RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 MYO3BQ8WXR4 1341 aa29.48■■■□□ 2.31
SMARCD1-209ENST00000550477 PITPNM2Q9BZ72 1349 aa29.48■■■□□ 2.31
SMARCD1-209ENST00000550477 KIF23Q02241 960 aaPredicted RBP29.48■■■□□ 2.31
SMARCD1-209ENST00000550477 GMLQ99445 158 aa29.48■■■□□ 2.31
SMARCD1-209ENST00000550477 ANKRD2Q9GZV1 360 aa29.48■■■□□ 2.31
SMARCD1-209ENST00000550477 COA1Q9GZY4 146 aa29.48■■■□□ 2.31
SMARCD1-209ENST00000550477 FAM155AB1AL88 458 aaPredicted RBP29.47■■■□□ 2.31
SMARCD1-209ENST00000550477 FKBP5Q13451 457 aaPredicted RBP29.47■■■□□ 2.31
SMARCD1-209ENST00000550477 FBXW7Q969H0 707 aa29.47■■■□□ 2.31
SMARCD1-209ENST00000550477 ZIC5Q96T25 663 aa29.47■■■□□ 2.31
SMARCD1-209ENST00000550477 FLIIQ13045 1269 aa29.46■■■□□ 2.31
SMARCD1-209ENST00000550477 DGKZQ13574 1117 aa29.46■■■□□ 2.31
SMARCD1-209ENST00000550477 MCOLN1Q9GZU1 580 aa29.46■■■□□ 2.31
SMARCD1-209ENST00000550477 PSME4Q14997 1843 aa29.45■■■□□ 2.31
SMARCD1-209ENST00000550477 GCKRQ14397 625 aa29.45■■■□□ 2.31
SMARCD1-209ENST00000550477 STRIP1Q5VSL9 837 aa29.45■■■□□ 2.31
SMARCD1-209ENST00000550477 PLA2G12BQ9BX93 195 aa29.45■■■□□ 2.31
SMARCD1-209ENST00000550477 ASTN2O75129 1339 aaPredicted RBP29.45■■■□□ 2.3
SMARCD1-209ENST00000550477 SLC10A3P09131 477 aa29.44■■■□□ 2.3
SMARCD1-209ENST00000550477 G2E3Q7L622 706 aa29.44■■■□□ 2.3
SMARCD1-209ENST00000550477 DNAAF4Q8WXU2 420 aa29.44■■■□□ 2.3
SMARCD1-209ENST00000550477 ITGA6P23229 1130 aa29.43■■■□□ 2.3
SMARCD1-209ENST00000550477 NF2P35240 595 aa29.43■■■□□ 2.3
SMARCD1-209ENST00000550477 KCNJ4P48050 445 aa29.43■■■□□ 2.3
SMARCD1-209ENST00000550477 LINS1Q8NG48 757 aa29.43■■■□□ 2.3
SMARCD1-209ENST00000550477 MLLT1Q03111 559 aaPredicted RBP29.42■■■□□ 2.3
SMARCD1-209ENST00000550477 MRS2Q9HD23 443 aa29.42■■■□□ 2.3
SMARCD1-209ENST00000550477 HDAC9Q9UKV0 1011 aa29.42■■■□□ 2.3
SMARCD1-209ENST00000550477 CACNA1FO60840 1977 aa29.42■■■□□ 2.3
SMARCD1-209ENST00000550477 ZNF804BA4D1E1 1349 aa29.42■■■□□ 2.3
SMARCD1-209ENST00000550477 AKAP11Q9UKA4 1901 aa29.41■■■□□ 2.3
SMARCD1-209ENST00000550477 TRPA1O75762 1119 aa29.41■■■□□ 2.3
SMARCD1-209ENST00000550477 CCDC184Q52MB2 194 aa29.41■■■□□ 2.3
SMARCD1-209ENST00000550477 WDR63Q8IWG1 891 aa29.41■■■□□ 2.3
SMARCD1-209ENST00000550477 FAM161AQ3B820 660 aa29.4■■■□□ 2.3
SMARCD1-209ENST00000550477 DACT2Q5SW24 774 aa29.4■■■□□ 2.3
SMARCD1-209ENST00000550477 TTLL5Q6EMB2 1281 aa29.4■■■□□ 2.3
SMARCD1-209ENST00000550477 RNF186Q9NXI6 227 aa29.4■■■□□ 2.3
SMARCD1-209ENST00000550477 ANKRD18BA2A2Z9 1011 aa29.39■■■□□ 2.3
SMARCD1-209ENST00000550477 ANP32CO43423 234 aa29.39■■■□□ 2.3
SMARCD1-209ENST00000550477 TTLL12Q14166 644 aaPredicted RBP29.39■■■□□ 2.3
SMARCD1-209ENST00000550477 CSRNP1Q96S65 589 aa29.39■■■□□ 2.3
SMARCD1-209ENST00000550477 CSF1RP07333 972 aa29.38■■■□□ 2.29
SMARCD1-209ENST00000550477 SPEF2Q9C093 1822 aa29.38■■■□□ 2.29
SMARCD1-209ENST00000550477 WTIPA6NIX2 430 aaPredicted RBP29.37■■■□□ 2.29
SMARCD1-209ENST00000550477 RGS19P49795 217 aa29.37■■■□□ 2.29
SMARCD1-209ENST00000550477 NBPF9Q3BBW0 867 aa29.37■■■□□ 2.29
SMARCD1-209ENST00000550477 FANCIQ9NVI1 1328 aa29.37■■■□□ 2.29
SMARCD1-209ENST00000550477 PAPPA2Q9BXP8 1791 aa29.35■■■□□ 2.29
SMARCD1-209ENST00000550477 WNT10BO00744 389 aa29.35■■■□□ 2.29
SMARCD1-209ENST00000550477 VAMP4O75379 141 aa29.35■■■□□ 2.29
SMARCD1-209ENST00000550477 IFIT5Q13325 482 aaKnown RBP29.35■■■□□ 2.29
SMARCD1-209ENST00000550477 RASAL3Q86YV0 1011 aa29.35■■■□□ 2.29
SMARCD1-209ENST00000550477 SALL2Q9Y467 1007 aaPredicted RBP29.35■■■□□ 2.29
SMARCD1-209ENST00000550477 CASP7P55210 303 aa29.34■■■□□ 2.29
SMARCD1-209ENST00000550477 CHRNDQ07001 517 aa29.34■■■□□ 2.29
SMARCD1-209ENST00000550477 TXNRD3Q86VQ6 643 aa29.34■■■□□ 2.29
SMARCD1-209ENST00000550477 MXD3Q9BW11 206 aa29.34■■■□□ 2.29
SMARCD1-209ENST00000550477 CHMP3Q9Y3E7 222 aa29.34■■■□□ 2.29
SMARCD1-209ENST00000550477 GTF2IP78347 998 aa29.33■■■□□ 2.29
SMARCD1-209ENST00000550477 APOBEC3FQ8IUX4 373 aaKnown RBP29.33■■■□□ 2.29
SMARCD1-209ENST00000550477 ARMC9Q7Z3E5 817 aa29.32■■■□□ 2.28
SMARCD1-209ENST00000550477 UBE2Q2LH0YL09 131 aa29.31■■■□□ 2.28
SMARCD1-209ENST00000550477 EXOSC9Q06265 439 aaKnown RBP29.31■■■□□ 2.28
SMARCD1-209ENST00000550477 KIAA0825Q8IV33 1275 aa29.31■■■□□ 2.28
SMARCD1-209ENST00000550477 SCAF8Q9UPN6 1271 aaKnown RBP29.31■■■□□ 2.28
SMARCD1-209ENST00000550477 ZEB1P37275 1124 aaPredicted RBP29.3■■■□□ 2.28
SMARCD1-209ENST00000550477 TAF7LQ5H9L4 462 aa29.3■■■□□ 2.28
SMARCD1-209ENST00000550477 CD209Q9NNX6 404 aa29.3■■■□□ 2.28
SMARCD1-209ENST00000550477 PRAMEF18Q5VWM3 479 aa29.29■■■□□ 2.28
SMARCD1-209ENST00000550477 SASH1O94885 1247 aa29.28■■■□□ 2.28
SMARCD1-209ENST00000550477 DLGAP5Q15398 846 aa29.28■■■□□ 2.28
SMARCD1-209ENST00000550477 CCDC57Q2TAC2 916 aa29.28■■■□□ 2.28
SMARCD1-209ENST00000550477 MOB2Q70IA6 237 aa29.28■■■□□ 2.28
SMARCD1-209ENST00000550477 ZNF804AQ7Z570 1209 aa29.28■■■□□ 2.28
SMARCD1-209ENST00000550477 CTU1Q7Z7A3 348 aaKnown RBP29.27■■■□□ 2.28
SMARCD1-209ENST00000550477 MYO1BO43795 1136 aa29.26■■■□□ 2.27
SMARCD1-209ENST00000550477 C15orf52Q6ZUT6 534 aaKnown RBP29.26■■■□□ 2.27
SMARCD1-209ENST00000550477 C9orf78Q9NZ63 289 aaPredicted RBP29.26■■■□□ 2.27
SMARCD1-209ENST00000550477 TAF5LO75529 589 aa29.25■■■□□ 2.27
SMARCD1-209ENST00000550477 KLRK1P26718 216 aa29.25■■■□□ 2.27
SMARCD1-209ENST00000550477 SREBF2Q12772 1141 aa29.25■■■□□ 2.27
SMARCD1-209ENST00000550477 BEND3Q5T5X7 828 aa29.25■■■□□ 2.27
SMARCD1-209ENST00000550477 F6X3S4 739 aa29.24■■■□□ 2.27
SMARCD1-209ENST00000550477 FOXO4P98177 505 aa29.24■■■□□ 2.27
SMARCD1-209ENST00000550477 LDHAL6AQ6ZMR3 332 aa29.24■■■□□ 2.27
SMARCD1-209ENST00000550477 TM4SF4P48230 202 aa29.23■■■□□ 2.27
SMARCD1-209ENST00000550477 LMBR1LQ6UX01 489 aa29.23■■■□□ 2.27
SMARCD1-209ENST00000550477 HELBQ8NG08 1087 aaPredicted RBP29.23■■■□□ 2.27
SMARCD1-209ENST00000550477 CNNM1Q9NRU3 951 aa29.23■■■□□ 2.27
SMARCD1-209ENST00000550477 GRM8O00222 908 aa29.22■■■□□ 2.27
SMARCD1-209ENST00000550477 PKN2Q16513 984 aaKnown RBP29.22■■■□□ 2.27
SMARCD1-209ENST00000550477 IL1R1P14778 569 aa29.21■■■□□ 2.27
SMARCD1-209ENST00000550477 FKBP1AP62942 108 aaKnown RBP29.21■■■□□ 2.27
SMARCD1-209ENST00000550477 PRKG1Q13976 671 aa29.21■■■□□ 2.27
SMARCD1-209ENST00000550477 PPP2R3BQ9Y5P8 575 aa29.21■■■□□ 2.27
SMARCD1-209ENST00000550477 PLIN1O60240 522 aa29.2■■■□□ 2.26
SMARCD1-209ENST00000550477 ALDH1L1O75891 902 aa29.2■■■□□ 2.26
SMARCD1-209ENST00000550477 MTMR14Q8NCE2 650 aa29.2■■■□□ 2.26
SMARCD1-209ENST00000550477 ZBED3Q96IU2 234 aaPredicted RBP29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms