RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 POLLQ9UGP5 575 aa12.19□□□□□ -0.46
CDK4-205ENST00000547853 SH3TC1Q8TE82 1336 aa12.18□□□□□ -0.46
CDK4-205ENST00000547853 RIMBP2O15034 1052 aa12.18□□□□□ -0.46
CDK4-205ENST00000547853 FKTNO75072 461 aa12.18□□□□□ -0.46
CDK4-205ENST00000547853 VIL1P09327 827 aaKnown RBP12.18□□□□□ -0.46
CDK4-205ENST00000547853 GPSM2P81274 684 aa12.18□□□□□ -0.46
CDK4-205ENST00000547853 PDIA6Q15084 440 aa12.18□□□□□ -0.46
CDK4-205ENST00000547853 PROSER3Q2NL68 480 aa12.18□□□□□ -0.46
CDK4-205ENST00000547853 PNNQ9H307 717 aaKnown RBP12.18□□□□□ -0.46
CDK4-205ENST00000547853 SPINK5Q9NQ38 1064 aaPredicted RBP12.18□□□□□ -0.46
CDK4-205ENST00000547853 IL16Q14005 1332 aa12.17□□□□□ -0.46
CDK4-205ENST00000547853 ZSWIM8A7E2V4 1837 aa12.17□□□□□ -0.46
CDK4-205ENST00000547853 UBE2Q2LH0YL09 131 aa12.17□□□□□ -0.46
CDK4-205ENST00000547853 SCARF1Q14162 830 aa12.17□□□□□ -0.46
CDK4-205ENST00000547853 DOK7Q18PE1 504 aa12.17□□□□□ -0.46
CDK4-205ENST00000547853 L1TD1Q5T7N2 865 aaKnown RBP12.17□□□□□ -0.46
CDK4-205ENST00000547853 CELF1Q92879 486 aaKnown RBP12.17□□□□□ -0.46
CDK4-205ENST00000547853 THUMPD2Q9BTF0 503 aaKnown RBP12.17□□□□□ -0.46
CDK4-205ENST00000547853 COLQQ9Y215 455 aaPredicted RBP12.17□□□□□ -0.46
CDK4-205ENST00000547853 LAMA3Q16787 3333 aa12.17□□□□□ -0.46
CDK4-205ENST00000547853 EIF5BO60841 1220 aaKnown RBP12.16□□□□□ -0.46
CDK4-205ENST00000547853 U2AF1L5P0DN76 240 aaPredicted RBP12.16□□□□□ -0.46
CDK4-205ENST00000547853 U2AF1Q01081 240 aaKnown RBP eCLIP12.16□□□□□ -0.46
CDK4-205ENST00000547853 SREBF2Q12772 1141 aa12.16□□□□□ -0.46
CDK4-205ENST00000547853 MKRN3Q13064 507 aaKnown RBP12.16□□□□□ -0.46
CDK4-205ENST00000547853 INTS3Q68E01 1043 aaKnown RBP12.16□□□□□ -0.46
CDK4-205ENST00000547853 OTOP1Q7RTM1 612 aa12.16□□□□□ -0.46
CDK4-205ENST00000547853 NSFL1CQ9UNZ2 370 aaKnown RBP12.16□□□□□ -0.46
CDK4-205ENST00000547853 SCAF8Q9UPN6 1271 aaKnown RBP12.16□□□□□ -0.46
CDK4-205ENST00000547853 MYH3P11055 1940 aa12.15□□□□□ -0.46
CDK4-205ENST00000547853 SSC5DA1L4H1 1573 aa12.15□□□□□ -0.46
CDK4-205ENST00000547853 C6orf229H3BNL8 230 aa12.15□□□□□ -0.46
CDK4-205ENST00000547853 IGHDP01880 384 aa12.15□□□□□ -0.46
CDK4-205ENST00000547853 ANXA1P04083 346 aa12.15□□□□□ -0.46
CDK4-205ENST00000547853 TBC1D16Q8TBP0 767 aa12.15□□□□□ -0.46
CDK4-205ENST00000547853 ARMC5Q96C12 935 aa12.15□□□□□ -0.46
CDK4-205ENST00000547853 GMLQ99445 158 aa12.15□□□□□ -0.46
CDK4-205ENST00000547853 CHMP4BQ9H444 224 aaKnown RBP12.15□□□□□ -0.46
CDK4-205ENST00000547853 TRIM17Q9Y577 477 aa12.15□□□□□ -0.46
CDK4-205ENST00000547853 HSP90AB3PQ58FF7 597 aa12.14□□□□□ -0.47
CDK4-205ENST00000547853 ZKSCAN2Q63HK3 967 aa12.14□□□□□ -0.47
CDK4-205ENST00000547853 RSBN1LQ6PCB5 846 aaPredicted RBP12.14□□□□□ -0.47
CDK4-205ENST00000547853 AGBL3Q8NEM8 1001 aa12.14□□□□□ -0.47
CDK4-205ENST00000547853 FRAT1Q92837 279 aaPredicted RBP12.14□□□□□ -0.47
CDK4-205ENST00000547853 ZNF428Q96B54 188 aa12.14□□□□□ -0.47
CDK4-205ENST00000547853 TBC1D32Q96NH3 1257 aa12.14□□□□□ -0.47
CDK4-205ENST00000547853 EYA3Q99504 573 aa12.14□□□□□ -0.47
CDK4-205ENST00000547853 MYOZ2Q9NPC6 264 aa12.14□□□□□ -0.47
CDK4-205ENST00000547853 TRMT112Q9UI30 125 aaKnown RBP12.14□□□□□ -0.47
CDK4-205ENST00000547853 COG6Q9Y2V7 657 aa12.14□□□□□ -0.47
CDK4-205ENST00000547853 EN2P19622 333 aaPredicted RBP12.13□□□□□ -0.47
CDK4-205ENST00000547853 MVPQ14764 893 aaKnown RBP12.13□□□□□ -0.47
CDK4-205ENST00000547853 PRAMEF18Q5VWM3 479 aa12.13□□□□□ -0.47
CDK4-205ENST00000547853 A0A1B0GUL6 1792 aa12.13□□□□□ -0.47
CDK4-205ENST00000547853 HDAC1Q13547 482 aaPredicted RBP12.12□□□□□ -0.47
CDK4-205ENST00000547853 SF3B3Q15393 1217 aaKnown RBP12.12□□□□□ -0.47
CDK4-205ENST00000547853 SKAP1Q86WV1 359 aa12.12□□□□□ -0.47
CDK4-205ENST00000547853 FAM43AQ8N2R8 423 aa12.12□□□□□ -0.47
CDK4-205ENST00000547853 NECTIN2Q92692 538 aa12.12□□□□□ -0.47
CDK4-205ENST00000547853 PODXL2Q9NZ53 605 aa12.12□□□□□ -0.47
CDK4-205ENST00000547853 DDX19BQ9UMR2 479 aa12.12□□□□□ -0.47
CDK4-205ENST00000547853 COL1A1P02452 1464 aaPredicted RBP12.12□□□□□ -0.47
CDK4-205ENST00000547853 UFL1O94874 794 aa12.11□□□□□ -0.47
CDK4-205ENST00000547853 USP17L8P0C7I0 530 aa12.11□□□□□ -0.47
CDK4-205ENST00000547853 CAP1Q01518 475 aa12.11□□□□□ -0.47
CDK4-205ENST00000547853 PTPN12Q05209 780 aaKnown RBP12.11□□□□□ -0.47
CDK4-205ENST00000547853 TCIRG1Q13488 830 aa12.11□□□□□ -0.47
CDK4-205ENST00000547853 TTLL12Q14166 644 aaPredicted RBP12.11□□□□□ -0.47
CDK4-205ENST00000547853 SPRYD7Q5W111 196 aa12.11□□□□□ -0.47
CDK4-205ENST00000547853 DZIP1LQ8IYY4 767 aaKnown RBP12.11□□□□□ -0.47
CDK4-205ENST00000547853 PANK1Q8TE04 598 aa12.11□□□□□ -0.47
CDK4-205ENST00000547853 OTUD5Q96G74 571 aa12.11□□□□□ -0.47
CDK4-205ENST00000547853 ISY1Q9ULR0 285 aaKnown RBP12.11□□□□□ -0.47
CDK4-205ENST00000547853 PTPN22Q9Y2R2 807 aa12.11□□□□□ -0.47
CDK4-205ENST00000547853 KIF16BQ96L93 1317 aa12.11□□□□□ -0.47
CDK4-205ENST00000547853 H0YGN5 161 aa12.1□□□□□ -0.47
CDK4-205ENST00000547853 IGF2BP3O00425 579 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDK4-205ENST00000547853 DLL1O00548 723 aa12.1□□□□□ -0.47
CDK4-205ENST00000547853 IPO8O15397 1037 aaKnown RBP12.1□□□□□ -0.47
CDK4-205ENST00000547853 FRAT2O75474 233 aaPredicted RBP12.1□□□□□ -0.47
CDK4-205ENST00000547853 ALDH1A1P00352 501 aa12.1□□□□□ -0.47
CDK4-205ENST00000547853 PTMSP20962 102 aa12.1□□□□□ -0.47
CDK4-205ENST00000547853 NBPF9Q3BBW0 867 aa12.1□□□□□ -0.47
CDK4-205ENST00000547853 COPS6Q7L5N1 327 aa12.1□□□□□ -0.47
CDK4-205ENST00000547853 FTSJ3Q8IY81 847 aaKnown RBP12.1□□□□□ -0.47
CDK4-205ENST00000547853 IL27Q8NEV9 243 aa12.1□□□□□ -0.47
CDK4-205ENST00000547853 XAGE3Q8WTP9 111 aa12.1□□□□□ -0.47
CDK4-205ENST00000547853 UNC80Q8N2C7 3258 aa12.09□□□□□ -0.47
CDK4-205ENST00000547853 SLC4A3P48751 1232 aa12.09□□□□□ -0.47
CDK4-205ENST00000547853 LDLRAD1Q5T700 205 aa12.09□□□□□ -0.47
CDK4-205ENST00000547853 IFNL1Q8IU54 200 aa12.09□□□□□ -0.47
CDK4-205ENST00000547853 CD99L2Q8TCZ2 262 aa12.09□□□□□ -0.47
CDK4-205ENST00000547853 ZNF333Q96JL9 665 aa12.09□□□□□ -0.47
CDK4-205ENST00000547853 ZC3H12CQ9C0D7 883 aaKnown RBP12.09□□□□□ -0.47
CDK4-205ENST00000547853 EIF2S2P20042 333 aaKnown RBP12.08□□□□□ -0.48
CDK4-205ENST00000547853 NF2P35240 595 aa12.08□□□□□ -0.48
CDK4-205ENST00000547853 ALDH1L2Q3SY69 923 aa12.08□□□□□ -0.48
CDK4-205ENST00000547853 FAM89AQ96GI7 184 aa12.08□□□□□ -0.48
CDK4-205ENST00000547853 ERO1AQ96HE7 468 aa12.08□□□□□ -0.48
CDK4-205ENST00000547853 ISCA1Q9BUE6 129 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms