RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 TNNI3KQ59H18 835 aa26.01■■□□□ 1.75
CACNB3-210ENST00000548874 TXNRD3Q86VQ6 643 aa26.01■■□□□ 1.75
CACNB3-210ENST00000548874 ARAP2Q8WZ64 1704 aa26.01■■□□□ 1.75
CACNB3-210ENST00000548874 LRRCC1Q9C099 1032 aa26.01■■□□□ 1.75
CACNB3-210ENST00000548874 FPGT-TNNI3KV9GXZ4 949 aa26.01■■□□□ 1.75
CACNB3-210ENST00000548874 COL4A5P29400 1685 aa26■■□□□ 1.75
CACNB3-210ENST00000548874 A0A1B0GUL7 405 aa26■■□□□ 1.75
CACNB3-210ENST00000548874 PPIP5K2O43314 1243 aa26■■□□□ 1.75
CACNB3-210ENST00000548874 IFIT1P09914 478 aaKnown RBP26■■□□□ 1.75
CACNB3-210ENST00000548874 SLC5A1P13866 664 aa26■■□□□ 1.75
CACNB3-210ENST00000548874 AOC3Q16853 763 aa26■■□□□ 1.75
CACNB3-210ENST00000548874 ZC3H12CQ9C0D7 883 aaKnown RBP26■■□□□ 1.75
CACNB3-210ENST00000548874 IL1RAPL2Q9NP60 686 aa25.99■■□□□ 1.75
CACNB3-210ENST00000548874 RIMBP2O15034 1052 aa25.98■■□□□ 1.75
CACNB3-210ENST00000548874 TIMM10P62072 90 aa25.98■■□□□ 1.75
CACNB3-210ENST00000548874 EAF2Q96CJ1 260 aaPredicted RBP25.98■■□□□ 1.75
CACNB3-210ENST00000548874 LARGE2Q8N3Y3 721 aa25.97■■□□□ 1.75
CACNB3-210ENST00000548874 FAM84BQ96KN1 310 aaPredicted RBP25.97■■□□□ 1.75
CACNB3-210ENST00000548874 CCDC88AQ3V6T2 1871 aa25.97■■□□□ 1.75
CACNB3-210ENST00000548874 KDM2BQ8NHM5 1336 aa25.96■■□□□ 1.75
CACNB3-210ENST00000548874 CLASRPQ8N2M8 674 aaKnown RBP25.96■■□□□ 1.75
CACNB3-210ENST00000548874 PPP4R2Q9NY27 417 aa25.96■■□□□ 1.75
CACNB3-210ENST00000548874 DICER1Q9UPY3 1922 aaKnown RBP25.96■■□□□ 1.75
CACNB3-210ENST00000548874 SMARCA5O60264 1052 aaPredicted RBP25.95■■□□□ 1.74
CACNB3-210ENST00000548874 ADORA1P30542 326 aa25.95■■□□□ 1.74
CACNB3-210ENST00000548874 GYG1P46976 350 aa25.95■■□□□ 1.74
CACNB3-210ENST00000548874 FBXO33Q7Z6M2 555 aa25.95■■□□□ 1.74
CACNB3-210ENST00000548874 XAGE2Q96GT9 111 aa25.95■■□□□ 1.74
CACNB3-210ENST00000548874 C9orf131Q5VYM1 1079 aa25.94■■□□□ 1.74
CACNB3-210ENST00000548874 AACSQ86V21 672 aa25.94■■□□□ 1.74
CACNB3-210ENST00000548874 CCDC136Q96JN2 1154 aa25.94■■□□□ 1.74
CACNB3-210ENST00000548874 NEUROD6Q96NK8 337 aa25.94■■□□□ 1.74
CACNB3-210ENST00000548874 COA1Q9GZY4 146 aa25.94■■□□□ 1.74
CACNB3-210ENST00000548874 RNF181Q9P0P0 153 aa25.94■■□□□ 1.74
CACNB3-210ENST00000548874 HIBADHP31937 336 aaKnown RBP25.93■■□□□ 1.74
CACNB3-210ENST00000548874 DOK7Q18PE1 504 aa25.93■■□□□ 1.74
CACNB3-210ENST00000548874 CAVIN4Q5BKX8 364 aa25.93■■□□□ 1.74
CACNB3-210ENST00000548874 ANKRD45Q5TZF3 282 aa25.93■■□□□ 1.74
CACNB3-210ENST00000548874 ZNF804AQ7Z570 1209 aa25.93■■□□□ 1.74
CACNB3-210ENST00000548874 NIM1KQ8IY84 436 aa25.93■■□□□ 1.74
CACNB3-210ENST00000548874 DBNDD2Q9BQY9 259 aa25.93■■□□□ 1.74
CACNB3-210ENST00000548874 DBNLQ9UJU6 430 aaKnown RBP25.93■■□□□ 1.74
CACNB3-210ENST00000548874 BCAMP50895 628 aa25.92■■□□□ 1.74
CACNB3-210ENST00000548874 JDP2Q8WYK2 163 aa25.92■■□□□ 1.74
CACNB3-210ENST00000548874 CCDC8Q9H0W5 538 aaPredicted RBP25.92■■□□□ 1.74
CACNB3-210ENST00000548874 DBNDD1Q9H9R9 158 aa25.92■■□□□ 1.74
CACNB3-210ENST00000548874 CD209Q9NNX6 404 aa25.92■■□□□ 1.74
CACNB3-210ENST00000548874 TLR7Q9NYK1 1049 aaKnown RBP25.92■■□□□ 1.74
CACNB3-210ENST00000548874 ZBTB22O15209 634 aa25.91■■□□□ 1.74
CACNB3-210ENST00000548874 ECE2O60344 883 aa25.91■■□□□ 1.74
CACNB3-210ENST00000548874 IL1R1P14778 569 aa25.91■■□□□ 1.74
CACNB3-210ENST00000548874 NUCB1Q02818 461 aa25.91■■□□□ 1.74
CACNB3-210ENST00000548874 PODNQ7Z5L7 613 aa25.91■■□□□ 1.74
CACNB3-210ENST00000548874 ZNRF3Q9ULT6 936 aa25.91■■□□□ 1.74
CACNB3-210ENST00000548874 TIAM2Q8IVF5 1701 aa25.91■■□□□ 1.74
CACNB3-210ENST00000548874 YDJCA8MPS7 323 aa25.9■■□□□ 1.74
CACNB3-210ENST00000548874 FZD9O00144 591 aa25.9■■□□□ 1.74
CACNB3-210ENST00000548874 PHKA1P46020 1223 aa25.9■■□□□ 1.74
CACNB3-210ENST00000548874 CCDC102BQ68D86 513 aa25.9■■□□□ 1.74
CACNB3-210ENST00000548874 CENPQQ7L2Z9 268 aaPredicted RBP25.9■■□□□ 1.74
CACNB3-210ENST00000548874 IFIT2P09913 472 aaKnown RBP25.89■■□□□ 1.74
CACNB3-210ENST00000548874 B4GALNT3Q6L9W6 998 aa25.89■■□□□ 1.74
CACNB3-210ENST00000548874 TDRD7Q8NHU6 1098 aaKnown RBP25.89■■□□□ 1.74
CACNB3-210ENST00000548874 G3V3G9 751 aa25.88■■□□□ 1.73
CACNB3-210ENST00000548874 DCAF8Q5TAQ9 597 aa25.88■■□□□ 1.73
CACNB3-210ENST00000548874 CHD1LQ86WJ1 897 aa25.88■■□□□ 1.73
CACNB3-210ENST00000548874 VPS37DQ86XT2 251 aa25.88■■□□□ 1.73
CACNB3-210ENST00000548874 UTRNP46939 3433 aa25.88■■□□□ 1.73
CACNB3-210ENST00000548874 ZC3H4Q9UPT8 1303 aaKnown RBP25.88■■□□□ 1.73
CACNB3-210ENST00000548874 SCN9AQ15858 1988 aa25.87■■□□□ 1.73
CACNB3-210ENST00000548874 CHD4Q14839 1912 aa25.87■■□□□ 1.73
CACNB3-210ENST00000548874 GORABQ5T7V8 394 aa25.87■■□□□ 1.73
CACNB3-210ENST00000548874 ZBTB47Q9UFB7 747 aaPredicted RBP25.87■■□□□ 1.73
CACNB3-210ENST00000548874 C16orf71Q8IYS4 520 aaPredicted RBP25.86■■□□□ 1.73
CACNB3-210ENST00000548874 ZNF512BQ96KM6 892 aaPredicted RBP25.86■■□□□ 1.73
CACNB3-210ENST00000548874 LNPKQ9C0E8 428 aa25.86■■□□□ 1.73
CACNB3-210ENST00000548874 SALL3Q9BXA9 1300 aa25.86■■□□□ 1.73
CACNB3-210ENST00000548874 ARID4AP29374 1257 aaPredicted RBP25.85■■□□□ 1.73
CACNB3-210ENST00000548874 CCDC158Q5M9N0 1113 aa25.85■■□□□ 1.73
CACNB3-210ENST00000548874 BCL11AQ9H165 835 aa25.85■■□□□ 1.73
CACNB3-210ENST00000548874 KCNQ5Q9NR82 932 aa25.85■■□□□ 1.73
CACNB3-210ENST00000548874 GNL3LQ9NVN8 582 aaKnown RBP25.85■■□□□ 1.73
CACNB3-210ENST00000548874 ZNF646O15015 1829 aaPredicted RBP25.84■■□□□ 1.73
CACNB3-210ENST00000548874 PSME4Q14997 1843 aa25.84■■□□□ 1.73
CACNB3-210ENST00000548874 SEMA3EO15041 775 aa25.84■■□□□ 1.73
CACNB3-210ENST00000548874 CXCL9Q07325 125 aa25.84■■□□□ 1.73
CACNB3-210ENST00000548874 OTUD7AQ8TE49 926 aaPredicted RBP25.84■■□□□ 1.73
CACNB3-210ENST00000548874 COL1A1P02452 1464 aaPredicted RBP25.84■■□□□ 1.73
CACNB3-210ENST00000548874 ZNF541Q9H0D2 1346 aa25.84■■□□□ 1.73
CACNB3-210ENST00000548874 UQCRFS1P1P0C7P4 283 aa25.83■■□□□ 1.73
CACNB3-210ENST00000548874 IQSEC3Q9UPP2 1182 aaPredicted RBP25.83■■□□□ 1.73
CACNB3-210ENST00000548874 FAM205AQ6ZU69 1335 aa25.83■■□□□ 1.73
CACNB3-210ENST00000548874 EIF6P56537 245 aaKnown RBP25.82■■□□□ 1.72
CACNB3-210ENST00000548874 RASGRF1Q13972 1273 aa25.82■■□□□ 1.72
CACNB3-210ENST00000548874 TTC39AQ5SRH9 613 aa25.82■■□□□ 1.72
CACNB3-210ENST00000548874 PDS5AQ29RF7 1337 aaKnown RBP25.82■■□□□ 1.72
CACNB3-210ENST00000548874 USP17L3A6NCW0 530 aa25.81■■□□□ 1.72
CACNB3-210ENST00000548874 USP17L4A6NCW7 530 aa25.81■■□□□ 1.72
CACNB3-210ENST00000548874 RAD17O75943 681 aa25.81■■□□□ 1.72
CACNB3-210ENST00000548874 STRIP1Q5VSL9 837 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms