RNA–Protein interactions for RNA: ENST00000549044.5

BRF1-214, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-214ENST00000549044 COA1Q9GZY4 146 aa23.31■■□□□ 1.32
BRF1-214ENST00000549044 RCAN3Q9UKA8 241 aa23.31■■□□□ 1.32
BRF1-214ENST00000549044 C15orf52Q6ZUT6 534 aaKnown RBP23.3■■□□□ 1.32
BRF1-214ENST00000549044 PNMA8AQ86V59 439 aaPredicted RBP23.3■■□□□ 1.32
BRF1-214ENST00000549044 MICALL2Q8IY33 904 aa23.3■■□□□ 1.32
BRF1-214ENST00000549044 VGLL2Q8N8G2 317 aa23.3■■□□□ 1.32
BRF1-214ENST00000549044 TRPM4Q8TD43 1214 aa23.3■■□□□ 1.32
BRF1-214ENST00000549044 PANK1Q8TE04 598 aa23.3■■□□□ 1.32
BRF1-214ENST00000549044 ADARB2Q9NS39 739 aaKnown RBP23.3■■□□□ 1.32
BRF1-214ENST00000549044 PA2G4Q9UQ80 394 aaKnown RBP23.3■■□□□ 1.32
BRF1-214ENST00000549044 CLEC11AQ9Y240 323 aa23.3■■□□□ 1.32
BRF1-214ENST00000549044 HIRAP54198 1017 aaPredicted RBP23.29■■□□□ 1.32
BRF1-214ENST00000549044 HTRA3P83110 453 aa23.29■■□□□ 1.32
BRF1-214ENST00000549044 MAP1SQ66K74 1059 aaPredicted RBP23.29■■□□□ 1.32
BRF1-214ENST00000549044 FTSJ3Q8IY81 847 aaKnown RBP23.29■■□□□ 1.32
BRF1-214ENST00000549044 DPF2Q92785 391 aa23.29■■□□□ 1.32
BRF1-214ENST00000549044 YTHDC1Q96MU7 727 aaKnown RBP23.29■■□□□ 1.32
BRF1-214ENST00000549044 MROH5Q6ZUA9 1318 aa23.29■■□□□ 1.32
BRF1-214ENST00000549044 USP17L3A6NCW0 530 aa23.28■■□□□ 1.32
BRF1-214ENST00000549044 USP17L4A6NCW7 530 aa23.28■■□□□ 1.32
BRF1-214ENST00000549044 EGFRP00533 1210 aa23.28■■□□□ 1.32
BRF1-214ENST00000549044 METTL24Q5JXM2 366 aa23.28■■□□□ 1.32
BRF1-214ENST00000549044 RSBN1LQ6PCB5 846 aaPredicted RBP23.28■■□□□ 1.32
BRF1-214ENST00000549044 USP17L1Q7RTZ2 530 aa23.28■■□□□ 1.32
BRF1-214ENST00000549044 ATG9AQ7Z3C6 839 aa23.28■■□□□ 1.32
BRF1-214ENST00000549044 GMLQ99445 158 aa23.28■■□□□ 1.32
BRF1-214ENST00000549044 SIL1Q9H173 461 aa23.28■■□□□ 1.32
BRF1-214ENST00000549044 CD209Q9NNX6 404 aa23.28■■□□□ 1.32
BRF1-214ENST00000549044 EYA2O00167 538 aa23.27■■□□□ 1.32
BRF1-214ENST00000549044 UBE4AQ14139 1066 aa23.27■■□□□ 1.32
BRF1-214ENST00000549044 DACT2Q5SW24 774 aa23.27■■□□□ 1.32
BRF1-214ENST00000549044 USP50Q70EL3 339 aaPredicted RBP23.27■■□□□ 1.32
BRF1-214ENST00000549044 SAMD7Q7Z3H4 446 aa23.27■■□□□ 1.32
BRF1-214ENST00000549044 ITPRIPQ8IWB1 547 aa23.27■■□□□ 1.32
BRF1-214ENST00000549044 ZNF646O15015 1829 aaPredicted RBP23.26■■□□□ 1.31
BRF1-214ENST00000549044 ITGBL1O95965 494 aaPredicted RBP23.26■■□□□ 1.31
BRF1-214ENST00000549044 GNAI2P04899 355 aa23.26■■□□□ 1.31
BRF1-214ENST00000549044 RPS12P25398 132 aaKnown RBP23.26■■□□□ 1.31
BRF1-214ENST00000549044 HDAC5Q9UQL6 1122 aa23.26■■□□□ 1.31
BRF1-214ENST00000549044 PSME4Q14997 1843 aa23.25■■□□□ 1.31
BRF1-214ENST00000549044 H7C1D1 291 aa23.25■■□□□ 1.31
BRF1-214ENST00000549044 ZBTB7BO15156 539 aaPredicted RBP23.25■■□□□ 1.31
BRF1-214ENST00000549044 PDE8BO95263 885 aa23.25■■□□□ 1.31
BRF1-214ENST00000549044 GYG1P46976 350 aa23.25■■□□□ 1.31
BRF1-214ENST00000549044 MTX1Q13505 466 aa23.25■■□□□ 1.31
BRF1-214ENST00000549044 TBC1D10BQ4KMP7 808 aaPredicted RBP23.25■■□□□ 1.31
BRF1-214ENST00000549044 FBXW7Q969H0 707 aa23.25■■□□□ 1.31
BRF1-214ENST00000549044 C1orf115Q9H7X2 142 aa23.25■■□□□ 1.31
BRF1-214ENST00000549044 PNMA6EA0A0J9YXQ4 647 aa23.24■■□□□ 1.31
BRF1-214ENST00000549044 GTF2IP78347 998 aa23.24■■□□□ 1.31
BRF1-214ENST00000549044 FMR1Q06787 632 aaKnown RBP eCLIP23.24■■□□□ 1.31
BRF1-214ENST00000549044 IFFO2Q5TF58 517 aa23.24■■□□□ 1.31
BRF1-214ENST00000549044 CNTROBQ8N137 903 aa23.24■■□□□ 1.31
BRF1-214ENST00000549044 FAM84BQ96KN1 310 aaPredicted RBP23.24■■□□□ 1.31
BRF1-214ENST00000549044 ZNF609O15014 1411 aa23.24■■□□□ 1.31
BRF1-214ENST00000549044 SRGAP3O43295 1099 aa23.23■■□□□ 1.31
BRF1-214ENST00000549044 IL1R1P14778 569 aa23.23■■□□□ 1.31
BRF1-214ENST00000549044 FGFR2P21802 821 aa23.23■■□□□ 1.31
BRF1-214ENST00000549044 APLP1P51693 650 aa23.23■■□□□ 1.31
BRF1-214ENST00000549044 RBM26Q5T8P6 1007 aaKnown RBP23.23■■□□□ 1.31
BRF1-214ENST00000549044 STRIP1Q5VSL9 837 aa23.23■■□□□ 1.31
BRF1-214ENST00000549044 TTLL5Q6EMB2 1281 aa23.23■■□□□ 1.31
BRF1-214ENST00000549044 ZNF804AQ7Z570 1209 aa23.23■■□□□ 1.31
BRF1-214ENST00000549044 AGBL3Q8NEM8 1001 aa23.23■■□□□ 1.31
BRF1-214ENST00000549044 PASKQ96RG2 1323 aa23.23■■□□□ 1.31
BRF1-214ENST00000549044 CIAO1O76071 339 aa23.22■■□□□ 1.31
BRF1-214ENST00000549044 COPRSQ9NQ92 184 aa23.22■■□□□ 1.31
BRF1-214ENST00000549044 JAG2Q9Y219 1238 aa23.22■■□□□ 1.31
BRF1-214ENST00000549044 ZNF280AP59817 542 aaPredicted RBP23.21■■□□□ 1.31
BRF1-214ENST00000549044 CERS5Q8N5B7 392 aa23.21■■□□□ 1.31
BRF1-214ENST00000549044 PGAP2Q9UHJ9 254 aa23.21■■□□□ 1.31
BRF1-214ENST00000549044 ASTN2O75129 1339 aaPredicted RBP23.2■■□□□ 1.3
BRF1-214ENST00000549044 FBXO33Q7Z6M2 555 aa23.2■■□□□ 1.3
BRF1-214ENST00000549044 TRAF5O00463 557 aa23.19■■□□□ 1.3
BRF1-214ENST00000549044 USP17L8P0C7I0 530 aa23.19■■□□□ 1.3
BRF1-214ENST00000549044 HIBADHP31937 336 aaKnown RBP23.19■■□□□ 1.3
BRF1-214ENST00000549044 PUM3Q15397 648 aaKnown RBP23.19■■□□□ 1.3
BRF1-214ENST00000549044 C20orf194Q5TEA3 1177 aa23.19■■□□□ 1.3
BRF1-214ENST00000549044 TDRD7Q8NHU6 1098 aaKnown RBP23.19■■□□□ 1.3
BRF1-214ENST00000549044 FBXO3Q9UK99 471 aa23.19■■□□□ 1.3
BRF1-214ENST00000549044 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.19■■□□□ 1.3
BRF1-214ENST00000549044 BCAMP50895 628 aa23.18■■□□□ 1.3
BRF1-214ENST00000549044 KIF4BQ2VIQ3 1234 aa23.18■■□□□ 1.3
BRF1-214ENST00000549044 IQSEC3Q9UPP2 1182 aaPredicted RBP23.18■■□□□ 1.3
BRF1-214ENST00000549044 COG6Q9Y2V7 657 aa23.18■■□□□ 1.3
BRF1-214ENST00000549044 IL15P40933 162 aaPredicted RBP23.17■■□□□ 1.3
BRF1-214ENST00000549044 DLK2Q6UY11 383 aa23.17■■□□□ 1.3
BRF1-214ENST00000549044 KIAA0825Q8IV33 1275 aa23.17■■□□□ 1.3
BRF1-214ENST00000549044 DNAJC5GQ8N7S2 189 aa23.17■■□□□ 1.3
BRF1-214ENST00000549044 GLIS2Q9BZE0 524 aaPredicted RBP23.17■■□□□ 1.3
BRF1-214ENST00000549044 CEP126Q9P2H0 1117 aa23.17■■□□□ 1.3
BRF1-214ENST00000549044 ATP8B2P98198 1209 aa23.16■■□□□ 1.3
BRF1-214ENST00000549044 POLA2Q14181 598 aa23.16■■□□□ 1.3
BRF1-214ENST00000549044 ZC3H15Q8WU90 426 aaKnown RBP23.16■■□□□ 1.3
BRF1-214ENST00000549044 MYOZ2Q9NPC6 264 aa23.16■■□□□ 1.3
BRF1-214ENST00000549044 SASH1O94885 1247 aa23.15■■□□□ 1.3
BRF1-214ENST00000549044 IFIT1P09914 478 aaKnown RBP23.15■■□□□ 1.3
BRF1-214ENST00000549044 MVPQ14764 893 aaKnown RBP23.15■■□□□ 1.3
BRF1-214ENST00000549044 LPIN2Q92539 896 aa23.15■■□□□ 1.3
BRF1-214ENST00000549044 CEP350Q5VT06 3117 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms