RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 PHKA1P46020 1223 aa22.88■■□□□ 1.25
BRF1-215ENST00000549655 KRT32Q14532 448 aa22.88■■□□□ 1.25
BRF1-215ENST00000549655 AMIGO3Q86WK7 504 aa22.88■■□□□ 1.25
BRF1-215ENST00000549655 DSCC1Q9BVC3 393 aa22.88■■□□□ 1.25
BRF1-215ENST00000549655 BCL11BQ9C0K0 894 aaPredicted RBP22.88■■□□□ 1.25
BRF1-215ENST00000549655 ZDHHC9Q9Y397 364 aa22.88■■□□□ 1.25
BRF1-215ENST00000549655 GTF2E1P29083 439 aaPredicted RBP22.87■■□□□ 1.25
BRF1-215ENST00000549655 COL9A3Q14050 684 aaPredicted RBP22.87■■□□□ 1.25
BRF1-215ENST00000549655 ARHGEF1Q92888 912 aaKnown RBP22.87■■□□□ 1.25
BRF1-215ENST00000549655 OSBP2Q969R2 916 aa22.87■■□□□ 1.25
BRF1-215ENST00000549655 SETDB2Q96T68 719 aa22.87■■□□□ 1.25
BRF1-215ENST00000549655 M0R2C6 588 aa22.87■■□□□ 1.25
BRF1-215ENST00000549655 BAG4O95429 457 aaKnown RBP22.87■■□□□ 1.25
BRF1-215ENST00000549655 UQCRFS1P1P0C7P4 283 aa22.87■■□□□ 1.25
BRF1-215ENST00000549655 ARID4AP29374 1257 aaPredicted RBP22.87■■□□□ 1.25
BRF1-215ENST00000549655 SF3B3Q15393 1217 aaKnown RBP22.87■■□□□ 1.25
BRF1-215ENST00000549655 C3orf67Q6ZVT6 689 aa22.87■■□□□ 1.25
BRF1-215ENST00000549655 CDC5LQ99459 802 aaKnown RBP22.87■■□□□ 1.25
BRF1-215ENST00000549655 ARAP2Q8WZ64 1704 aa22.86■■□□□ 1.25
BRF1-215ENST00000549655 TRAK2O60296 914 aa22.86■■□□□ 1.25
BRF1-215ENST00000549655 CYP21A2P08686 494 aa22.86■■□□□ 1.25
BRF1-215ENST00000549655 HSPD1P10809 573 aaKnown RBP22.86■■□□□ 1.25
BRF1-215ENST00000549655 SNAP23O00161 211 aa22.85■■□□□ 1.25
BRF1-215ENST00000549655 RPS6KB1P23443 525 aa22.85■■□□□ 1.25
BRF1-215ENST00000549655 WASHC4Q2M389 1173 aa22.85■■□□□ 1.25
BRF1-215ENST00000549655 SLC10A5Q5PT55 438 aa22.85■■□□□ 1.25
BRF1-215ENST00000549655 ZSCAN31Q96LW9 406 aaPredicted RBP22.85■■□□□ 1.25
BRF1-215ENST00000549655 NYXQ9GZU5 481 aa22.85■■□□□ 1.25
BRF1-215ENST00000549655 LARGE1O95461 756 aa22.85■■□□□ 1.25
BRF1-215ENST00000549655 TTF1Q15361 905 aaPredicted RBP22.85■■□□□ 1.25
BRF1-215ENST00000549655 C4BP0C0L5 1744 aa22.85■■□□□ 1.25
BRF1-215ENST00000549655 CHRNDQ07001 517 aa22.84■■□□□ 1.25
BRF1-215ENST00000549655 APPBP2Q92624 585 aa22.84■■□□□ 1.25
BRF1-215ENST00000549655 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.84■■□□□ 1.25
BRF1-215ENST00000549655 SH2B1Q9NRF2 756 aaPredicted RBP22.84■■□□□ 1.25
BRF1-215ENST00000549655 MYH7P12883 1935 aa22.84■■□□□ 1.25
BRF1-215ENST00000549655 NBPF5PQ86XG9 351 aaPredicted RBP22.83■■□□□ 1.25
BRF1-215ENST00000549655 ANKRD18AQ8IVF6 992 aa22.83■■□□□ 1.25
BRF1-215ENST00000549655 ALDH8A1Q9H2A2 487 aaPredicted RBP22.83■■□□□ 1.25
BRF1-215ENST00000549655 COL4A1P02462 1669 aa22.83■■□□□ 1.25
BRF1-215ENST00000549655 TCEANC2Q96MN5 208 aa22.83■■□□□ 1.24
BRF1-215ENST00000549655 NEK1Q96PY6 1258 aa22.83■■□□□ 1.24
BRF1-215ENST00000549655 LRRC4BQ9NT99 713 aa22.83■■□□□ 1.24
BRF1-215ENST00000549655 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.83■■□□□ 1.24
BRF1-215ENST00000549655 GOLGA6L22H0YM25 854 aa22.82■■□□□ 1.24
BRF1-215ENST00000549655 PHF14O94880 888 aa22.82■■□□□ 1.24
BRF1-215ENST00000549655 PTMSP20962 102 aa22.82■■□□□ 1.24
BRF1-215ENST00000549655 ANKRD1Q15327 319 aa22.82■■□□□ 1.24
BRF1-215ENST00000549655 TRAPPC3LQ5T215 181 aa22.82■■□□□ 1.24
BRF1-215ENST00000549655 FAM196AQ6ZSG2 479 aa22.82■■□□□ 1.24
BRF1-215ENST00000549655 PIH1D3Q9NQM4 214 aaKnown RBP22.82■■□□□ 1.24
BRF1-215ENST00000549655 COL24A1Q17RW2 1714 aa22.82■■□□□ 1.24
BRF1-215ENST00000549655 CASZ1Q86V15 1759 aa22.82■■□□□ 1.24
BRF1-215ENST00000549655 BRD1O95696 1058 aa22.81■■□□□ 1.24
BRF1-215ENST00000549655 RFC4P35249 363 aa22.81■■□□□ 1.24
BRF1-215ENST00000549655 ZSCAN25Q6NSZ9 544 aa22.81■■□□□ 1.24
BRF1-215ENST00000549655 TPCN1Q9ULQ1 816 aa22.81■■□□□ 1.24
BRF1-215ENST00000549655 ME3Q16798 604 aa22.81■■□□□ 1.24
BRF1-215ENST00000549655 TPTE2Q6XPS3 522 aa22.81■■□□□ 1.24
BRF1-215ENST00000549655 PUS7LQ9H0K6 701 aaKnown RBP22.81■■□□□ 1.24
BRF1-215ENST00000549655 SLC9C2Q5TAH2 1124 aa22.8■■□□□ 1.24
BRF1-215ENST00000549655 CCDC83Q8IWF9 413 aa22.8■■□□□ 1.24
BRF1-215ENST00000549655 SPATA5Q8NB90 893 aa22.8■■□□□ 1.24
BRF1-215ENST00000549655 TAF1P21675 1872 aa22.8■■□□□ 1.24
BRF1-215ENST00000549655 IDH1O75874 414 aaKnown RBP22.8■■□□□ 1.24
BRF1-215ENST00000549655 ADD2P35612 726 aa22.8■■□□□ 1.24
BRF1-215ENST00000549655 TOB2Q14106 344 aaPredicted RBP22.8■■□□□ 1.24
BRF1-215ENST00000549655 FOXD4L5Q5VV16 416 aaPredicted RBP22.8■■□□□ 1.24
BRF1-215ENST00000549655 KRT27Q7Z3Y8 459 aa22.8■■□□□ 1.24
BRF1-215ENST00000549655 FOXD4L4Q8WXT5 416 aaPredicted RBP22.8■■□□□ 1.24
BRF1-215ENST00000549655 BSDC1Q9NW68 430 aaPredicted RBP22.8■■□□□ 1.24
BRF1-215ENST00000549655 C4AP0C0L4 1744 aa22.79■■□□□ 1.24
BRF1-215ENST00000549655 RASGRF1Q13972 1273 aa22.79■■□□□ 1.24
BRF1-215ENST00000549655 MCTP1Q6DN14 999 aa22.79■■□□□ 1.24
BRF1-215ENST00000549655 STOX1Q6ZVD7 989 aa22.79■■□□□ 1.24
BRF1-215ENST00000549655 NLRP3Q96P20 1036 aa22.79■■□□□ 1.24
BRF1-215ENST00000549655 SMC3Q9UQE7 1217 aa22.79■■□□□ 1.24
BRF1-215ENST00000549655 MYO5AQ9Y4I1 1855 aaKnown RBP22.78■■□□□ 1.24
BRF1-215ENST00000549655 BCAMP50895 628 aa22.78■■□□□ 1.24
BRF1-215ENST00000549655 BRWD3Q6RI45 1802 aa22.78■■□□□ 1.24
BRF1-215ENST00000549655 FOXP2O15409 715 aa22.78■■□□□ 1.24
BRF1-215ENST00000549655 A0A0G2JLW4 131 aa22.77■■□□□ 1.24
BRF1-215ENST00000549655 GPAA1O43292 621 aa22.77■■□□□ 1.24
BRF1-215ENST00000549655 ST3GAL1Q11201 340 aa22.77■■□□□ 1.24
BRF1-215ENST00000549655 UBE3CQ15386 1083 aa22.77■■□□□ 1.24
BRF1-215ENST00000549655 CCDC24Q8N4L8 307 aa22.77■■□□□ 1.24
BRF1-215ENST00000549655 NECAB1Q8N987 351 aa22.77■■□□□ 1.24
BRF1-215ENST00000549655 CELF1Q92879 486 aaKnown RBP22.77■■□□□ 1.24
BRF1-215ENST00000549655 CTNNA3Q9UI47 895 aa22.77■■□□□ 1.24
BRF1-215ENST00000549655 HMGB1P09429 215 aaKnown RBP22.76■■□□□ 1.23
BRF1-215ENST00000549655 SKOR2Q2VWA4 1001 aaPredicted RBP22.76■■□□□ 1.23
BRF1-215ENST00000549655 MINPP1Q9UNW1 487 aa22.76■■□□□ 1.23
BRF1-215ENST00000549655 TRIM37O94972 964 aa22.76■■□□□ 1.23
BRF1-215ENST00000549655 PDE6AP16499 860 aa22.76■■□□□ 1.23
BRF1-215ENST00000549655 ADRA2BP18089 450 aa22.76■■□□□ 1.23
BRF1-215ENST00000549655 TTLL5Q6EMB2 1281 aa22.76■■□□□ 1.23
BRF1-215ENST00000549655 GZF1Q9H116 711 aaPredicted RBP22.76■■□□□ 1.23
BRF1-215ENST00000549655 WWC3Q9ULE0 1092 aa22.76■■□□□ 1.23
BRF1-215ENST00000549655 WDR33Q9C0J8 1336 aaKnown RBP22.75■■□□□ 1.23
BRF1-215ENST00000549655 E7EWF7 191 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms