000550647 CCDC84Q86UT8 332 aaPredicted RBP7.72□□□□□ -1.17
RAB3IP-213ENST00000550647 TRPM4Q8TD43 1214 aa7.72□□□□□ -1.17
RAB3IP-213ENST00000550647 NXPE3Q969Y0 559 aa7.72□□□□□ -1.17
RAB3IP-213ENST00000550647 NECAB3Q96P71 396 aaPredicted RBP7.72□□□□□ -1.17
RAB3IP-213ENST00000550647 AAASQ9NRG9 546 aa7.72□□□□□ -1.17
RAB3IP-213ENST00000550647 AKAP2Q9Y2D5 859 aa7.72□□□□□ -1.17
RAB3IP-213ENST00000550647 ENC1O14682 589 aa7.71□□□□□ -1.18
RAB3IP-213ENST00000550647 NFX1Q12986 1120 aaKnown RBP7.71□□□□□ -1.18
RAB3IP-213ENST00000550647 DBN1Q16643 649 aa7.71□□□□□ -1.18
RAB3IP-213ENST00000550647 ZNF787Q6DD87 383 aa7.71□□□□□ -1.18
RAB3IP-213ENST00000550647 ZNF746Q6NUN9 644 aaPredicted RBP7.71□□□□□ -1.18
RAB3IP-213ENST00000550647 FBXL19Q6PCT2 694 aa7.71□□□□□ -1.18
RAB3IP-213ENST00000550647 CKAP2LQ8IYA6 745 aa7.71□□□□□ -1.18
RAB3IP-213ENST00000550647 PMFBP1Q8TBY8 1022 aa7.71□□□□□ -1.18
RAB3IP-213ENST00000550647 SLC30A3Q99726 388 aa7.71□□□□□ -1.18
RAB3IP-213ENST00000550647 LRRC3Q9BY71 257 aa7.71□□□□□ -1.18
RAB3IP-213ENST00000550647 ZNF576Q9H609 170 aa7.71□□□□□ -1.18
RAB3IP-213ENST00000550647 PIF1Q9H611 641 aa7.71□□□□□ -1.18
RAB3IP-213ENST00000550647 A0A096LPE4 126 aa7.7□□□□□ -1.18
RAB3IP-213ENST00000550647 A0A1W2PPZ6 126 aa7.7□□□□□ -1.18
RAB3IP-213ENST00000550647 CELA3AP09093 270 aa7.7□□□□□ -1.18
RAB3IP-213ENST00000550647 ACPPP15309 386 aa7.7□□□□□ -1.18
RAB3IP-213ENST00000550647 NCLP19338 710 aaKnown RBP7.7□□□□□ -1.18
RAB3IP-213ENST00000550647 NASPP49321 788 aaPredicted RBP7.7□□□□□ -1.18
RAB3IP-213ENST00000550647 NFE2L2Q16236 605 aa7.7□□□□□ -1.18
RAB3IP-213ENST00000550647 PCSK7Q16549 785 aa7.7□□□□□ -1.18
RAB3IP-213ENST00000550647 RIPOR1Q6ZS17 1223 aa7.7□□□□□ -1.18
RAB3IP-213ENST00000550647 SLITRK4Q8IW52 837 aa7.7□□□□□ -1.18
RAB3IP-213ENST00000550647 ZSWIM4Q9H7M6 989 aa7.7□□□□□ -1.18
RAB3IP-213ENST00000550647 ATP13A2Q9NQ11 1180 aa7.7□□□□□ -1.18
RAB3IP-213ENST00000550647 SEC31BQ9NQW1 1179 aa7.7□□□□□ -1.18
RAB3IP-213ENST00000550647 MINDY4BA8MYZ0 360 aa7.69□□□□□ -1.18
RAB3IP-213ENST00000550647 ST8SIA5O15466 376 aa7.69□□□□□ -1.18
RAB3IP-213ENST00000550647 CAMK2GQ13555 558 aaPredicted RBP7.69□□□□□ -1.18
RAB3IP-213ENST00000550647 NEUROD1Q13562 356 aa7.69□□□□□ -1.18
RAB3IP-213ENST00000550647 GRIN2CQ14957 1233 aa7.69□□□□□ -1.18
RAB3IP-213ENST00000550647 TPTE2Q6XPS3 522 aa7.69□□□□□ -1.18
RAB3IP-213ENST00000550647 CCDC155Q8N6L0 562 aa7.69□□□□□ -1.18
RAB3IP-213ENST00000550647 ZNF837Q96EG3 531 aaPredicted RBP7.69□□□□□ -1.18
RAB3IP-213ENST00000550647 ABHD17AQ96GS6 310 aa7.69□□□□□ -1.18
RAB3IP-213ENST00000550647 ZNF408Q9H9D4 720 aa7.69□□□□□ -1.18
RAB3IP-213ENST00000550647 GINM1Q9NU53 330 aa7.69□□□□□ -1.18
RAB3IP-213ENST00000550647 EFR3BQ9Y2G0 817 aa7.69□□□□□ -1.18
RAB3IP-213ENST00000550647 LOC102724428A0A0B4J2F2 783 aa7.68□□□□□ -1.18
RAB3IP-213ENST00000550647 PDE2AO00408 941 aaPredicted RBP7.68□□□□□ -1.18
RAB3IP-213ENST00000550647 FBXO24O75426 580 aa7.68□□□□□ -1.18
RAB3IP-213ENST00000550647 PF4P02776 101 aa7.68□□□□□ -1.18
RAB3IP-213ENST00000550647 SSBP05455 408 aaKnown RBP eCLIP7.68□□□□□ -1.18
RAB3IP-213ENST00000550647 SIK1P57059 783 aa7.68□□□□□ -1.18
RAB3IP-213ENST00000550647 SPRED3Q2MJR0 410 aa7.68□□□□□ -1.18
RAB3IP-213ENST00000550647 SDE2Q6IQ49 451 aa7.68□□□□□ -1.18
RAB3IP-213ENST00000550647 FAM196AQ6ZSG2 479 aa7.68□□□□□ -1.18
RAB3IP-213ENST00000550647 TRIM42Q8IWZ5 723 aa7.68□□□□□ -1.18
RAB3IP-213ENST00000550647 BHMTQ93088 406 aa7.68□□□□□ -1.18
RAB3IP-213ENST00000550647 SPACA7Q96KW9 195 aa7.68□□□□□ -1.18
RAB3IP-213ENST00000550647 PBX4Q9BYU1 374 aa7.68□□□□□ -1.18
RAB3IP-213ENST00000550647 PHF24Q9UPV7 400 aa7.68□□□□□ -1.18
RAB3IP-213ENST00000550647 KLF4O43474 513 aa7.67□□□□□ -1.18
RAB3IP-213ENST00000550647 TFE3P19532 575 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms