RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, human

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5B-208	ENST00000550283	TAF1D	Q9H5J8	278 aa	Predicted RBP	14.06	□□□□□ -0.16
RAB5B-208	ENST00000550283	CNNM1	Q9NRU3	951 aa		14.06	□□□□□ -0.16
RAB5B-208	ENST00000550283	MED23	Q9ULK4	1368 aa		14.06	□□□□□ -0.16
RAB5B-208	ENST00000550283	VEGFA	P15692	232 aa	Predicted RBP	14.05	□□□□□ -0.16
RAB5B-208	ENST00000550283	CIAPIN1	Q6FI81	312 aa		14.05	□□□□□ -0.16
RAB5B-208	ENST00000550283	EYA3	Q99504	573 aa		14.05	□□□□□ -0.16
RAB5B-208	ENST00000550283	LEMD3	Q9Y2U8	911 aa		14.05	□□□□□ -0.16
RAB5B-208	ENST00000550283	COG6	Q9Y2V7	657 aa		14.05	□□□□□ -0.16
RAB5B-208	ENST00000550283	ADAMTSL1	Q8N6G6	1762 aa		14.04	□□□□□ -0.16
RAB5B-208	ENST00000550283	GNAI3	P08754	354 aa		14.04	□□□□□ -0.16
RAB5B-208	ENST00000550283	FTSJ3	Q8IY81	847 aa	Known RBP	14.04	□□□□□ -0.16
RAB5B-208	ENST00000550283	ANKRD2	Q9GZV1	360 aa		14.04	□□□□□ -0.16
RAB5B-208	ENST00000550283	EYA2	O00167	538 aa		14.03	□□□□□ -0.16
RAB5B-208	ENST00000550283	TOMM70	O94826	608 aa		14.03	□□□□□ -0.16
RAB5B-208	ENST00000550283	GNAI2	P04899	355 aa		14.03	□□□□□ -0.16
RAB5B-208	ENST00000550283	GYG1	P46976	350 aa		14.03	□□□□□ -0.16
RAB5B-208	ENST00000550283	HIRA	P54198	1017 aa	Predicted RBP	14.03	□□□□□ -0.16
RAB5B-208	ENST00000550283	MTX1	Q13505	466 aa		14.03	□□□□□ -0.16
RAB5B-208	ENST00000550283	DNAJC5G	Q8N7S2	189 aa		14.03	□□□□□ -0.16
RAB5B-208	ENST00000550283	TRPM4	Q8TD43	1214 aa		14.03	□□□□□ -0.16
RAB5B-208	ENST00000550283	GPRC5D	Q9NZD1	345 aa		14.03	□□□□□ -0.16
RAB5B-208	ENST00000550283	JAG2	Q9Y219	1238 aa		14.03	□□□□□ -0.16
RAB5B-208	ENST00000550283	SRGAP3	O43295	1099 aa		14.02	□□□□□ -0.17
RAB5B-208	ENST00000550283	VIL1	P09327	827 aa	Known RBP	14.02	□□□□□ -0.17
RAB5B-208	ENST00000550283	FGFR2	P21802	821 aa		14.02	□□□□□ -0.17
RAB5B-208	ENST00000550283	EPHX2	P34913	555 aa		14.02	□□□□□ -0.17
RAB5B-208	ENST00000550283	FMR1	Q06787	632 aa	Known RBP eCLIP	14.02	□□□□□ -0.17
RAB5B-208	ENST00000550283	METTL24	Q5JXM2	366 aa		14.02	□□□□□ -0.17
RAB5B-208	ENST00000550283	C15orf52	Q6ZUT6	534 aa	Known RBP	14.02	□□□□□ -0.17
RAB5B-208	ENST00000550283	GML	Q99445	158 aa		14.02	□□□□□ -0.17
RAB5B-208	ENST00000550283	HACL1	Q9UJ83	578 aa		14.02	□□□□□ -0.17
RAB5B-208	ENST00000550283	SCN4A	P35499	1836 aa		14.01	□□□□□ -0.17
RAB5B-208	ENST00000550283	ASTN2	O75129	1339 aa	Predicted RBP	14.01	□□□□□ -0.17
RAB5B-208	ENST00000550283	PDE8B	O95263	885 aa		14.01	□□□□□ -0.17
RAB5B-208	ENST00000550283	KCNJ4	P48050	445 aa		14.01	□□□□□ -0.17
RAB5B-208	ENST00000550283	HTRA3	P83110	453 aa		14.01	□□□□□ -0.17
RAB5B-208	ENST00000550283	MVP	Q14764	893 aa	Known RBP	14.01	□□□□□ -0.17
RAB5B-208	ENST00000550283	DACT2	Q5SW24	774 aa		14.01	□□□□□ -0.17
RAB5B-208	ENST00000550283	DLK2	Q6UY11	383 aa		14.01	□□□□□ -0.17
RAB5B-208	ENST00000550283	CERS5	Q8N5B7	392 aa		14.01	□□□□□ -0.17
RAB5B-208	ENST00000550283	FAM84B	Q96KN1	310 aa	Predicted RBP	14.01	□□□□□ -0.17
RAB5B-208	ENST00000550283	CD209	Q9NNX6	404 aa		14.01	□□□□□ -0.17
RAB5B-208	ENST00000550283	COPRS	Q9NQ92	184 aa		14.01	□□□□□ -0.17
RAB5B-208	ENST00000550283	PSME4	Q14997	1843 aa		14.01	□□□□□ -0.17
RAB5B-208	ENST00000550283	MROH5	Q6ZUA9	1318 aa		14	□□□□□ -0.17
RAB5B-208	ENST00000550283	POLA2	Q14181	598 aa		14	□□□□□ -0.17
RAB5B-208	ENST00000550283	GRIK5	Q16478	980 aa		14	□□□□□ -0.17
RAB5B-208	ENST00000550283	EAPP	Q56P03	285 aa	Predicted RBP	14	□□□□□ -0.17
RAB5B-208	ENST00000550283	SAMD7	Q7Z3H4	446 aa		14	□□□□□ -0.17
RAB5B-208	ENST00000550283	SIRT2	Q8IXJ6	389 aa		14	□□□□□ -0.17
RAB5B-208	ENST00000550283	MICALL2	Q8IY33	904 aa		14	□□□□□ -0.17
RAB5B-208	ENST00000550283	RBM46	Q8TBY0	533 aa	Known RBP	14	□□□□□ -0.17
RAB5B-208	ENST00000550283	COA1	Q9GZY4	146 aa		14	□□□□□ -0.17
RAB5B-208	ENST00000550283	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	14	□□□□□ -0.17
RAB5B-208	ENST00000550283	ADORA1	P30542	326 aa		13.99	□□□□□ -0.17
RAB5B-208	ENST00000550283	UBE4A	Q14139	1066 aa		13.99	□□□□□ -0.17
RAB5B-208	ENST00000550283	TNIP1	Q15025	636 aa		13.99	□□□□□ -0.17
RAB5B-208	ENST00000550283	MAP1S	Q66K74	1059 aa	Predicted RBP	13.99	□□□□□ -0.17
RAB5B-208	ENST00000550283	CEP85	Q6P2H3	762 aa		13.99	□□□□□ -0.17
RAB5B-208	ENST00000550283	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.99	□□□□□ -0.17
RAB5B-208	ENST00000550283	ZBTB40	Q9NUA8	1239 aa		13.99	□□□□□ -0.17
RAB5B-208	ENST00000550283	CNOT7	Q9UIV1	285 aa	Known RBP	13.99	□□□□□ -0.17
RAB5B-208	ENST00000550283	PCDHAC2	Q9Y5I4	1007 aa		13.99	□□□□□ -0.17
RAB5B-208	ENST00000550283	COL1A1	P02452	1464 aa	Predicted RBP	13.99	□□□□□ -0.17
RAB5B-208	ENST00000550283	AOX1	Q06278	1338 aa		13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	USP17L3	A6NCW0	530 aa		13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	USP17L4	A6NCW7	530 aa		13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	CIAO1	O76071	339 aa		13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	SASH1	O94885	1247 aa		13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	IL1R1	P14778	569 aa		13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	BCAM	P50895	628 aa		13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	APLP1	P51693	650 aa		13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	GTF2I	P78347	998 aa		13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	ATP8B2	P98198	1209 aa		13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	TFCP2	Q12800	502 aa		13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	USP17L1	Q7RTZ2	530 aa		13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	PODN	Q7Z5L7	613 aa		13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	FBXO33	Q7Z6M2	555 aa		13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	SSH3	Q8TE77	659 aa		13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	FBXW7	Q969H0	707 aa		13.98	□□□□□ -0.17
RAB5B-208	ENST00000550283	IQCA1L	A6NCM1	817 aa		13.97	□□□□□ -0.17
RAB5B-208	ENST00000550283		G3V3G9	751 aa		13.97	□□□□□ -0.17
RAB5B-208	ENST00000550283	ITGBL1	O95965	494 aa	Predicted RBP	13.97	□□□□□ -0.17
RAB5B-208	ENST00000550283	RRP1	P56182	461 aa	Known RBP	13.97	□□□□□ -0.17
RAB5B-208	ENST00000550283	DCAF8	Q5TAQ9	597 aa		13.97	□□□□□ -0.17
RAB5B-208	ENST00000550283	TDRD7	Q8NHU6	1098 aa	Known RBP	13.97	□□□□□ -0.17
RAB5B-208	ENST00000550283	TIMM10	P62072	90 aa		13.96	□□□□□ -0.17
RAB5B-208	ENST00000550283	RBM26	Q5T8P6	1007 aa	Known RBP	13.96	□□□□□ -0.17
RAB5B-208	ENST00000550283	CHADL	Q6NUI6	762 aa		13.96	□□□□□ -0.17
RAB5B-208	ENST00000550283	LDHD	Q86WU2	507 aa		13.96	□□□□□ -0.17
RAB5B-208	ENST00000550283	DPF2	Q92785	391 aa		13.96	□□□□□ -0.17
RAB5B-208	ENST00000550283	ADARB2	Q9NS39	739 aa	Known RBP	13.96	□□□□□ -0.17
RAB5B-208	ENST00000550283	SCAF8	Q9UPN6	1271 aa	Known RBP	13.96	□□□□□ -0.17
RAB5B-208	ENST00000550283	ZNF609	O15014	1411 aa		13.96	□□□□□ -0.18
RAB5B-208	ENST00000550283	TRAF5	O00463	557 aa		13.95	□□□□□ -0.18
RAB5B-208	ENST00000550283	ZBTB22	O15209	634 aa		13.95	□□□□□ -0.18
RAB5B-208	ENST00000550283	LMOD1	P29536	600 aa	Predicted RBP	13.95	□□□□□ -0.18
RAB5B-208	ENST00000550283	HIBADH	P31937	336 aa	Known RBP	13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 344.7 ms