RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 TRIM27P14373 513 aa12.32□□□□□ -0.44
HDAC7-229ENST00000549883 TBC1D10BQ4KMP7 808 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-229ENST00000549883 LRRC24Q50LG9 513 aa12.32□□□□□ -0.44
HDAC7-229ENST00000549883 TAF7LQ5H9L4 462 aa12.32□□□□□ -0.44
HDAC7-229ENST00000549883 DPF2Q92785 391 aa12.32□□□□□ -0.44
HDAC7-229ENST00000549883 FRAT1Q92837 279 aaPredicted RBP12.32□□□□□ -0.44
HDAC7-229ENST00000549883 GMLQ99445 158 aa12.32□□□□□ -0.44
HDAC7-229ENST00000549883 MEIS3Q99687 375 aa12.32□□□□□ -0.44
HDAC7-229ENST00000549883 API5Q9BZZ5 524 aaKnown RBP12.32□□□□□ -0.44
HDAC7-229ENST00000549883 CNNM1Q9NRU3 951 aa12.32□□□□□ -0.44
HDAC7-229ENST00000549883 ZBED9Q6R2W3 1325 aa12.32□□□□□ -0.44
HDAC7-229ENST00000549883 KCNJ4P48050 445 aa12.31□□□□□ -0.44
HDAC7-229ENST00000549883 RFX5P48382 616 aaPredicted RBP12.31□□□□□ -0.44
HDAC7-229ENST00000549883 RSBN1LQ6PCB5 846 aaPredicted RBP12.31□□□□□ -0.44
HDAC7-229ENST00000549883 CLUAP1Q96AJ1 413 aa12.31□□□□□ -0.44
HDAC7-229ENST00000549883 KLRG1Q96E93 195 aa12.31□□□□□ -0.44
HDAC7-229ENST00000549883 GLIS2Q9BZE0 524 aaPredicted RBP12.31□□□□□ -0.44
HDAC7-229ENST00000549883 RIPOR2Q9Y4F9 1068 aa12.31□□□□□ -0.44
HDAC7-229ENST00000549883 USP17L3A6NCW0 530 aa12.3□□□□□ -0.44
HDAC7-229ENST00000549883 USP17L4A6NCW7 530 aa12.3□□□□□ -0.44
HDAC7-229ENST00000549883 H7C1D1 291 aa12.3□□□□□ -0.44
HDAC7-229ENST00000549883 DACT2Q5SW24 774 aa12.3□□□□□ -0.44
HDAC7-229ENST00000549883 INTS3Q68E01 1043 aaKnown RBP12.3□□□□□ -0.44
HDAC7-229ENST00000549883 USP17L1Q7RTZ2 530 aa12.3□□□□□ -0.44
HDAC7-229ENST00000549883 PODNQ7Z5L7 613 aa12.3□□□□□ -0.44
HDAC7-229ENST00000549883 FBXW7Q969H0 707 aa12.3□□□□□ -0.44
HDAC7-229ENST00000549883 COA1Q9GZY4 146 aa12.3□□□□□ -0.44
HDAC7-229ENST00000549883 PGAP2Q9UHJ9 254 aa12.3□□□□□ -0.44
HDAC7-229ENST00000549883 JAG2Q9Y219 1238 aa12.3□□□□□ -0.44
HDAC7-229ENST00000549883 LRRFIP2Q9Y608 721 aaKnown RBP12.3□□□□□ -0.44
HDAC7-229ENST00000549883 KIF16BQ96L93 1317 aa12.3□□□□□ -0.44
HDAC7-229ENST00000549883 UBTFL1P0CB47 393 aaPredicted RBP12.29□□□□□ -0.44
HDAC7-229ENST00000549883 RPS12P25398 132 aaKnown RBP12.29□□□□□ -0.44
HDAC7-229ENST00000549883 CST9Q5W186 159 aa12.29□□□□□ -0.44
HDAC7-229ENST00000549883 ATF7IPQ6VMQ6 1270 aa12.29□□□□□ -0.44
HDAC7-229ENST00000549883 ARHGAP45Q92619 1136 aa12.29□□□□□ -0.44
HDAC7-229ENST00000549883 CD209Q9NNX6 404 aa12.29□□□□□ -0.44
HDAC7-229ENST00000549883 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
HDAC7-229ENST00000549883 MKRN1Q9UHC7 482 aaKnown RBP12.29□□□□□ -0.44
HDAC7-229ENST00000549883 ZNF609O15014 1411 aa12.28□□□□□ -0.44
HDAC7-229ENST00000549883 RLBP1P12271 317 aa12.28□□□□□ -0.44
HDAC7-229ENST00000549883 GYG1P46976 350 aa12.28□□□□□ -0.44
HDAC7-229ENST00000549883 ZNF280AP59817 542 aaPredicted RBP12.28□□□□□ -0.44
HDAC7-229ENST00000549883 GTF2IP78347 998 aa12.28□□□□□ -0.44
HDAC7-229ENST00000549883 KIF4BQ2VIQ3 1234 aa12.28□□□□□ -0.44
HDAC7-229ENST00000549883 C15orf52Q6ZUT6 534 aaKnown RBP12.28□□□□□ -0.44
HDAC7-229ENST00000549883 USP48Q86UV5 1035 aa12.28□□□□□ -0.44
HDAC7-229ENST00000549883 CERS5Q8N5B7 392 aa12.28□□□□□ -0.44
HDAC7-229ENST00000549883 VGLL2Q8N8G2 317 aa12.28□□□□□ -0.44
HDAC7-229ENST00000549883 AGBL3Q8NEM8 1001 aa12.28□□□□□ -0.44
HDAC7-229ENST00000549883 SCAF8Q9UPN6 1271 aaKnown RBP12.28□□□□□ -0.44
HDAC7-229ENST00000549883 TMEM88BA6NKF7 163 aa12.27□□□□□ -0.45
HDAC7-229ENST00000549883 ADM5C9JUS6 153 aa12.27□□□□□ -0.45
HDAC7-229ENST00000549883 PTPN12Q05209 780 aaKnown RBP12.27□□□□□ -0.45
HDAC7-229ENST00000549883 STRIP1Q5VSL9 837 aa12.27□□□□□ -0.45
HDAC7-229ENST00000549883 TTLL5Q6EMB2 1281 aa12.27□□□□□ -0.45
HDAC7-229ENST00000549883 TMEM57Q8N5G2 664 aa12.27□□□□□ -0.45
HDAC7-229ENST00000549883 PA2G4Q9UQ80 394 aaKnown RBP12.27□□□□□ -0.45
HDAC7-229ENST00000549883 PCDHAC2Q9Y5I4 1007 aa12.27□□□□□ -0.45
HDAC7-229ENST00000549883 USP17L8P0C7I0 530 aa12.26□□□□□ -0.45
HDAC7-229ENST00000549883 SCARF1Q14162 830 aa12.26□□□□□ -0.45
HDAC7-229ENST00000549883 METTL24Q5JXM2 366 aa12.26□□□□□ -0.45
HDAC7-229ENST00000549883 ATG9AQ7Z3C6 839 aa12.26□□□□□ -0.45
HDAC7-229ENST00000549883 ZC3H15Q8WU90 426 aaKnown RBP12.26□□□□□ -0.45
HDAC7-229ENST00000549883 FAM84BQ96KN1 310 aaPredicted RBP12.26□□□□□ -0.45
HDAC7-229ENST00000549883 SIL1Q9H173 461 aa12.26□□□□□ -0.45
HDAC7-229ENST00000549883 EYA2O00167 538 aa12.25□□□□□ -0.45
HDAC7-229ENST00000549883 IPO8O15397 1037 aaKnown RBP12.25□□□□□ -0.45
HDAC7-229ENST00000549883 IL1R1P14778 569 aa12.25□□□□□ -0.45
HDAC7-229ENST00000549883 UBE4AQ14139 1066 aa12.25□□□□□ -0.45
HDAC7-229ENST00000549883 NBPF9Q3BBW0 867 aa12.25□□□□□ -0.45
HDAC7-229ENST00000549883 ZKSCAN2Q63HK3 967 aa12.25□□□□□ -0.45
HDAC7-229ENST00000549883 KIAA0825Q8IV33 1275 aa12.25□□□□□ -0.45
HDAC7-229ENST00000549883 JMYQ8N9B5 988 aa12.25□□□□□ -0.45
HDAC7-229ENST00000549883 MYOZ2Q9NPC6 264 aa12.25□□□□□ -0.45
HDAC7-229ENST00000549883 GGA3Q9NZ52 723 aa12.25□□□□□ -0.45
HDAC7-229ENST00000549883 IQSEC3Q9UPP2 1182 aaPredicted RBP12.25□□□□□ -0.45
HDAC7-229ENST00000549883 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.25□□□□□ -0.45
HDAC7-229ENST00000549883 AOX1Q06278 1338 aa12.25□□□□□ -0.45
HDAC7-229ENST00000549883 MROH5Q6ZUA9 1318 aa12.25□□□□□ -0.45
HDAC7-229ENST00000549883 CNTNAP1P78357 1384 aa12.25□□□□□ -0.45
HDAC7-229ENST00000549883 F8W031 263 aaPredicted RBP12.24□□□□□ -0.45
HDAC7-229ENST00000549883 SASH1O94885 1247 aa12.24□□□□□ -0.45
HDAC7-229ENST00000549883 PDE8BO95263 885 aa12.24□□□□□ -0.45
HDAC7-229ENST00000549883 CELF2O95319 508 aaKnown RBP12.24□□□□□ -0.45
HDAC7-229ENST00000549883 FGFR2P21802 821 aa12.24□□□□□ -0.45
HDAC7-229ENST00000549883 VEGFBP49765 207 aa12.24□□□□□ -0.45
HDAC7-229ENST00000549883 GRIK5Q16478 980 aa12.24□□□□□ -0.45
HDAC7-229ENST00000549883 ANGEL2Q5VTE6 544 aaKnown RBP12.24□□□□□ -0.45
HDAC7-229ENST00000549883 CDC37L1Q7L3B6 337 aa12.24□□□□□ -0.45
HDAC7-229ENST00000549883 KRT26Q7Z3Y9 468 aa12.24□□□□□ -0.45
HDAC7-229ENST00000549883 ZNF804AQ7Z570 1209 aa12.24□□□□□ -0.45
HDAC7-229ENST00000549883 TDRD7Q8NHU6 1098 aaKnown RBP12.24□□□□□ -0.45
HDAC7-229ENST00000549883 ZNF408Q9H9D4 720 aa12.24□□□□□ -0.45
HDAC7-229ENST00000549883 ABT1Q9ULW3 272 aaKnown RBP12.24□□□□□ -0.45
HDAC7-229ENST00000549883 MYH13Q9UKX3 1938 aa12.23□□□□□ -0.45
HDAC7-229ENST00000549883 HIBADHP31937 336 aaKnown RBP12.23□□□□□ -0.45
HDAC7-229ENST00000549883 BCAMP50895 628 aa12.23□□□□□ -0.45
HDAC7-229ENST00000549883 FBXO33Q7Z6M2 555 aa12.23□□□□□ -0.45
HDAC7-229ENST00000549883 C1orf115Q9H7X2 142 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms