RNA–Protein interactions for RNA: ENST00000549913.6

RPH3A-217, Transcript of rabphilin 3A, humanhuman

TSL 1 (best)

Gene RPH3A, Length 5,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-217ENST00000549913 HSP90AA4PQ58FG1 418 aa12.88□□□□□ -0.35
RPH3A-217ENST00000549913 IFIT1BQ5T764 474 aaKnown RBP12.88□□□□□ -0.35
RPH3A-217ENST00000549913 RMND1Q9NWS8 449 aa12.88□□□□□ -0.35
RPH3A-217ENST00000549913 IL2RBP14784 551 aa12.88□□□□□ -0.35
RPH3A-217ENST00000549913 CPA1P15085 419 aa12.88□□□□□ -0.35
RPH3A-217ENST00000549913 CCDC178Q5BJE1 867 aa12.88□□□□□ -0.35
RPH3A-217ENST00000549913 PTPDC1A2A3K4 754 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 POTEJP0CG39 1038 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 CETN2P41208 172 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 JADE2Q9NQC1 790 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 GCC2Q8IWJ2 1684 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 SPAG1Q07617 926 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 APOBRQ0VD83 1088 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 IQSEC3Q9UPP2 1182 aaPredicted RBP12.87□□□□□ -0.35
RPH3A-217ENST00000549913 CTAGE15A4D2H0 777 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 CTAGE8P0CG41 777 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 AFMP43652 599 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 GSTO1P78417 241 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 CCDC40Q4G0X9 1142 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 ATL3Q6DD88 541 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 MICALCLQ6ZW33 695 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 CTAGE6Q86UF2 777 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 CTAGE4Q8IX94 777 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 CABLES1Q8TDN4 633 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 MATR3P43243 847 aaKnown RBP eCLIP12.87□□□□□ -0.35
RPH3A-217ENST00000549913 GNAQP50148 359 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 RRAGBQ5VZM2 374 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 NAA16Q6N069 864 aaPredicted RBP12.87□□□□□ -0.35
RPH3A-217ENST00000549913 PLCD4Q9BRC7 762 aa12.87□□□□□ -0.35
RPH3A-217ENST00000549913 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.87□□□□□ -0.35
RPH3A-217ENST00000549913 AOX1Q06278 1338 aa12.86□□□□□ -0.35
RPH3A-217ENST00000549913 IFFO1Q0D2I5 559 aa12.86□□□□□ -0.35
RPH3A-217ENST00000549913 TRIM47Q96LD4 638 aa12.86□□□□□ -0.35
RPH3A-217ENST00000549913 FEZ1Q99689 392 aa12.86□□□□□ -0.35
RPH3A-217ENST00000549913 LRRC27Q9C0I9 530 aa12.86□□□□□ -0.35
RPH3A-217ENST00000549913 IFNKQ9P0W0 207 aa12.86□□□□□ -0.35
RPH3A-217ENST00000549913 SNX14Q9Y5W7 946 aa12.86□□□□□ -0.35
RPH3A-217ENST00000549913 HLA-DOAP06340 250 aa12.86□□□□□ -0.35
RPH3A-217ENST00000549913 TERF1P54274 439 aa12.86□□□□□ -0.35
RPH3A-217ENST00000549913 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.86□□□□□ -0.35
RPH3A-217ENST00000549913 NLRP3Q96P20 1036 aa12.86□□□□□ -0.35
RPH3A-217ENST00000549913 PBRM1Q86U86 1689 aa12.86□□□□□ -0.35
RPH3A-217ENST00000549913 CCDC175P0C221 793 aa12.85□□□□□ -0.35
RPH3A-217ENST00000549913 GNAT2P19087 354 aa12.85□□□□□ -0.35
RPH3A-217ENST00000549913 RFC4P35249 363 aa12.85□□□□□ -0.35
RPH3A-217ENST00000549913 ZRSR2Q15696 482 aaKnown RBP12.85□□□□□ -0.35
RPH3A-217ENST00000549913 BRAPQ7Z569 592 aa12.85□□□□□ -0.35
RPH3A-217ENST00000549913 TRIM75PA6NK02 468 aa12.85□□□□□ -0.35
RPH3A-217ENST00000549913 LIG1P18858 919 aa12.85□□□□□ -0.35
RPH3A-217ENST00000549913 ATP6V1AP38606 617 aa12.85□□□□□ -0.35
RPH3A-217ENST00000549913 SSR1P43307 286 aaKnown RBP12.85□□□□□ -0.35
RPH3A-217ENST00000549913 DYDC1Q8WWB3 177 aa12.85□□□□□ -0.35
RPH3A-217ENST00000549913 EHMT1Q9H9B1 1298 aa12.85□□□□□ -0.35
RPH3A-217ENST00000549913 NIP7Q9Y221 180 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPH3A-217ENST00000549913 TRIM21P19474 475 aaKnown RBP12.85□□□□□ -0.35
RPH3A-217ENST00000549913 CKAP4Q07065 602 aaKnown RBP12.85□□□□□ -0.35
RPH3A-217ENST00000549913 HLTFQ14527 1009 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPH3A-217ENST00000549913 CHST3Q7LGC8 479 aa12.85□□□□□ -0.35
RPH3A-217ENST00000549913 MAGI3Q5TCQ9 1506 aa12.85□□□□□ -0.35
RPH3A-217ENST00000549913 ANKRD62A6NC57 917 aa12.85□□□□□ -0.35
RPH3A-217ENST00000549913 SGSM2O43147 1006 aa12.85□□□□□ -0.35
RPH3A-217ENST00000549913 DZIP3Q86Y13 1208 aaKnown RBP12.85□□□□□ -0.35
RPH3A-217ENST00000549913 OGFRQ9NZT2 677 aa12.85□□□□□ -0.35
RPH3A-217ENST00000549913 CEP112Q8N8E3 955 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 UTP14AQ9BVJ6 771 aaKnown RBP12.84□□□□□ -0.35
RPH3A-217ENST00000549913 IRS4O14654 1257 aaPredicted RBP12.84□□□□□ -0.35
RPH3A-217ENST00000549913 TSPY3P0CV98 308 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 TSPY8P0CW00 308 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 DESP17661 470 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 RPS6KB1P23443 525 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 MCM6Q14566 821 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 SLC4A8Q2Y0W8 1093 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 RNF187Q5TA31 235 aaPredicted RBP12.84□□□□□ -0.35
RPH3A-217ENST00000549913 TCERG1LQ5VWI1 586 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 ZNF790Q6PG37 636 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 SYT10Q6XYQ8 523 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 CCDC113Q9H0I3 377 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 AKR1B10O60218 316 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 CYLC1P35663 651 aaPredicted RBP12.84□□□□□ -0.35
RPH3A-217ENST00000549913 FAM160A1Q05DH4 1040 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 CETN1Q12798 172 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 SIRT1Q96EB6 747 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 EXOC1Q9NV70 894 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 GBP2P32456 591 aaPredicted RBP12.84□□□□□ -0.35
RPH3A-217ENST00000549913 MAP2K1Q02750 393 aaPredicted RBP12.84□□□□□ -0.35
RPH3A-217ENST00000549913 GOLGA1Q92805 767 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 SETDB2Q96T68 719 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 BCCIPQ9P287 314 aaKnown RBP eCLIP12.84□□□□□ -0.35
RPH3A-217ENST00000549913 FBXO3Q9UK99 471 aa12.84□□□□□ -0.35
RPH3A-217ENST00000549913 HELLSQ9NRZ9 838 aa12.83□□□□□ -0.35
RPH3A-217ENST00000549913 SBNO2Q9Y2G9 1366 aa12.83□□□□□ -0.36
RPH3A-217ENST00000549913 STAT6P42226 847 aa12.83□□□□□ -0.36
RPH3A-217ENST00000549913 GIMAP7Q8NHV1 300 aa12.83□□□□□ -0.36
RPH3A-217ENST00000549913 CALM1P0DP23 149 aa12.83□□□□□ -0.36
RPH3A-217ENST00000549913 CALM2P0DP24 149 aa12.83□□□□□ -0.36
RPH3A-217ENST00000549913 CALM3P0DP25 149 aa12.83□□□□□ -0.36
RPH3A-217ENST00000549913 SPECC1Q5M775 1068 aa12.83□□□□□ -0.36
RPH3A-217ENST00000549913 DHX37Q8IY37 1157 aaKnown RBP12.83□□□□□ -0.36
RPH3A-217ENST00000549913 TRMT2AQ8IZ69 625 aaKnown RBP12.83□□□□□ -0.36
RPH3A-217ENST00000549913 CABP5Q9NP86 173 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms