RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 HSPD1P10809 573 aaKnown RBP11.91□□□□□ -0.5
RAB5B-206ENST00000549505 CCDC152Q4G0S7 254 aa11.91□□□□□ -0.5
RAB5B-206ENST00000549505 SYNE4Q8N205 404 aa11.91□□□□□ -0.5
RAB5B-206ENST00000549505 TPCN1Q9ULQ1 816 aa11.91□□□□□ -0.5
RAB5B-206ENST00000549505 CHMP3Q9Y3E7 222 aa11.91□□□□□ -0.5
RAB5B-206ENST00000549505 GOLIM4O00461 696 aa11.91□□□□□ -0.5
RAB5B-206ENST00000549505 ADD2P35612 726 aa11.91□□□□□ -0.5
RAB5B-206ENST00000549505 ME3Q16798 604 aa11.91□□□□□ -0.5
RAB5B-206ENST00000549505 TTC39AQ5SRH9 613 aa11.91□□□□□ -0.5
RAB5B-206ENST00000549505 DDX46Q7L014 1031 aaKnown RBP11.91□□□□□ -0.5
RAB5B-206ENST00000549505 CHMP4CQ96CF2 233 aa11.91□□□□□ -0.5
RAB5B-206ENST00000549505 NEK1Q96PY6 1258 aa11.91□□□□□ -0.5
RAB5B-206ENST00000549505 CDC5LQ99459 802 aaKnown RBP11.91□□□□□ -0.5
RAB5B-206ENST00000549505 BCL2L12Q9HB09 334 aa11.91□□□□□ -0.5
RAB5B-206ENST00000549505 TBC1D2BQ9UPU7 963 aa11.91□□□□□ -0.5
RAB5B-206ENST00000549505 ZSCAN22P10073 491 aaPredicted RBP11.91□□□□□ -0.5
RAB5B-206ENST00000549505 CTNNA3Q9UI47 895 aa11.91□□□□□ -0.5
RAB5B-206ENST00000549505 NID2Q14112 1375 aa11.9□□□□□ -0.5
RAB5B-206ENST00000549505 KCNQ2O43526 872 aa11.9□□□□□ -0.5
RAB5B-206ENST00000549505 LARGE1O95461 756 aa11.9□□□□□ -0.5
RAB5B-206ENST00000549505 HMGB2P26583 209 aaKnown RBP11.9□□□□□ -0.5
RAB5B-206ENST00000549505 MCAMP43121 646 aa11.9□□□□□ -0.5
RAB5B-206ENST00000549505 METTL24Q5JXM2 366 aa11.9□□□□□ -0.5
RAB5B-206ENST00000549505 SMARCC2Q8TAQ2 1214 aa11.9□□□□□ -0.5
RAB5B-206ENST00000549505 OSBP2Q969R2 916 aa11.9□□□□□ -0.5
RAB5B-206ENST00000549505 NEUROD6Q96NK8 337 aa11.9□□□□□ -0.5
RAB5B-206ENST00000549505 DNAJC2Q99543 621 aaKnown RBP11.9□□□□□ -0.5
RAB5B-206ENST00000549505 LRRC37AA6NMS7 1700 aa11.9□□□□□ -0.5
RAB5B-206ENST00000549505 GPTP24298 496 aa11.9□□□□□ -0.5
RAB5B-206ENST00000549505 NRXN2Q9P2S2 1712 aa11.9□□□□□ -0.5
RAB5B-206ENST00000549505 M0R2C6 588 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 MBD3O95983 291 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 SCARF1Q14162 830 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 FAM98CQ17RN3 349 aaKnown RBP11.89□□□□□ -0.51
RAB5B-206ENST00000549505 DHX32Q7L7V1 743 aaKnown RBP11.89□□□□□ -0.51
RAB5B-206ENST00000549505 CERKQ8TCT0 537 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 GJD4Q96KN9 370 aaPredicted RBP11.89□□□□□ -0.51
RAB5B-206ENST00000549505 TAF6LQ9Y6J9 622 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 MYH15Q9Y2K3 1946 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 PFKFB2O60825 505 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 ADRA2BP18089 450 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 STOX1Q6ZVD7 989 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 SYTL4Q96C24 671 aaPredicted RBP11.89□□□□□ -0.51
RAB5B-206ENST00000549505 MTA3Q9BTC8 594 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.89□□□□□ -0.51
RAB5B-206ENST00000549505 USP21Q9UK80 565 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 SALL1Q9NSC2 1324 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 IRS2Q9Y4H2 1338 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 NUTM2BA6NNL0 878 aaPredicted RBP11.89□□□□□ -0.51
RAB5B-206ENST00000549505 NUTM2EB1AL46 878 aaPredicted RBP11.89□□□□□ -0.51
RAB5B-206ENST00000549505 TAF7LQ5H9L4 462 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 CCDC102BQ68D86 513 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 NUTM2AQ8IVF1 878 aaPredicted RBP11.89□□□□□ -0.51
RAB5B-206ENST00000549505 GTF3C6Q969F1 213 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 ZNF274Q96GC6 653 aaPredicted RBP11.89□□□□□ -0.51
RAB5B-206ENST00000549505 ACSBG1Q96GR2 724 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 NGLY1Q96IV0 654 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 SEC62Q99442 399 aaKnown RBP11.89□□□□□ -0.51
RAB5B-206ENST00000549505 NYXQ9GZU5 481 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 FOXD4L1Q9NU39 408 aa11.89□□□□□ -0.51
RAB5B-206ENST00000549505 BSDC1Q9NW68 430 aaPredicted RBP11.89□□□□□ -0.51
RAB5B-206ENST00000549505 A0A0U1RQG5 324 aaPredicted RBP11.88□□□□□ -0.51
RAB5B-206ENST00000549505 STX6O43752 255 aa11.88□□□□□ -0.51
RAB5B-206ENST00000549505 SYT1P21579 422 aa11.88□□□□□ -0.51
RAB5B-206ENST00000549505 ZAP70P43403 619 aa11.88□□□□□ -0.51
RAB5B-206ENST00000549505 MRE11P49959 708 aa11.88□□□□□ -0.51
RAB5B-206ENST00000549505 MTMR6Q9Y217 621 aa11.88□□□□□ -0.51
RAB5B-206ENST00000549505 PNPLA7Q6ZV29 1317 aa11.88□□□□□ -0.51
RAB5B-206ENST00000549505 TNRC6CQ9HCJ0 1690 aaKnown RBP11.88□□□□□ -0.51
RAB5B-206ENST00000549505 SLC5A1P13866 664 aa11.88□□□□□ -0.51
RAB5B-206ENST00000549505 PDCP20941 246 aa11.88□□□□□ -0.51
RAB5B-206ENST00000549505 ATP6V1DQ9Y5K8 247 aa11.88□□□□□ -0.51
RAB5B-206ENST00000549505 CACNA1SQ13698 1873 aa11.87□□□□□ -0.51
RAB5B-206ENST00000549505 PIP4K2BP78356 416 aa11.87□□□□□ -0.51
RAB5B-206ENST00000549505 UBE4AQ14139 1066 aa11.87□□□□□ -0.51
RAB5B-206ENST00000549505 ELP1O95163 1332 aa11.87□□□□□ -0.51
RAB5B-206ENST00000549505 SEMA3EO15041 775 aa11.87□□□□□ -0.51
RAB5B-206ENST00000549505 F13A1P00488 732 aa11.87□□□□□ -0.51
RAB5B-206ENST00000549505 CNNM1Q9NRU3 951 aa11.87□□□□□ -0.51
RAB5B-206ENST00000549505 BRPF3Q9ULD4 1205 aa11.87□□□□□ -0.51
RAB5B-206ENST00000549505 SMC3Q9UQE7 1217 aa11.87□□□□□ -0.51
RAB5B-206ENST00000549505 NIP7Q9Y221 180 aaKnown RBP eCLIP11.87□□□□□ -0.51
RAB5B-206ENST00000549505 LTBP1Q14766 1721 aa11.87□□□□□ -0.51
RAB5B-206ENST00000549505 E7EWF7 191 aa11.86□□□□□ -0.51
RAB5B-206ENST00000549505 CCDC129Q6ZRS4 1044 aa11.86□□□□□ -0.51
RAB5B-206ENST00000549505 GPT2Q8TD30 523 aa11.86□□□□□ -0.51
RAB5B-206ENST00000549505 DLEC1Q9Y238 1755 aa11.86□□□□□ -0.51
RAB5B-206ENST00000549505 MYO5AQ9Y4I1 1855 aaKnown RBP11.86□□□□□ -0.51
RAB5B-206ENST00000549505 COL9A3Q14050 684 aaPredicted RBP11.86□□□□□ -0.51
RAB5B-206ENST00000549505 MB21D2Q8IYB1 491 aaPredicted RBP11.86□□□□□ -0.51
RAB5B-206ENST00000549505 C8orf37Q96NL8 207 aa11.86□□□□□ -0.51
RAB5B-206ENST00000549505 BCL11BQ9C0K0 894 aaPredicted RBP11.86□□□□□ -0.51
RAB5B-206ENST00000549505 GOLGA6L3A6NEY3 463 aa11.86□□□□□ -0.51
RAB5B-206ENST00000549505 C15orf52Q6ZUT6 534 aaKnown RBP11.86□□□□□ -0.51
RAB5B-206ENST00000549505 PIH1D3Q9NQM4 214 aaKnown RBP11.86□□□□□ -0.51
RAB5B-206ENST00000549505 NDUFB9Q9Y6M9 179 aa11.86□□□□□ -0.51
RAB5B-206ENST00000549505 CHGBP05060 677 aa11.85□□□□□ -0.51
RAB5B-206ENST00000549505 CPA1P15085 419 aa11.85□□□□□ -0.51
RAB5B-206ENST00000549505 GJB2P29033 226 aa11.85□□□□□ -0.51
RAB5B-206ENST00000549505 KCNJ4P48050 445 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms