RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 RANBP6O60518 1105 aaKnown RBP18.01■□□□□ 0.47
RBFOX1-212ENST00000550418 AMOTQ4VCS5 1084 aa18.01■□□□□ 0.47
RBFOX1-212ENST00000550418 DNAJC21Q5F1R6 531 aaKnown RBP18.01■□□□□ 0.47
RBFOX1-212ENST00000550418 MSL1Q68DK7 614 aa18.01■□□□□ 0.47
RBFOX1-212ENST00000550418 MPRIPQ6WCQ1 1025 aa18.01■□□□□ 0.47
RBFOX1-212ENST00000550418 CCDC114Q96M63 670 aa18.01■□□□□ 0.47
RBFOX1-212ENST00000550418 PTPDC1A2A3K4 754 aa18■□□□□ 0.47
RBFOX1-212ENST00000550418 KIF5AQ12840 1032 aa18■□□□□ 0.47
RBFOX1-212ENST00000550418 PPM1EQ8WY54 764 aa18■□□□□ 0.47
RBFOX1-212ENST00000550418 TCP11L1Q9NUJ3 509 aa18■□□□□ 0.47
RBFOX1-212ENST00000550418 A0A1B0GVL5 298 aa18■□□□□ 0.47
RBFOX1-212ENST00000550418 AMPD3Q01432 767 aa18■□□□□ 0.47
RBFOX1-212ENST00000550418 PRPF4BQ13523 1007 aaKnown RBP18■□□□□ 0.47
RBFOX1-212ENST00000550418 AFAP1L1Q8TED9 768 aa18■□□□□ 0.47
RBFOX1-212ENST00000550418 CAPZA3Q96KX2 299 aa18■□□□□ 0.47
RBFOX1-212ENST00000550418 IMPACTQ9P2X3 320 aa18■□□□□ 0.47
RBFOX1-212ENST00000550418 ANXA1P04083 346 aa18■□□□□ 0.47
RBFOX1-212ENST00000550418 CCDC40Q4G0X9 1142 aa18■□□□□ 0.47
RBFOX1-212ENST00000550418 SOS1Q07889 1333 aaPredicted RBP18■□□□□ 0.47
RBFOX1-212ENST00000550418 UHRF1BP1Q6BDS2 1440 aa17.99■□□□□ 0.47
RBFOX1-212ENST00000550418 WDHD1O75717 1129 aaPredicted RBP17.99■□□□□ 0.47
RBFOX1-212ENST00000550418 IDEP14735 1019 aa17.99■□□□□ 0.47
RBFOX1-212ENST00000550418 OAS2P29728 719 aaKnown RBP17.99■□□□□ 0.47
RBFOX1-212ENST00000550418 CATIPQ7Z7H3 387 aa17.99■□□□□ 0.47
RBFOX1-212ENST00000550418 ZBTB43O43298 467 aa17.99■□□□□ 0.47
RBFOX1-212ENST00000550418 BMP15O95972 392 aa17.99■□□□□ 0.47
RBFOX1-212ENST00000550418 HMGB2P26583 209 aaKnown RBP17.99■□□□□ 0.47
RBFOX1-212ENST00000550418 SSR1P43307 286 aaKnown RBP17.99■□□□□ 0.47
RBFOX1-212ENST00000550418 CHMP4BP1P59074 171 aa17.99■□□□□ 0.47
RBFOX1-212ENST00000550418 IFIT5Q13325 482 aaKnown RBP17.99■□□□□ 0.47
RBFOX1-212ENST00000550418 UBE4AQ14139 1066 aa17.99■□□□□ 0.47
RBFOX1-212ENST00000550418 GPT2Q8TD30 523 aa17.99■□□□□ 0.47
RBFOX1-212ENST00000550418 UHRF1BP1LA0JNW5 1464 aa17.99■□□□□ 0.47
RBFOX1-212ENST00000550418 COL17A1Q9UMD9 1497 aaPredicted RBP17.99■□□□□ 0.47
RBFOX1-212ENST00000550418 ZSCAN26Q16670 478 aa17.99■□□□□ 0.47
RBFOX1-212ENST00000550418 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.98■□□□□ 0.47
RBFOX1-212ENST00000550418 VAV2P52735 878 aa17.98■□□□□ 0.47
RBFOX1-212ENST00000550418 UBE3BQ7Z3V4 1068 aa17.98■□□□□ 0.47
RBFOX1-212ENST00000550418 BRAPQ7Z569 592 aa17.98■□□□□ 0.47
RBFOX1-212ENST00000550418 ZNF215Q9UL58 517 aaPredicted RBP17.98■□□□□ 0.47
RBFOX1-212ENST00000550418 NPC1L1Q9UHC9 1359 aa17.98■□□□□ 0.47
RBFOX1-212ENST00000550418 USP5P45974 858 aa17.98■□□□□ 0.47
RBFOX1-212ENST00000550418 RIMS2Q9UQ26 1411 aa17.98■□□□□ 0.47
RBFOX1-212ENST00000550418 CNGA4Q8IV77 575 aa17.98■□□□□ 0.47
RBFOX1-212ENST00000550418 TMEM266Q2M3C6 531 aa17.97■□□□□ 0.47
RBFOX1-212ENST00000550418 LEO1Q8WVC0 666 aaPredicted RBP17.97■□□□□ 0.47
RBFOX1-212ENST00000550418 NSRP1Q9H0G5 558 aaKnown RBP17.97■□□□□ 0.47
RBFOX1-212ENST00000550418 POLKQ9UBT6 870 aa17.97■□□□□ 0.47
RBFOX1-212ENST00000550418 AKR1B15C9JRZ8 316 aaPredicted RBP17.97■□□□□ 0.47
RBFOX1-212ENST00000550418 PKP1Q13835 747 aa17.97■□□□□ 0.47
RBFOX1-212ENST00000550418 IFI16Q16666 785 aaKnown RBP17.97■□□□□ 0.47
RBFOX1-212ENST00000550418 ANKS4BQ8N8V4 417 aa17.97■□□□□ 0.47
RBFOX1-212ENST00000550418 SNX14Q9Y5W7 946 aa17.97■□□□□ 0.47
RBFOX1-212ENST00000550418 ATP7AQ04656 1500 aa17.97■□□□□ 0.47
RBFOX1-212ENST00000550418 TUBB2AQ13885 445 aa17.97■□□□□ 0.47
RBFOX1-212ENST00000550418 DHX32Q7L7V1 743 aaKnown RBP17.97■□□□□ 0.47
RBFOX1-212ENST00000550418 TUBB2BQ9BVA1 445 aa17.97■□□□□ 0.47
RBFOX1-212ENST00000550418 SEC63Q9UGP8 760 aaKnown RBP17.97■□□□□ 0.47
RBFOX1-212ENST00000550418 RAD50Q92878 1312 aa17.97■□□□□ 0.47
RBFOX1-212ENST00000550418 APOBRQ0VD83 1088 aa17.96■□□□□ 0.47
RBFOX1-212ENST00000550418 CCDC155Q8N6L0 562 aa17.96■□□□□ 0.47
RBFOX1-212ENST00000550418 KCNH5Q8NCM2 988 aa17.96■□□□□ 0.47
RBFOX1-212ENST00000550418 STX17P56962 302 aa17.96■□□□□ 0.47
RBFOX1-212ENST00000550418 KRT24Q2M2I5 525 aa17.96■□□□□ 0.47
RBFOX1-212ENST00000550418 B4GALNT4Q76KP1 1039 aa17.96■□□□□ 0.47
RBFOX1-212ENST00000550418 SCLT1Q96NL6 688 aa17.96■□□□□ 0.47
RBFOX1-212ENST00000550418 IGHMBP2P38935 993 aaKnown RBP17.96■□□□□ 0.47
RBFOX1-212ENST00000550418 FANCCQ00597 558 aa17.96■□□□□ 0.47
RBFOX1-212ENST00000550418 CCDC42Q96M95 316 aa17.96■□□□□ 0.47
RBFOX1-212ENST00000550418 ALDH1L1O75891 902 aa17.96■□□□□ 0.47
RBFOX1-212ENST00000550418 CALML4Q96GE6 196 aa17.96■□□□□ 0.47
RBFOX1-212ENST00000550418 PSMA7O14818 248 aa17.95■□□□□ 0.46
RBFOX1-212ENST00000550418 ERCC6LQ2NKX8 1250 aa17.95■□□□□ 0.46
RBFOX1-212ENST00000550418 MFSD6Q6ZSS7 791 aa17.95■□□□□ 0.46
RBFOX1-212ENST00000550418 PHACTR3Q96KR7 559 aa17.95■□□□□ 0.46
RBFOX1-212ENST00000550418 ABCA8O94911 1581 aa17.95■□□□□ 0.46
RBFOX1-212ENST00000550418 INPP5BP32019 993 aa17.95■□□□□ 0.46
RBFOX1-212ENST00000550418 LRMPQ12912 555 aa17.95■□□□□ 0.46
RBFOX1-212ENST00000550418 CPLX4Q7Z7G2 160 aa17.95■□□□□ 0.46
RBFOX1-212ENST00000550418 NDUFAB1O14561 156 aa17.95■□□□□ 0.46
RBFOX1-212ENST00000550418 ARHGAP6O43182 974 aa17.95■□□□□ 0.46
RBFOX1-212ENST00000550418 ZFYP08048 801 aaPredicted RBP17.95■□□□□ 0.46
RBFOX1-212ENST00000550418 KIAA0753Q2KHM9 967 aa17.95■□□□□ 0.46
RBFOX1-212ENST00000550418 CFAP58Q5T655 872 aa17.95■□□□□ 0.46
RBFOX1-212ENST00000550418 DHX58Q96C10 678 aa17.95■□□□□ 0.46
RBFOX1-212ENST00000550418 IBTKQ9P2D0 1353 aaPredicted RBP17.95■□□□□ 0.46
RBFOX1-212ENST00000550418 MKRN1Q9UHC7 482 aaKnown RBP17.95■□□□□ 0.46
RBFOX1-212ENST00000550418 A0A1B0GUA9 196 aa17.94■□□□□ 0.46
RBFOX1-212ENST00000550418 TTF1Q15361 905 aaPredicted RBP17.94■□□□□ 0.46
RBFOX1-212ENST00000550418 CCDC129Q6ZRS4 1044 aa17.94■□□□□ 0.46
RBFOX1-212ENST00000550418 POTEDQ86YR6 584 aa17.94■□□□□ 0.46
RBFOX1-212ENST00000550418 FBF1Q8TES7 1133 aa17.94■□□□□ 0.46
RBFOX1-212ENST00000550418 UBA5Q9GZZ9 404 aa17.94■□□□□ 0.46
RBFOX1-212ENST00000550418 PA2G4Q9UQ80 394 aaKnown RBP17.94■□□□□ 0.46
RBFOX1-212ENST00000550418 CTNNBL1Q8WYA6 563 aaPredicted RBP17.94■□□□□ 0.46
RBFOX1-212ENST00000550418 CHPF2Q9P2E5 772 aa17.94■□□□□ 0.46
RBFOX1-212ENST00000550418 LUC7L2Q9Y383 392 aaKnown RBP17.94■□□□□ 0.46
RBFOX1-212ENST00000550418 MSH6P52701 1360 aa17.94■□□□□ 0.46
RBFOX1-212ENST00000550418 SGSM2O43147 1006 aa17.94■□□□□ 0.46
RBFOX1-212ENST00000550418 PRC1O43663 620 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms