RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 EHMT1Q9H9B1 1298 aa13.67□□□□□ -0.22
VDR-206ENST00000549336 GJA3Q9Y6H8 435 aa13.67□□□□□ -0.22
VDR-206ENST00000549336 TPM3P06753 285 aa13.67□□□□□ -0.22
VDR-206ENST00000549336 TSPY3P0CV98 308 aa13.67□□□□□ -0.22
VDR-206ENST00000549336 TSPY8P0CW00 308 aa13.67□□□□□ -0.22
VDR-206ENST00000549336 CUL5Q93034 780 aa13.67□□□□□ -0.22
VDR-206ENST00000549336 ESYT1Q9BSJ8 1104 aa13.67□□□□□ -0.22
VDR-206ENST00000549336 LRRC7Q96NW7 1537 aa13.67□□□□□ -0.22
VDR-206ENST00000549336 GOLGA8AA7E2F4 631 aa13.66□□□□□ -0.22
VDR-206ENST00000549336 GOLGA8BA8MQT2 603 aa13.66□□□□□ -0.22
VDR-206ENST00000549336 KDM4AO75164 1064 aa13.66□□□□□ -0.22
VDR-206ENST00000549336 DPY19L2Q6NUT2 758 aa13.66□□□□□ -0.22
VDR-206ENST00000549336 SDF4Q9BRK5 362 aa13.66□□□□□ -0.22
VDR-206ENST00000549336 PNMA6EA0A0J9YXQ4 647 aa13.66□□□□□ -0.22
VDR-206ENST00000549336 GOLGA6L3A6NEY3 463 aa13.66□□□□□ -0.22
VDR-206ENST00000549336 CIAO1O76071 339 aa13.66□□□□□ -0.22
VDR-206ENST00000549336 MBD3O95983 291 aa13.66□□□□□ -0.22
VDR-206ENST00000549336 CYP19A1P11511 503 aaPredicted RBP13.66□□□□□ -0.22
VDR-206ENST00000549336 ZNF76P36508 570 aa13.66□□□□□ -0.22
VDR-206ENST00000549336 KRT85P78386 507 aa13.66□□□□□ -0.22
VDR-206ENST00000549336 CFAP45Q9UL16 551 aa13.66□□□□□ -0.22
VDR-206ENST00000549336 PLEKHM2Q8IWE5 1019 aa13.66□□□□□ -0.22
VDR-206ENST00000549336 MCM9Q9NXL9 1143 aa13.66□□□□□ -0.22
VDR-206ENST00000549336 XDHP47989 1333 aa13.66□□□□□ -0.22
VDR-206ENST00000549336 KLHDC4Q8TBB5 520 aa13.65□□□□□ -0.22
VDR-206ENST00000549336 STX8Q9UNK0 236 aa13.65□□□□□ -0.22
VDR-206ENST00000549336 TAF5LO75529 589 aa13.65□□□□□ -0.22
VDR-206ENST00000549336 TPM1P09493 284 aa13.65□□□□□ -0.22
VDR-206ENST00000549336 PICALMQ13492 652 aa13.65□□□□□ -0.22
VDR-206ENST00000549336 TNIP1Q15025 636 aa13.65□□□□□ -0.22
VDR-206ENST00000549336 MARCH10Q8NA82 808 aaPredicted RBP13.65□□□□□ -0.22
VDR-206ENST00000549336 CEP131Q9UPN4 1083 aa13.65□□□□□ -0.22
VDR-206ENST00000549336 ITSN1Q15811 1721 aa13.65□□□□□ -0.22
VDR-206ENST00000549336 MMP10P09238 476 aa13.65□□□□□ -0.22
VDR-206ENST00000549336 HAND2P61296 217 aa13.65□□□□□ -0.22
VDR-206ENST00000549336 TSR1Q2NL82 804 aaKnown RBP13.65□□□□□ -0.22
VDR-206ENST00000549336 RBM26Q5T8P6 1007 aaKnown RBP13.65□□□□□ -0.22
VDR-206ENST00000549336 TEX11Q8IYF3 940 aa13.65□□□□□ -0.22
VDR-206ENST00000549336 GPR108Q9NPR9 543 aa13.65□□□□□ -0.22
VDR-206ENST00000549336 NPR1P16066 1061 aa13.65□□□□□ -0.22
VDR-206ENST00000549336 WTAPQ15007 396 aa13.65□□□□□ -0.22
VDR-206ENST00000549336 NKX1-1Q15270 411 aaPredicted RBP13.65□□□□□ -0.22
VDR-206ENST00000549336 APPBP2Q92624 585 aa13.65□□□□□ -0.22
VDR-206ENST00000549336 COL15A1P39059 1388 aa13.65□□□□□ -0.23
VDR-206ENST00000549336 H7C1D1 291 aa13.64□□□□□ -0.23
VDR-206ENST00000549336 PES1O00541 588 aaKnown RBP13.64□□□□□ -0.23
VDR-206ENST00000549336 KINO60870 393 aaKnown RBP13.64□□□□□ -0.23
VDR-206ENST00000549336 KCNQ4P56696 695 aa13.64□□□□□ -0.23
VDR-206ENST00000549336 GRIPAP1Q4V328 841 aa13.64□□□□□ -0.23
VDR-206ENST00000549336 SASS6Q6UVJ0 657 aa13.64□□□□□ -0.23
VDR-206ENST00000549336 PRAMEF22A3QJZ6 481 aa13.64□□□□□ -0.23
VDR-206ENST00000549336 NMIQ13287 307 aaPredicted RBP13.64□□□□□ -0.23
VDR-206ENST00000549336 SH2D4AQ9H788 454 aa13.64□□□□□ -0.23
VDR-206ENST00000549336 RBM8AQ9Y5S9 174 aaKnown RBP13.64□□□□□ -0.23
VDR-206ENST00000549336 KCNQ2O43526 872 aa13.64□□□□□ -0.23
VDR-206ENST00000549336 CCDC171Q6TFL3 1326 aa13.64□□□□□ -0.23
VDR-206ENST00000549336 KBTBD3Q8NAB2 608 aa13.64□□□□□ -0.23
VDR-206ENST00000549336 SPATA5Q8NB90 893 aa13.64□□□□□ -0.23
VDR-206ENST00000549336 SEMA3EO15041 775 aa13.63□□□□□ -0.23
VDR-206ENST00000549336 ATP5JP18859 108 aa13.63□□□□□ -0.23
VDR-206ENST00000549336 RBM27Q9P2N5 1060 aaKnown RBP13.63□□□□□ -0.23
VDR-206ENST00000549336 PPEF1O14829 653 aaPredicted RBP13.63□□□□□ -0.23
VDR-206ENST00000549336 SSRP1Q08945 709 aaKnown RBP13.63□□□□□ -0.23
VDR-206ENST00000549336 MPHOSPH6Q99547 160 aaKnown RBP13.63□□□□□ -0.23
VDR-206ENST00000549336 PDE8BO95263 885 aa13.63□□□□□ -0.23
VDR-206ENST00000549336 CCDC125Q86Z20 511 aa13.63□□□□□ -0.23
VDR-206ENST00000549336 R3HCC1Q9Y3T6 440 aaKnown RBP13.63□□□□□ -0.23
VDR-206ENST00000549336 CALM1P0DP23 149 aa13.62□□□□□ -0.23
VDR-206ENST00000549336 CALM2P0DP24 149 aa13.62□□□□□ -0.23
VDR-206ENST00000549336 CALM3P0DP25 149 aa13.62□□□□□ -0.23
VDR-206ENST00000549336 TNFAIP1Q13829 316 aa13.62□□□□□ -0.23
VDR-206ENST00000549336 GREM2Q9H772 168 aa13.62□□□□□ -0.23
VDR-206ENST00000549336 FAM13BQ9NYF5 915 aa13.62□□□□□ -0.23
VDR-206ENST00000549336 MIGA1Q8NAN2 632 aa13.62□□□□□ -0.23
VDR-206ENST00000549336 RTN4Q9NQC3 1192 aaKnown RBP13.62□□□□□ -0.23
VDR-206ENST00000549336 IARSP41252 1262 aaKnown RBP13.62□□□□□ -0.23
VDR-206ENST00000549336 CHRNDQ07001 517 aa13.62□□□□□ -0.23
VDR-206ENST00000549336 DLGAP5Q15398 846 aa13.62□□□□□ -0.23
VDR-206ENST00000549336 CCDC93Q567U6 631 aa13.62□□□□□ -0.23
VDR-206ENST00000549336 C8orf76Q96K31 380 aa13.62□□□□□ -0.23
VDR-206ENST00000549336 SRP68Q9UHB9 627 aaKnown RBP13.62□□□□□ -0.23
VDR-206ENST00000549336 MBD4O95243 580 aa13.62□□□□□ -0.23
VDR-206ENST00000549336 ERFEQ4G0M1 354 aa13.62□□□□□ -0.23
VDR-206ENST00000549336 IFIT1BQ5T764 474 aaKnown RBP13.62□□□□□ -0.23
VDR-206ENST00000549336 NAT10Q9H0A0 1025 aaKnown RBP13.62□□□□□ -0.23
VDR-206ENST00000549336 CARMIL3Q8ND23 1372 aa13.61□□□□□ -0.23
VDR-206ENST00000549336 ZNF804BA4D1E1 1349 aa13.61□□□□□ -0.23
VDR-206ENST00000549336 ARHGEF28Q8N1W1 1705 aaKnown RBP13.61□□□□□ -0.23
VDR-206ENST00000549336 ARHGAP27Q6ZUM4 889 aa13.61□□□□□ -0.23
VDR-206ENST00000549336 MASTLQ96GX5 879 aa13.61□□□□□ -0.23
VDR-206ENST00000549336 BMP2KQ9NSY1 1161 aaPredicted RBP13.61□□□□□ -0.23
VDR-206ENST00000549336 LETM1O95202 739 aaPredicted RBP13.61□□□□□ -0.23
VDR-206ENST00000549336 KRT18P05783 430 aaKnown RBP13.61□□□□□ -0.23
VDR-206ENST00000549336 MSNP26038 577 aaKnown RBP13.61□□□□□ -0.23
VDR-206ENST00000549336 METAP2P50579 478 aaKnown RBP eCLIP13.61□□□□□ -0.23
VDR-206ENST00000549336 CCDC83Q8IWF9 413 aa13.61□□□□□ -0.23
VDR-206ENST00000549336 RTKN2Q8IZC4 609 aa13.61□□□□□ -0.23
VDR-206ENST00000549336 TRIM28Q13263 835 aaKnown RBP13.6□□□□□ -0.23
VDR-206ENST00000549336 WDR78Q5VTH9 848 aa13.6□□□□□ -0.23
VDR-206ENST00000549336 OLFM4Q6UX06 510 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms