RNA–Protein interactions for RNA: ENST00000548229.2

SVOP-202, Transcript of SV2 related protein, humanhuman

TSL 2

Gene SVOP, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-202ENST00000548229 DUSP27Q5VZP5 1158 aa20.49■□□□□ 0.87
SVOP-202ENST00000548229 APOBEC3FQ8IUX4 373 aaKnown RBP20.49■□□□□ 0.87
SVOP-202ENST00000548229 CHMP4AQ9BY43 222 aa20.49■□□□□ 0.87
SVOP-202ENST00000548229 CWC25Q9NXE8 425 aaPredicted RBP20.49■□□□□ 0.87
SVOP-202ENST00000548229 MED23Q9ULK4 1368 aa20.48■□□□□ 0.87
SVOP-202ENST00000548229 DACT2Q5SW24 774 aa20.48■□□□□ 0.87
SVOP-202ENST00000548229 SCAF8Q9UPN6 1271 aaKnown RBP20.48■□□□□ 0.87
SVOP-202ENST00000548229 MANSC4A6NHS7 340 aaPredicted RBP20.47■□□□□ 0.87
SVOP-202ENST00000548229 RALBP1Q15311 655 aa20.47■□□□□ 0.87
SVOP-202ENST00000548229 LDLRAD1Q5T700 205 aa20.47■□□□□ 0.87
SVOP-202ENST00000548229 SPRYD7Q5W111 196 aa20.47■□□□□ 0.87
SVOP-202ENST00000548229 MYD88Q99836 296 aa20.47■□□□□ 0.87
SVOP-202ENST00000548229 COA1Q9GZY4 146 aa20.47■□□□□ 0.87
SVOP-202ENST00000548229 BSDC1Q9NW68 430 aaPredicted RBP20.46■□□□□ 0.87
SVOP-202ENST00000548229 TRIM35Q9UPQ4 493 aa20.46■□□□□ 0.87
SVOP-202ENST00000548229 TRIM17Q9Y577 477 aa20.46■□□□□ 0.87
SVOP-202ENST00000548229 DDX58O95786 925 aaKnown RBP20.45■□□□□ 0.86
SVOP-202ENST00000548229 FBXW7Q969H0 707 aa20.45■□□□□ 0.86
SVOP-202ENST00000548229 RUNDC1Q96C34 613 aa20.45■□□□□ 0.86
SVOP-202ENST00000548229 SLC10A4Q96EP9 437 aa20.45■□□□□ 0.86
SVOP-202ENST00000548229 CCDC85AQ96PX6 553 aaPredicted RBP20.45■□□□□ 0.86
SVOP-202ENST00000548229 UNCXA6NJT0 531 aa20.44■□□□□ 0.86
SVOP-202ENST00000548229 ZBTB48P10074 688 aaPredicted RBP20.44■□□□□ 0.86
SVOP-202ENST00000548229 OTUD7BQ6GQQ9 843 aa20.44■□□□□ 0.86
SVOP-202ENST00000548229 R3HDMLQ9H3Y0 253 aa20.44■□□□□ 0.86
SVOP-202ENST00000548229 ANGEL1Q9UNK9 670 aaKnown RBP20.44■□□□□ 0.86
SVOP-202ENST00000548229 MINPP1Q9UNW1 487 aa20.44■□□□□ 0.86
SVOP-202ENST00000548229 BRCA2P51587 3418 aa20.43■□□□□ 0.86
SVOP-202ENST00000548229 PPP1R12BO60237 982 aaPredicted RBP20.43■□□□□ 0.86
SVOP-202ENST00000548229 CCT4P50991 539 aaKnown RBP20.43■□□□□ 0.86
SVOP-202ENST00000548229 TTLL5Q6EMB2 1281 aa20.43■□□□□ 0.86
SVOP-202ENST00000548229 OTOP1Q7RTM1 612 aa20.43■□□□□ 0.86
SVOP-202ENST00000548229 IFNL1Q8IU54 200 aa20.43■□□□□ 0.86
SVOP-202ENST00000548229 ERO1AQ96HE7 468 aa20.43■□□□□ 0.86
SVOP-202ENST00000548229 LEMD3Q9Y2U8 911 aa20.43■□□□□ 0.86
SVOP-202ENST00000548229 COL1A1P02452 1464 aaPredicted RBP20.43■□□□□ 0.86
SVOP-202ENST00000548229 SASH1O94885 1247 aa20.42■□□□□ 0.86
SVOP-202ENST00000548229 CTSWP56202 376 aa20.42■□□□□ 0.86
SVOP-202ENST00000548229 PRKG1Q13976 671 aa20.42■□□□□ 0.86
SVOP-202ENST00000548229 CCDC146Q8IYE0 955 aa20.42■□□□□ 0.86
SVOP-202ENST00000548229 METTL22Q9BUU2 404 aaPredicted RBP20.42■□□□□ 0.86
SVOP-202ENST00000548229 PHAXQ9H814 394 aaKnown RBP20.42■□□□□ 0.86
SVOP-202ENST00000548229 KIAA0100Q14667 2235 aaKnown RBP20.42■□□□□ 0.86
SVOP-202ENST00000548229 MAP3K11Q16584 847 aa20.41■□□□□ 0.86
SVOP-202ENST00000548229 MXD3Q9BW11 206 aa20.41■□□□□ 0.86
SVOP-202ENST00000548229 POTEFA5A3E0 1075 aa20.4■□□□□ 0.86
SVOP-202ENST00000548229 WDR43Q15061 677 aaKnown RBP eCLIP20.4■□□□□ 0.86
SVOP-202ENST00000548229 TTLL11Q8NHH1 800 aa20.4■□□□□ 0.86
SVOP-202ENST00000548229 DEFB129Q9H1M3 183 aa20.4■□□□□ 0.86
SVOP-202ENST00000548229 MBIPQ9NS73 344 aa20.4■□□□□ 0.86
SVOP-202ENST00000548229 PPP2R3BQ9Y5P8 575 aa20.4■□□□□ 0.86
SVOP-202ENST00000548229 CALD1Q05682 793 aaKnown RBP20.39■□□□□ 0.85
SVOP-202ENST00000548229 SUPT20HL1Q3ZLR7 823 aa20.39■□□□□ 0.85
SVOP-202ENST00000548229 KIAA0825Q8IV33 1275 aa20.39■□□□□ 0.85
SVOP-202ENST00000548229 JARID2Q92833 1246 aaPredicted RBP20.39■□□□□ 0.85
SVOP-202ENST00000548229 ZBED3Q96IU2 234 aaPredicted RBP20.39■□□□□ 0.85
SVOP-202ENST00000548229 ANKRD2Q9GZV1 360 aa20.39■□□□□ 0.85
SVOP-202ENST00000548229 PTPN22Q9Y2R2 807 aa20.39■□□□□ 0.85
SVOP-202ENST00000548229 IGHMBP2P38935 993 aaKnown RBP20.38■□□□□ 0.85
SVOP-202ENST00000548229 ARHGEF6Q15052 776 aa20.38■□□□□ 0.85
SVOP-202ENST00000548229 DLGAP5Q15398 846 aa20.38■□□□□ 0.85
SVOP-202ENST00000548229 ARMC5Q96C12 935 aa20.38■□□□□ 0.85
SVOP-202ENST00000548229 WNK4Q96J92 1243 aa20.38■□□□□ 0.85
SVOP-202ENST00000548229 TMEM106CQ9BVX2 250 aa20.38■□□□□ 0.85
SVOP-202ENST00000548229 WTIPA6NIX2 430 aaPredicted RBP20.37■□□□□ 0.85
SVOP-202ENST00000548229 MYO1BO43795 1136 aa20.37■□□□□ 0.85
SVOP-202ENST00000548229 NEXNQ0ZGT2 675 aa20.37■□□□□ 0.85
SVOP-202ENST00000548229 GREM2Q9H772 168 aa20.37■□□□□ 0.85
SVOP-202ENST00000548229 EFCC1Q9HA90 598 aa20.37■□□□□ 0.85
SVOP-202ENST00000548229 ZNF804BA4D1E1 1349 aa20.36■□□□□ 0.85
SVOP-202ENST00000548229 ZNF853P0CG23 659 aa20.36■□□□□ 0.85
SVOP-202ENST00000548229 GNAI1P63096 354 aa20.36■□□□□ 0.85
SVOP-202ENST00000548229 CCDC30Q5VVM6 783 aa20.36■□□□□ 0.85
SVOP-202ENST00000548229 MTMR14Q8NCE2 650 aa20.36■□□□□ 0.85
SVOP-202ENST00000548229 IFT57Q9NWB7 429 aa20.36■□□□□ 0.85
SVOP-202ENST00000548229 IGF2BP3O00425 579 aaKnown RBP eCLIP20.35■□□□□ 0.85
SVOP-202ENST00000548229 IREB2P48200 963 aaKnown RBP20.35■□□□□ 0.85
SVOP-202ENST00000548229 GTF2IP78347 998 aa20.35■□□□□ 0.85
SVOP-202ENST00000548229 SP3Q02447 781 aa20.35■□□□□ 0.85
SVOP-202ENST00000548229 NBPF11Q86T75 865 aa20.35■□□□□ 0.85
SVOP-202ENST00000548229 MAP3K2Q9Y2U5 619 aa20.35■□□□□ 0.85
SVOP-202ENST00000548229 KCNJ4P48050 445 aa20.34■□□□□ 0.85
SVOP-202ENST00000548229 FXR1P51114 621 aaKnown RBP eCLIP20.34■□□□□ 0.85
SVOP-202ENST00000548229 KSR2Q6VAB6 950 aa20.34■□□□□ 0.85
SVOP-202ENST00000548229 TXNRD3Q86VQ6 643 aa20.34■□□□□ 0.85
SVOP-202ENST00000548229 MPHOSPH8Q99549 860 aa20.34■□□□□ 0.85
SVOP-202ENST00000548229 RBBP6Q7Z6E9 1792 aaKnown RBP20.34■□□□□ 0.85
SVOP-202ENST00000548229 MYBBP1AQ9BQG0 1328 aaKnown RBP20.33■□□□□ 0.85
SVOP-202ENST00000548229 ELL2O00472 640 aaPredicted RBP20.33■□□□□ 0.85
SVOP-202ENST00000548229 EN2P19622 333 aaPredicted RBP20.33■□□□□ 0.85
SVOP-202ENST00000548229 CRHR2Q13324 411 aa20.33■□□□□ 0.85
SVOP-202ENST00000548229 CD99L2Q8TCZ2 262 aa20.33■□□□□ 0.85
SVOP-202ENST00000548229 CLMNQ96JQ2 1002 aa20.33■□□□□ 0.85
SVOP-202ENST00000548229 ANKRD13AQ8IZ07 590 aa20.32■□□□□ 0.84
SVOP-202ENST00000548229 CEP290O15078 2479 aa20.31■□□□□ 0.84
SVOP-202ENST00000548229 TESPA1A2RU30 521 aaPredicted RBP20.31■□□□□ 0.84
SVOP-202ENST00000548229 IGKV5-2P06315 115 aa20.31■□□□□ 0.84
SVOP-202ENST00000548229 CD209Q9NNX6 404 aa20.31■□□□□ 0.84
SVOP-202ENST00000548229 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.31■□□□□ 0.84
SVOP-202ENST00000548229 FZD1Q9UP38 647 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms