RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 EAPPQ56P03 285 aaPredicted RBP8.04□□□□□ -1.12
PRDM4-204ENST00000549416 KIAA0319Q5VV43 1072 aa8.04□□□□□ -1.12
PRDM4-204ENST00000549416 CEP135Q66GS9 1140 aa8.04□□□□□ -1.12
PRDM4-204ENST00000549416 ILDR2Q71H61 639 aa8.04□□□□□ -1.12
PRDM4-204ENST00000549416 POP1Q99575 1024 aaKnown RBP8.04□□□□□ -1.12
PRDM4-204ENST00000549416 CNTNAP5Q8WYK1 1306 aa8.03□□□□□ -1.12
PRDM4-204ENST00000549416 TMEM102Q8N9M5 508 aaPredicted RBP8.03□□□□□ -1.12
PRDM4-204ENST00000549416 RGS22Q8NE09 1264 aa8.03□□□□□ -1.12
PRDM4-204ENST00000549416 NXPE3Q969Y0 559 aa8.03□□□□□ -1.12
PRDM4-204ENST00000549416 RNF19AQ9NV58 838 aa8.03□□□□□ -1.12
PRDM4-204ENST00000549416 BAG6P46379 1132 aa8.02□□□□□ -1.13
PRDM4-204ENST00000549416 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.02□□□□□ -1.13
PRDM4-204ENST00000549416 FBF1Q8TES7 1133 aa8.02□□□□□ -1.13
PRDM4-204ENST00000549416 TRIM11Q96F44 468 aa8.02□□□□□ -1.13
PRDM4-204ENST00000549416 TCF12Q99081 682 aa8.02□□□□□ -1.13
PRDM4-204ENST00000549416 CCDC9Q9Y3X0 531 aaKnown RBP8.02□□□□□ -1.13
PRDM4-204ENST00000549416 PDE2AO00408 941 aaPredicted RBP8.01□□□□□ -1.13
PRDM4-204ENST00000549416 SMNDC1O75940 238 aaKnown RBP eCLIP8.01□□□□□ -1.13
PRDM4-204ENST00000549416 ATP2B2Q01814 1243 aa8.01□□□□□ -1.13
PRDM4-204ENST00000549416 ALG1LQ6GMV1 187 aa8.01□□□□□ -1.13
PRDM4-204ENST00000549416 GDF6Q6KF10 455 aaPredicted RBP8.01□□□□□ -1.13
PRDM4-204ENST00000549416 LACRTQ9GZZ8 138 aa8.01□□□□□ -1.13
PRDM4-204ENST00000549416 SUV39H2Q9H5I1 410 aa8.01□□□□□ -1.13
PRDM4-204ENST00000549416 METTL12A8MUP2 240 aa8□□□□□ -1.13
PRDM4-204ENST00000549416 PRPF40AO75400 957 aaKnown RBP8□□□□□ -1.13
PRDM4-204ENST00000549416 GRM2Q14416 872 aa8□□□□□ -1.13
PRDM4-204ENST00000549416 CCNJLQ8IV13 435 aa8□□□□□ -1.13
PRDM4-204ENST00000549416 GLIS3Q8NEA6 775 aa8□□□□□ -1.13
PRDM4-204ENST00000549416 BHLHE41Q9C0J9 482 aaPredicted RBP8□□□□□ -1.13
PRDM4-204ENST00000549416 EHD4Q9H223 541 aa8□□□□□ -1.13
PRDM4-204ENST00000549416 LIN7BQ9HAP6 207 aa8□□□□□ -1.13
PRDM4-204ENST00000549416 STK17AQ9UEE5 414 aa8□□□□□ -1.13
PRDM4-204ENST00000549416 MKL2Q9ULH7 1088 aa8□□□□□ -1.13
PRDM4-204ENST00000549416 GADD45BO75293 160 aaPredicted RBP7.99□□□□□ -1.13
PRDM4-204ENST00000549416 MSL1Q68DK7 614 aa7.99□□□□□ -1.13
PRDM4-204ENST00000549416 DUSP9Q99956 384 aaKnown RBP7.99□□□□□ -1.13
PRDM4-204ENST00000549416 BCL2L13Q9BXK5 485 aa7.99□□□□□ -1.13
PRDM4-204ENST00000549416 ADAM19Q9H013 955 aa7.99□□□□□ -1.13
PRDM4-204ENST00000549416 NLRP2Q9NX02 1062 aa7.99□□□□□ -1.13
PRDM4-204ENST00000549416 FAM181BA6NEQ2 426 aa7.98□□□□□ -1.13
PRDM4-204ENST00000549416 GNB5O14775 395 aa7.98□□□□□ -1.13
PRDM4-204ENST00000549416 GRIA4P48058 902 aa7.98□□□□□ -1.13
PRDM4-204ENST00000549416 DMRTC2Q8IXT2 367 aaPredicted RBP7.98□□□□□ -1.13
PRDM4-204ENST00000549416 IL22RA1Q8N6P7 574 aa7.98□□□□□ -1.13
PRDM4-204ENST00000549416 BEND7Q8N7W2 519 aaPredicted RBP7.98□□□□□ -1.13
PRDM4-204ENST00000549416 GIPC2Q8TF65 315 aa7.98□□□□□ -1.13
PRDM4-204ENST00000549416 PLVAPQ9BX97 442 aa7.98□□□□□ -1.13
PRDM4-204ENST00000549416 BCO2Q9BYV7 579 aa7.98□□□□□ -1.13
PRDM4-204ENST00000549416 OSBPL7Q9BZF2 842 aa7.98□□□□□ -1.13
PRDM4-204ENST00000549416 SH2B1Q9NRF2 756 aaPredicted RBP7.98□□□□□ -1.13
PRDM4-204ENST00000549416 PTPRAP18433 802 aa7.97□□□□□ -1.13
PRDM4-204ENST00000549416 SPRED3Q2MJR0 410 aa7.97□□□□□ -1.13
PRDM4-204ENST00000549416 PRPF40BQ6NWY9 871 aaKnown RBP7.97□□□□□ -1.13
PRDM4-204ENST00000549416 NXPE4Q6UWF7 544 aa7.97□□□□□ -1.13
PRDM4-204ENST00000549416 PODNQ7Z5L7 613 aa7.97□□□□□ -1.13
PRDM4-204ENST00000549416 WFDC8Q8IUA0 241 aa7.97□□□□□ -1.13
PRDM4-204ENST00000549416 FOXD4L4Q8WXT5 416 aaPredicted RBP7.97□□□□□ -1.13
PRDM4-204ENST00000549416 SCARF2Q96GP6 870 aaPredicted RBP7.97□□□□□ -1.13
PRDM4-204ENST00000549416 ABCB6Q9NP58 842 aa7.97□□□□□ -1.13
PRDM4-204ENST00000549416 SOX13Q9UN79 622 aa7.97□□□□□ -1.13
PRDM4-204ENST00000549416 A0A096LPE4 126 aa7.96□□□□□ -1.14
PRDM4-204ENST00000549416 A0A1W2PPZ6 126 aa7.96□□□□□ -1.14
PRDM4-204ENST00000549416 EPHA1P21709 976 aa7.96□□□□□ -1.14
PRDM4-204ENST00000549416 CDC27P30260 824 aa7.96□□□□□ -1.14
PRDM4-204ENST00000549416 CACTIN-AS1Q8N1I8 211 aa7.96□□□□□ -1.14
PRDM4-204ENST00000549416 ASAP3Q8TDY4 903 aa7.96□□□□□ -1.14
PRDM4-204ENST00000549416 BSNDQ8WZ55 320 aa7.96□□□□□ -1.14
PRDM4-204ENST00000549416 MUC3BQ9H195 1237 aa7.96□□□□□ -1.14
PRDM4-204ENST00000549416 PARP2Q9UGN5 583 aa7.96□□□□□ -1.14
PRDM4-204ENST00000549416 TMEM238LA0A1B0GVL6 79 aa7.95□□□□□ -1.14
PRDM4-204ENST00000549416 ZNF16P17020 682 aaPredicted RBP7.95□□□□□ -1.14
PRDM4-204ENST00000549416 COL8A1P27658 744 aa7.95□□□□□ -1.14
PRDM4-204ENST00000549416 GNA15P30679 374 aa7.95□□□□□ -1.14
PRDM4-204ENST00000549416 FGD1P98174 961 aa7.95□□□□□ -1.14
PRDM4-204ENST00000549416 TRAPPC3LQ5T215 181 aa7.95□□□□□ -1.14
PRDM4-204ENST00000549416 VN1R5Q7Z5H4 357 aa7.95□□□□□ -1.14
PRDM4-204ENST00000549416 TRAK1Q9UPV9 953 aa7.95□□□□□ -1.14
PRDM4-204ENST00000549416 LINC01387J3KSC0 135 aa7.94□□□□□ -1.14
PRDM4-204ENST00000549416 ITPKAP23677 461 aa7.94□□□□□ -1.14
PRDM4-204ENST00000549416 DAB2P98082 770 aa7.94□□□□□ -1.14
PRDM4-204ENST00000549416 TXNDC11Q6PKC3 985 aa7.94□□□□□ -1.14
PRDM4-204ENST00000549416 FAM161BQ96MY7 647 aa7.94□□□□□ -1.14
PRDM4-204ENST00000549416 SPG7Q9UQ90 795 aa7.94□□□□□ -1.14
PRDM4-204ENST00000549416 PPME1Q9Y570 386 aa7.94□□□□□ -1.14
PRDM4-204ENST00000549416 A0A0A0MRY4 1105 aa7.93□□□□□ -1.14
PRDM4-204ENST00000549416 RBM47A0AV96 593 aaKnown RBP7.93□□□□□ -1.14
PRDM4-204ENST00000549416 FAM229AH3BQW9 127 aa7.93□□□□□ -1.14
PRDM4-204ENST00000549416 CDC25BP30305 580 aa7.93□□□□□ -1.14
PRDM4-204ENST00000549416 FCGRTP55899 365 aa7.93□□□□□ -1.14
PRDM4-204ENST00000549416 TMC4Q7Z404 712 aa7.93□□□□□ -1.14
PRDM4-204ENST00000549416 FRMD6Q96NE9 622 aa7.93□□□□□ -1.14
PRDM4-204ENST00000549416 C12orf49Q9H741 205 aa7.93□□□□□ -1.14
PRDM4-204ENST00000549416 PIK3R2O00459 728 aa7.92□□□□□ -1.14
PRDM4-204ENST00000549416 TM4SF5O14894 197 aa7.92□□□□□ -1.14
PRDM4-204ENST00000549416 GIPC1O14908 333 aa7.92□□□□□ -1.14
PRDM4-204ENST00000549416 DEAF1O75398 565 aaPredicted RBP7.92□□□□□ -1.14
PRDM4-204ENST00000549416 SETDB1Q15047 1291 aa7.92□□□□□ -1.14
PRDM4-204ENST00000549416 ZNF326Q5BKZ1 582 aaKnown RBP7.92□□□□□ -1.14
PRDM4-204ENST00000549416 HGSNATQ68CP4 663 aa7.92□□□□□ -1.14
PRDM4-204ENST00000549416 C3orf58Q8NDZ4 430 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms