RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 MYOZ2Q9NPC6 264 aa13.9□□□□□ -0.18
PFDN5-210ENST00000550513 BSDC1Q9NW68 430 aaPredicted RBP13.9□□□□□ -0.18
PFDN5-210ENST00000550513 FANCIQ9NVI1 1328 aa13.9□□□□□ -0.19
PFDN5-210ENST00000550513 OTOFQ9HC10 1997 aa13.89□□□□□ -0.19
PFDN5-210ENST00000550513 CCDC85CA6NKD9 419 aa13.89□□□□□ -0.19
PFDN5-210ENST00000550513 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
PFDN5-210ENST00000550513 SLC10A3P09131 477 aa13.89□□□□□ -0.19
PFDN5-210ENST00000550513 IGHMBP2P38935 993 aaKnown RBP13.89□□□□□ -0.19
PFDN5-210ENST00000550513 CCT4P50991 539 aaKnown RBP13.89□□□□□ -0.19
PFDN5-210ENST00000550513 SCARF1Q14162 830 aa13.89□□□□□ -0.19
PFDN5-210ENST00000550513 FBXW7Q969H0 707 aa13.89□□□□□ -0.19
PFDN5-210ENST00000550513 GMLQ99445 158 aa13.89□□□□□ -0.19
PFDN5-210ENST00000550513 MYH16Q9H6N6 1097 aa13.89□□□□□ -0.19
PFDN5-210ENST00000550513 MINPP1Q9UNW1 487 aa13.89□□□□□ -0.19
PFDN5-210ENST00000550513 MYO3BQ8WXR4 1341 aa13.89□□□□□ -0.19
PFDN5-210ENST00000550513 FLIIQ13045 1269 aa13.88□□□□□ -0.19
PFDN5-210ENST00000550513 FKBP5Q13451 457 aaPredicted RBP13.88□□□□□ -0.19
PFDN5-210ENST00000550513 FAM161AQ3B820 660 aa13.88□□□□□ -0.19
PFDN5-210ENST00000550513 MCOLN1Q9GZU1 580 aa13.88□□□□□ -0.19
PFDN5-210ENST00000550513 SAGE1Q9NXZ1 904 aa13.88□□□□□ -0.19
PFDN5-210ENST00000550513 WTIPA6NIX2 430 aaPredicted RBP13.87□□□□□ -0.19
PFDN5-210ENST00000550513 H7C1W4 665 aa13.87□□□□□ -0.19
PFDN5-210ENST00000550513 ITGA6P23229 1130 aa13.87□□□□□ -0.19
PFDN5-210ENST00000550513 KIF23Q02241 960 aaPredicted RBP13.87□□□□□ -0.19
PFDN5-210ENST00000550513 GCKRQ14397 625 aa13.87□□□□□ -0.19
PFDN5-210ENST00000550513 DACT2Q5SW24 774 aa13.87□□□□□ -0.19
PFDN5-210ENST00000550513 PLA2G12BQ9BX93 195 aa13.87□□□□□ -0.19
PFDN5-210ENST00000550513 MRS2Q9HD23 443 aa13.87□□□□□ -0.19
PFDN5-210ENST00000550513 FKBP1BP68106 108 aa13.86□□□□□ -0.19
PFDN5-210ENST00000550513 DGKZQ13574 1117 aa13.86□□□□□ -0.19
PFDN5-210ENST00000550513 NCBP3Q53F19 620 aaKnown RBP13.86□□□□□ -0.19
PFDN5-210ENST00000550513 RASAL3Q86YV0 1011 aa13.86□□□□□ -0.19
PFDN5-210ENST00000550513 OGFOD1Q8N543 542 aa13.86□□□□□ -0.19
PFDN5-210ENST00000550513 DNAAF4Q8WXU2 420 aa13.86□□□□□ -0.19
PFDN5-210ENST00000550513 MPHOSPH8Q99549 860 aa13.86□□□□□ -0.19
PFDN5-210ENST00000550513 COA1Q9GZY4 146 aa13.86□□□□□ -0.19
PFDN5-210ENST00000550513 LEMD3Q9Y2U8 911 aa13.86□□□□□ -0.19
PFDN5-210ENST00000550513 ZNF804BA4D1E1 1349 aa13.86□□□□□ -0.19
PFDN5-210ENST00000550513 STRIP1Q5VSL9 837 aa13.85□□□□□ -0.19
PFDN5-210ENST00000550513 LINS1Q8NG48 757 aa13.85□□□□□ -0.19
PFDN5-210ENST00000550513 MXD3Q9BW11 206 aa13.85□□□□□ -0.19
PFDN5-210ENST00000550513 ANKRD2Q9GZV1 360 aa13.85□□□□□ -0.19
PFDN5-210ENST00000550513 SCAF8Q9UPN6 1271 aaKnown RBP13.85□□□□□ -0.19
PFDN5-210ENST00000550513 COL1A1P02452 1464 aaPredicted RBP13.85□□□□□ -0.19
PFDN5-210ENST00000550513 KLRK1P26718 216 aa13.84□□□□□ -0.19
PFDN5-210ENST00000550513 KCNJ4P48050 445 aa13.84□□□□□ -0.19
PFDN5-210ENST00000550513 CASP7P55210 303 aa13.84□□□□□ -0.19
PFDN5-210ENST00000550513 NBPF9Q3BBW0 867 aa13.84□□□□□ -0.19
PFDN5-210ENST00000550513 TXNRD3Q86VQ6 643 aa13.84□□□□□ -0.19
PFDN5-210ENST00000550513 RNF186Q9NXI6 227 aa13.84□□□□□ -0.19
PFDN5-210ENST00000550513 WNT10BO00744 389 aa13.83□□□□□ -0.2
PFDN5-210ENST00000550513 TRPA1O75762 1119 aa13.83□□□□□ -0.2
PFDN5-210ENST00000550513 SASH1O94885 1247 aa13.83□□□□□ -0.2
PFDN5-210ENST00000550513 CHRNDQ07001 517 aa13.83□□□□□ -0.2
PFDN5-210ENST00000550513 REM2Q8IYK8 340 aaPredicted RBP13.83□□□□□ -0.2
PFDN5-210ENST00000550513 SALL2Q9Y467 1007 aaPredicted RBP13.83□□□□□ -0.2
PFDN5-210ENST00000550513 ANKRD18BA2A2Z9 1011 aa13.82□□□□□ -0.2
PFDN5-210ENST00000550513 ANP32CO43423 234 aa13.82□□□□□ -0.2
PFDN5-210ENST00000550513 CSF1RP07333 972 aa13.82□□□□□ -0.2
PFDN5-210ENST00000550513 NF2P35240 595 aa13.82□□□□□ -0.2
PFDN5-210ENST00000550513 MLLT1Q03111 559 aaPredicted RBP13.82□□□□□ -0.2
PFDN5-210ENST00000550513 EXOSC9Q06265 439 aaKnown RBP13.82□□□□□ -0.2
PFDN5-210ENST00000550513 TTLL12Q14166 644 aaPredicted RBP13.82□□□□□ -0.2
PFDN5-210ENST00000550513 MOB2Q70IA6 237 aa13.82□□□□□ -0.2
PFDN5-210ENST00000550513 KIAA0825Q8IV33 1275 aa13.82□□□□□ -0.2
PFDN5-210ENST00000550513 WDR63Q8IWG1 891 aa13.82□□□□□ -0.2
PFDN5-210ENST00000550513 CSRNP1Q96S65 589 aa13.82□□□□□ -0.2
PFDN5-210ENST00000550513 HDAC9Q9UKV0 1011 aa13.82□□□□□ -0.2
PFDN5-210ENST00000550513 TNRC18O15417 2968 aaPredicted RBP13.82□□□□□ -0.2
PFDN5-210ENST00000550513 VAMP4O75379 141 aa13.81□□□□□ -0.2
PFDN5-210ENST00000550513 MMP14P50281 582 aa13.81□□□□□ -0.2
PFDN5-210ENST00000550513 GTF2IP78347 998 aa13.81□□□□□ -0.2
PFDN5-210ENST00000550513 TTLL5Q6EMB2 1281 aa13.81□□□□□ -0.2
PFDN5-210ENST00000550513 APOBEC3FQ8IUX4 373 aaKnown RBP13.81□□□□□ -0.2
PFDN5-210ENST00000550513 CHMP3Q9Y3E7 222 aa13.81□□□□□ -0.2
PFDN5-210ENST00000550513 F6X3S4 739 aa13.8□□□□□ -0.2
PFDN5-210ENST00000550513 RGS19P49795 217 aa13.8□□□□□ -0.2
PFDN5-210ENST00000550513 IFIT5Q13325 482 aaKnown RBP13.8□□□□□ -0.2
PFDN5-210ENST00000550513 PRAMEF18Q5VWM3 479 aa13.8□□□□□ -0.2
PFDN5-210ENST00000550513 UBE2Q2LH0YL09 131 aa13.79□□□□□ -0.2
PFDN5-210ENST00000550513 FOXO4P98177 505 aa13.79□□□□□ -0.2
PFDN5-210ENST00000550513 CD209Q9NNX6 404 aa13.79□□□□□ -0.2
PFDN5-210ENST00000550513 IRS2Q9Y4H2 1338 aa13.79□□□□□ -0.2
PFDN5-210ENST00000550513 SSC5DA1L4H1 1573 aa13.79□□□□□ -0.2
PFDN5-210ENST00000550513 RBBP6Q7Z6E9 1792 aaKnown RBP13.78□□□□□ -0.2
PFDN5-210ENST00000550513 TAF5LO75529 589 aa13.78□□□□□ -0.2
PFDN5-210ENST00000550513 BEND3Q5T5X7 828 aa13.78□□□□□ -0.2
PFDN5-210ENST00000550513 ZNF804AQ7Z570 1209 aa13.78□□□□□ -0.2
PFDN5-210ENST00000550513 SNAP23O00161 211 aa13.77□□□□□ -0.21
PFDN5-210ENST00000550513 GRM8O00222 908 aa13.77□□□□□ -0.21
PFDN5-210ENST00000550513 CCDC57Q2TAC2 916 aa13.77□□□□□ -0.21
PFDN5-210ENST00000550513 TAF7LQ5H9L4 462 aa13.77□□□□□ -0.21
PFDN5-210ENST00000550513 C15orf52Q6ZUT6 534 aaKnown RBP13.77□□□□□ -0.21
PFDN5-210ENST00000550513 ARMC9Q7Z3E5 817 aa13.77□□□□□ -0.21
PFDN5-210ENST00000550513 CTU1Q7Z7A3 348 aaKnown RBP13.77□□□□□ -0.21
PFDN5-210ENST00000550513 HELBQ8NG08 1087 aaPredicted RBP13.77□□□□□ -0.21
PFDN5-210ENST00000550513 ZBED3Q96IU2 234 aaPredicted RBP13.77□□□□□ -0.21
PFDN5-210ENST00000550513 SREBF2Q12772 1141 aa13.76□□□□□ -0.21
PFDN5-210ENST00000550513 MKRN3Q13064 507 aaKnown RBP13.76□□□□□ -0.21
PFDN5-210ENST00000550513 PRKG1Q13976 671 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms