RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 DDX46Q7L014 1031 aaKnown RBP12.08□□□□□ -0.48
ERBB3-214ENST00000550070 LRP10Q7Z4F1 713 aa12.08□□□□□ -0.48
ERBB3-214ENST00000550070 NSUN7Q8NE18 718 aaKnown RBP12.08□□□□□ -0.48
ERBB3-214ENST00000550070 GOLPH3LQ9H4A5 285 aa12.08□□□□□ -0.48
ERBB3-214ENST00000550070 RGPD5Q99666 1765 aa12.08□□□□□ -0.48
ERBB3-214ENST00000550070 ZNF335Q9H4Z2 1342 aaPredicted RBP12.08□□□□□ -0.48
ERBB3-214ENST00000550070 SLIT3O75094 1523 aa12.07□□□□□ -0.48
ERBB3-214ENST00000550070 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.07□□□□□ -0.48
ERBB3-214ENST00000550070 SMTNL1A8MU46 457 aa12.07□□□□□ -0.48
ERBB3-214ENST00000550070 PFKFB2O60825 505 aa12.07□□□□□ -0.48
ERBB3-214ENST00000550070 CDC25BP30305 580 aa12.07□□□□□ -0.48
ERBB3-214ENST00000550070 CCAR1Q8IX12 1150 aaKnown RBP12.07□□□□□ -0.48
ERBB3-214ENST00000550070 NFATC2IPQ8NCF5 419 aa12.07□□□□□ -0.48
ERBB3-214ENST00000550070 HAUS7Q99871 368 aa12.07□□□□□ -0.48
ERBB3-214ENST00000550070 SLC52A2Q9HAB3 445 aa12.07□□□□□ -0.48
ERBB3-214ENST00000550070 RCOR1Q9UKL0 485 aa12.07□□□□□ -0.48
ERBB3-214ENST00000550070 A0A087WWV3 80 aa12.07□□□□□ -0.48
ERBB3-214ENST00000550070 ARID5BQ14865 1188 aa12.07□□□□□ -0.48
ERBB3-214ENST00000550070 UBE3BQ7Z3V4 1068 aa12.07□□□□□ -0.48
ERBB3-214ENST00000550070 USP16Q9Y5T5 823 aa12.07□□□□□ -0.48
ERBB3-214ENST00000550070 ZNF142P52746 1687 aaPredicted RBP12.07□□□□□ -0.48
ERBB3-214ENST00000550070 CAVIN2O95810 425 aa12.06□□□□□ -0.48
ERBB3-214ENST00000550070 APOBRQ0VD83 1088 aa12.06□□□□□ -0.48
ERBB3-214ENST00000550070 SNW1Q13573 536 aaKnown RBP12.06□□□□□ -0.48
ERBB3-214ENST00000550070 RABL6Q3YEC7 729 aaPredicted RBP12.06□□□□□ -0.48
ERBB3-214ENST00000550070 SARM1Q6SZW1 724 aa12.06□□□□□ -0.48
ERBB3-214ENST00000550070 LRRC8AQ8IWT6 810 aa12.06□□□□□ -0.48
ERBB3-214ENST00000550070 ZNF496Q96IT1 587 aaPredicted RBP12.06□□□□□ -0.48
ERBB3-214ENST00000550070 LLPHQ9BRT6 129 aaKnown RBP12.06□□□□□ -0.48
ERBB3-214ENST00000550070 RFX7Q2KHR2 1363 aa12.06□□□□□ -0.48
ERBB3-214ENST00000550070 AFDNP55196 1824 aaKnown RBP12.06□□□□□ -0.48
ERBB3-214ENST00000550070 NAA30Q147X3 362 aaPredicted RBP12.06□□□□□ -0.48
ERBB3-214ENST00000550070 TPD52L1Q16890 204 aaPredicted RBP12.06□□□□□ -0.48
ERBB3-214ENST00000550070 UTP14CQ5TAP6 766 aaKnown RBP12.06□□□□□ -0.48
ERBB3-214ENST00000550070 TMTC2Q8N394 836 aa12.06□□□□□ -0.48
ERBB3-214ENST00000550070 USP28Q96RU2 1077 aa12.06□□□□□ -0.48
ERBB3-214ENST00000550070 KDM6AO15550 1401 aaPredicted RBP12.06□□□□□ -0.48
ERBB3-214ENST00000550070 A0A0G2JLW4 131 aa12.05□□□□□ -0.48
ERBB3-214ENST00000550070 PTPDC1A2A3K4 754 aa12.05□□□□□ -0.48
ERBB3-214ENST00000550070 ATP5J2-PTCD1G3V325 749 aa12.05□□□□□ -0.48
ERBB3-214ENST00000550070 GOLGA6L19H0YKK7 550 aa12.05□□□□□ -0.48
ERBB3-214ENST00000550070 PTCD1O75127 700 aaKnown RBP12.05□□□□□ -0.48
ERBB3-214ENST00000550070 PPFIA3O75145 1194 aa12.05□□□□□ -0.48
ERBB3-214ENST00000550070 CCT2P78371 535 aaKnown RBP12.05□□□□□ -0.48
ERBB3-214ENST00000550070 NAA16Q6N069 864 aaPredicted RBP12.05□□□□□ -0.48
ERBB3-214ENST00000550070 DHX32Q7L7V1 743 aaKnown RBP12.05□□□□□ -0.48
ERBB3-214ENST00000550070 ZHX1Q9UKY1 873 aaPredicted RBP12.05□□□□□ -0.48
ERBB3-214ENST00000550070 SCN11AQ9UI33 1791 aa12.05□□□□□ -0.48
ERBB3-214ENST00000550070 EXOSC10Q01780 885 aaKnown RBP12.05□□□□□ -0.48
ERBB3-214ENST00000550070 STX1AQ16623 288 aa12.05□□□□□ -0.48
ERBB3-214ENST00000550070 KBTBD3Q8NAB2 608 aa12.05□□□□□ -0.48
ERBB3-214ENST00000550070 ENGASEQ8NFI3 743 aa12.05□□□□□ -0.48
ERBB3-214ENST00000550070 USP27XA6NNY8 438 aa12.04□□□□□ -0.48
ERBB3-214ENST00000550070 CTAGE5O15320 804 aa12.04□□□□□ -0.48
ERBB3-214ENST00000550070 MRFAP1L1Q96HT8 127 aa12.04□□□□□ -0.48
ERBB3-214ENST00000550070 NCOA5Q9HCD5 579 aaKnown RBP12.04□□□□□ -0.48
ERBB3-214ENST00000550070 PAXBP1Q9Y5B6 917 aa12.04□□□□□ -0.48
ERBB3-214ENST00000550070 SH3TC1Q8TE82 1336 aa12.04□□□□□ -0.48
ERBB3-214ENST00000550070 A0A087WZG4 1122 aa12.04□□□□□ -0.48
ERBB3-214ENST00000550070 VGLL3A8MV65 326 aa12.04□□□□□ -0.48
ERBB3-214ENST00000550070 SYCP1Q15431 976 aa12.04□□□□□ -0.48
ERBB3-214ENST00000550070 ILDR1Q86SU0 546 aaPredicted RBP12.04□□□□□ -0.48
ERBB3-214ENST00000550070 DHX40Q8IX18 779 aaKnown RBP12.04□□□□□ -0.48
ERBB3-214ENST00000550070 ERCC4Q92889 916 aaPredicted RBP12.04□□□□□ -0.48
ERBB3-214ENST00000550070 ERBB3P21860 1342 aa12.03□□□□□ -0.48
ERBB3-214ENST00000550070 CASP7P55210 303 aa12.03□□□□□ -0.48
ERBB3-214ENST00000550070 RBM6P78332 1123 aaKnown RBP12.03□□□□□ -0.48
ERBB3-214ENST00000550070 GUCY1B3Q02153 619 aa12.03□□□□□ -0.48
ERBB3-214ENST00000550070 AGXT2Q9BYV1 514 aa12.03□□□□□ -0.48
ERBB3-214ENST00000550070 SALL1Q9NSC2 1324 aa12.03□□□□□ -0.48
ERBB3-214ENST00000550070 GOLIM4O00461 696 aa12.03□□□□□ -0.48
ERBB3-214ENST00000550070 PHKG2P15735 406 aa12.03□□□□□ -0.48
ERBB3-214ENST00000550070 PSEN1P49768 467 aa12.03□□□□□ -0.48
ERBB3-214ENST00000550070 CCDC112Q8NEF3 446 aa12.03□□□□□ -0.48
ERBB3-214ENST00000550070 ZC3H6P61129 1189 aaKnown RBP12.02□□□□□ -0.48
ERBB3-214ENST00000550070 CEP135Q66GS9 1140 aa12.02□□□□□ -0.48
ERBB3-214ENST00000550070 LMBR1LQ6UX01 489 aa12.02□□□□□ -0.48
ERBB3-214ENST00000550070 CCDC73Q6ZRK6 1079 aa12.02□□□□□ -0.48
ERBB3-214ENST00000550070 CHST3Q7LGC8 479 aa12.02□□□□□ -0.48
ERBB3-214ENST00000550070 RAPGEF4Q8WZA2 1011 aa12.02□□□□□ -0.48
ERBB3-214ENST00000550070 PALLDQ8WX93 1383 aa12.02□□□□□ -0.48
ERBB3-214ENST00000550070 ARFGEF2Q9Y6D5 1785 aa12.02□□□□□ -0.48
ERBB3-214ENST00000550070 BECN2A8MW95 431 aa12.02□□□□□ -0.49
ERBB3-214ENST00000550070 E7EWF7 191 aa12.02□□□□□ -0.49
ERBB3-214ENST00000550070 SNRPA1P09661 255 aaKnown RBP12.02□□□□□ -0.49
ERBB3-214ENST00000550070 TIMM10P62072 90 aa12.02□□□□□ -0.49
ERBB3-214ENST00000550070 FAM160A1Q05DH4 1040 aa12.02□□□□□ -0.49
ERBB3-214ENST00000550070 FSIP1Q8NA03 581 aa12.02□□□□□ -0.49
ERBB3-214ENST00000550070 NEUROD6Q96NK8 337 aa12.02□□□□□ -0.49
ERBB3-214ENST00000550070 DSCC1Q9BVC3 393 aa12.02□□□□□ -0.49
ERBB3-214ENST00000550070 HELLSQ9NRZ9 838 aa12.02□□□□□ -0.49
ERBB3-214ENST00000550070 PAG1Q9NWQ8 432 aa12.02□□□□□ -0.49
ERBB3-214ENST00000550070 KINO60870 393 aaKnown RBP12.02□□□□□ -0.49
ERBB3-214ENST00000550070 SKILP12757 684 aa12.02□□□□□ -0.49
ERBB3-214ENST00000550070 PDIA3P30101 505 aaKnown RBP12.02□□□□□ -0.49
ERBB3-214ENST00000550070 ATG9AQ7Z3C6 839 aa12.02□□□□□ -0.49
ERBB3-214ENST00000550070 FILIP1Q7Z7B0 1213 aa12.02□□□□□ -0.49
ERBB3-214ENST00000550070 ZNF396Q96N95 335 aaPredicted RBP12.02□□□□□ -0.49
ERBB3-214ENST00000550070 GTPBP4Q9BZE4 634 aaKnown RBP12.02□□□□□ -0.49
ERBB3-214ENST00000550070 CTNNA3Q9UI47 895 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms