RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 CACTIN-AS1Q8N1I8 211 aa7.48□□□□□ -1.21
SNRPF-202ENST00000549580 CARD10Q9BWT7 1032 aa7.48□□□□□ -1.21
SNRPF-202ENST00000549580 PPP1R12CQ9BZL4 782 aa7.48□□□□□ -1.21
SNRPF-202ENST00000549580 ANGEL1Q9UNK9 670 aaKnown RBP7.48□□□□□ -1.21
SNRPF-202ENST00000549580 PPME1Q9Y570 386 aa7.48□□□□□ -1.21
SNRPF-202ENST00000549580 WDR64B1ANS9 1081 aa7.47□□□□□ -1.21
SNRPF-202ENST00000549580 PDE4CQ08493 712 aa7.47□□□□□ -1.21
SNRPF-202ENST00000549580 KANK4Q5T7N3 995 aaPredicted RBP7.47□□□□□ -1.21
SNRPF-202ENST00000549580 COL13A1Q5TAT6 717 aaPredicted RBP7.47□□□□□ -1.21
SNRPF-202ENST00000549580 BEND4Q6ZU67 534 aa7.47□□□□□ -1.21
SNRPF-202ENST00000549580 COL26A1Q96A83 441 aa7.47□□□□□ -1.21
SNRPF-202ENST00000549580 LACRTQ9GZZ8 138 aa7.47□□□□□ -1.21
SNRPF-202ENST00000549580 DDX3YO15523 660 aaKnown RBP7.46□□□□□ -1.22
SNRPF-202ENST00000549580 SOX18P35713 384 aa7.46□□□□□ -1.22
SNRPF-202ENST00000549580 ATP11AP98196 1134 aa7.46□□□□□ -1.22
SNRPF-202ENST00000549580 ANKMY2Q8IV38 441 aa7.46□□□□□ -1.22
SNRPF-202ENST00000549580 DBX1A6NMT0 343 aa7.45□□□□□ -1.22
SNRPF-202ENST00000549580 BMP3P12645 472 aa7.45□□□□□ -1.22
SNRPF-202ENST00000549580 WEE1P30291 646 aa7.45□□□□□ -1.22
SNRPF-202ENST00000549580 MYO19Q96H55 970 aa7.45□□□□□ -1.22
SNRPF-202ENST00000549580 FBXL18Q96ME1 805 aa7.45□□□□□ -1.22
SNRPF-202ENST00000549580 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.44□□□□□ -1.22
SNRPF-202ENST00000549580 USP17L15C9J2P7 530 aa7.44□□□□□ -1.22
SNRPF-202ENST00000549580 USP17L10C9JJH3 530 aa7.44□□□□□ -1.22
SNRPF-202ENST00000549580 USP17L13C9JLJ4 530 aa7.44□□□□□ -1.22
SNRPF-202ENST00000549580 USP17L12C9JPN9 530 aa7.44□□□□□ -1.22
SNRPF-202ENST00000549580 USP17L11C9JVI0 530 aa7.44□□□□□ -1.22
SNRPF-202ENST00000549580 USP17L21D6R901 530 aa7.44□□□□□ -1.22
SNRPF-202ENST00000549580 USP17L18D6R9N7 530 aa7.44□□□□□ -1.22
SNRPF-202ENST00000549580 USP17L22D6RA61 530 aa7.44□□□□□ -1.22
SNRPF-202ENST00000549580 USP17L17D6RBQ6 530 aa7.44□□□□□ -1.22
SNRPF-202ENST00000549580 USP17L19D6RCP7 530 aa7.44□□□□□ -1.22
SNRPF-202ENST00000549580 USP17L20D6RJB6 530 aa7.44□□□□□ -1.22
SNRPF-202ENST00000549580 USP17L24Q0WX57 530 aa7.44□□□□□ -1.22
SNRPF-202ENST00000549580 TRIP4Q15650 581 aaPredicted RBP7.44□□□□□ -1.22
SNRPF-202ENST00000549580 FAM26DQ5JW98 314 aa7.44□□□□□ -1.22
SNRPF-202ENST00000549580 ZNF648Q5T619 568 aaPredicted RBP7.44□□□□□ -1.22
SNRPF-202ENST00000549580 VSIG10LQ86VR7 867 aa7.44□□□□□ -1.22
SNRPF-202ENST00000549580 FOXD4L4Q8WXT5 416 aaPredicted RBP7.44□□□□□ -1.22
SNRPF-202ENST00000549580 VTI1AQ96AJ9 217 aa7.44□□□□□ -1.22
SNRPF-202ENST00000549580 RBSNQ9H1K0 784 aa7.44□□□□□ -1.22
SNRPF-202ENST00000549580 FOSL1P15407 271 aa7.43□□□□□ -1.22
SNRPF-202ENST00000549580 RFX1P22670 979 aa7.43□□□□□ -1.22
SNRPF-202ENST00000549580 PREPP48147 710 aa7.43□□□□□ -1.22
SNRPF-202ENST00000549580 COX20Q5RI15 118 aa7.43□□□□□ -1.22
SNRPF-202ENST00000549580 UBASH3BQ8TF42 649 aa7.43□□□□□ -1.22
SNRPF-202ENST00000549580 MFSD14AQ96MC6 490 aa7.43□□□□□ -1.22
SNRPF-202ENST00000549580 KCNF1Q9H3M0 494 aa7.43□□□□□ -1.22
SNRPF-202ENST00000549580 USTQ9Y2C2 406 aa7.43□□□□□ -1.22
SNRPF-202ENST00000549580 CCDC9Q9Y3X0 531 aaKnown RBP7.43□□□□□ -1.22
SNRPF-202ENST00000549580 ADAM11O75078 769 aa7.42□□□□□ -1.22
SNRPF-202ENST00000549580 DUOXA2Q1HG44 320 aa7.42□□□□□ -1.22
SNRPF-202ENST00000549580 CEP135Q66GS9 1140 aa7.42□□□□□ -1.22
SNRPF-202ENST00000549580 AEBP1Q8IUX7 1158 aa7.42□□□□□ -1.22
SNRPF-202ENST00000549580 ETFBKMTQ8IXQ9 262 aa7.42□□□□□ -1.22
SNRPF-202ENST00000549580 HIF3AQ9Y2N7 669 aa7.42□□□□□ -1.22
SNRPF-202ENST00000549580 FOXO3O43524 673 aa7.41□□□□□ -1.22
SNRPF-202ENST00000549580 ZNF124Q15973 351 aa7.41□□□□□ -1.22
SNRPF-202ENST00000549580 TP53INP2Q8IXH6 220 aa7.41□□□□□ -1.22
SNRPF-202ENST00000549580 SH2B1Q9NRF2 756 aaPredicted RBP7.41□□□□□ -1.22
SNRPF-202ENST00000549580 LEMD3Q9Y2U8 911 aa7.41□□□□□ -1.22
SNRPF-202ENST00000549580 PAPLNO95428 1278 aa7.4□□□□□ -1.22
SNRPF-202ENST00000549580 F13BP05160 661 aa7.4□□□□□ -1.22
SNRPF-202ENST00000549580 LMOD1P29536 600 aaPredicted RBP7.4□□□□□ -1.22
SNRPF-202ENST00000549580 CPSF6Q16630 551 aaKnown RBP eCLIP7.4□□□□□ -1.22
SNRPF-202ENST00000549580 NLRP13Q86W25 1043 aa7.4□□□□□ -1.22
SNRPF-202ENST00000549580 KLHL23Q8NBE8 558 aa7.4□□□□□ -1.22
SNRPF-202ENST00000549580 KLHDC7BQ96G42 594 aa7.4□□□□□ -1.22
SNRPF-202ENST00000549580 SAP130Q9H0E3 1048 aa7.4□□□□□ -1.22
SNRPF-202ENST00000549580 RASSF4Q9H2L5 321 aa7.4□□□□□ -1.22
SNRPF-202ENST00000549580 FAM196BA6NMK8 535 aa7.39□□□□□ -1.23
SNRPF-202ENST00000549580 FSCN2O14926 492 aa7.39□□□□□ -1.23
SNRPF-202ENST00000549580 ATG7O95352 703 aa7.39□□□□□ -1.23
SNRPF-202ENST00000549580 EPHA1P21709 976 aa7.39□□□□□ -1.23
SNRPF-202ENST00000549580 CDC27P30260 824 aa7.39□□□□□ -1.23
SNRPF-202ENST00000549580 FKBP5Q13451 457 aaPredicted RBP7.39□□□□□ -1.23
SNRPF-202ENST00000549580 ANKRD34AQ69YU3 496 aa7.39□□□□□ -1.23
SNRPF-202ENST00000549580 OR13H1Q8NG92 308 aa7.38□□□□□ -1.23
SNRPF-202ENST00000549580 VRTNQ9H8Y1 702 aa7.38□□□□□ -1.23
SNRPF-202ENST00000549580 ATG3Q9NT62 314 aa7.38□□□□□ -1.23
SNRPF-202ENST00000549580 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.38□□□□□ -1.23
SNRPF-202ENST00000549580 SART1O43290 800 aaKnown RBP7.37□□□□□ -1.23
SNRPF-202ENST00000549580 BRD1O95696 1058 aa7.37□□□□□ -1.23
SNRPF-202ENST00000549580 CYP2E1P05181 493 aaPredicted RBP7.37□□□□□ -1.23
SNRPF-202ENST00000549580 PRIMPOLQ96LW4 560 aa7.37□□□□□ -1.23
SNRPF-202ENST00000549580 PATL2C9JE40 543 aaKnown RBP7.36□□□□□ -1.23
SNRPF-202ENST00000549580 UBAP1LF5GYI3 381 aa7.36□□□□□ -1.23
SNRPF-202ENST00000549580 KCNA1Q09470 495 aa7.36□□□□□ -1.23
SNRPF-202ENST00000549580 CDCA8Q53HL2 280 aa7.36□□□□□ -1.23
SNRPF-202ENST00000549580 SHISA5Q8N114 240 aa7.36□□□□□ -1.23
SNRPF-202ENST00000549580 GIMAP7Q8NHV1 300 aa7.36□□□□□ -1.23
SNRPF-202ENST00000549580 PAK6Q9NQU5 681 aaPredicted RBP7.36□□□□□ -1.23
SNRPF-202ENST00000549580 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.36□□□□□ -1.23
SNRPF-202ENST00000549580 CARMIL2Q6F5E8 1435 aa7.35□□□□□ -1.23
SNRPF-202ENST00000549580 SMNDC1O75940 238 aaKnown RBP eCLIP7.35□□□□□ -1.23
SNRPF-202ENST00000549580 MAP4P27816 1152 aaKnown RBP7.35□□□□□ -1.23
SNRPF-202ENST00000549580 HYAL2Q12891 473 aa7.35□□□□□ -1.23
SNRPF-202ENST00000549580 KRTAP5-3Q6L8H2 238 aa7.35□□□□□ -1.23
SNRPF-202ENST00000549580 CAPN12Q6ZSI9 719 aa7.35□□□□□ -1.23
SNRPF-202ENST00000549580 OSBPL1AQ9BXW6 950 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms