RNA–Protein interactions for RNA: ENST00000547715.1

PTPRB-205, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-205ENST00000547715 MXD3Q9BW11 206 aa18.81■□□□□ 0.6
PTPRB-205ENST00000547715 CFHR5Q9BXR6 569 aa18.81■□□□□ 0.6
PTPRB-205ENST00000547715 TRIM35Q9UPQ4 493 aa18.81■□□□□ 0.6
PTPRB-205ENST00000547715 PCCAP05165 728 aaPredicted RBP18.8■□□□□ 0.6
PTPRB-205ENST00000547715 PTPN12Q05209 780 aaKnown RBP18.8■□□□□ 0.6
PTPRB-205ENST00000547715 PHAXQ9H814 394 aaKnown RBP18.8■□□□□ 0.6
PTPRB-205ENST00000547715 MYH3P11055 1940 aa18.79■□□□□ 0.6
PTPRB-205ENST00000547715 SASH1O94885 1247 aa18.79■□□□□ 0.6
PTPRB-205ENST00000547715 HABP4Q5JVS0 413 aaKnown RBP18.79■□□□□ 0.6
PTPRB-205ENST00000547715 DACT2Q5SW24 774 aa18.79■□□□□ 0.6
PTPRB-205ENST00000547715 ARMC9Q7Z3E5 817 aa18.79■□□□□ 0.6
PTPRB-205ENST00000547715 CCDC191Q8NCU4 936 aa18.79■□□□□ 0.6
PTPRB-205ENST00000547715 MED23Q9ULK4 1368 aa18.79■□□□□ 0.6
PTPRB-205ENST00000547715 MYO3BQ8WXR4 1341 aa18.78■□□□□ 0.6
PTPRB-205ENST00000547715 ALDH1A1P00352 501 aa18.78■□□□□ 0.6
PTPRB-205ENST00000547715 CWC25Q9NXE8 425 aaPredicted RBP18.78■□□□□ 0.6
PTPRB-205ENST00000547715 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.78■□□□□ 0.6
PTPRB-205ENST00000547715 TRIM17Q9Y577 477 aa18.78■□□□□ 0.6
PTPRB-205ENST00000547715 KIAA0100Q14667 2235 aaKnown RBP18.78■□□□□ 0.6
PTPRB-205ENST00000547715 SPRYD7Q5W111 196 aa18.77■□□□□ 0.6
PTPRB-205ENST00000547715 CDC5LQ99459 802 aaKnown RBP18.77■□□□□ 0.6
PTPRB-205ENST00000547715 ANGEL1Q9UNK9 670 aaKnown RBP18.77■□□□□ 0.6
PTPRB-205ENST00000547715 RBBP6Q7Z6E9 1792 aaKnown RBP18.76■□□□□ 0.59
PTPRB-205ENST00000547715 POTEFA5A3E0 1075 aa18.76■□□□□ 0.59
PTPRB-205ENST00000547715 STRIP1Q5VSL9 837 aa18.76■□□□□ 0.59
PTPRB-205ENST00000547715 APOBEC3FQ8IUX4 373 aaKnown RBP18.76■□□□□ 0.59
PTPRB-205ENST00000547715 FZD1Q9UP38 647 aa18.76■□□□□ 0.59
PTPRB-205ENST00000547715 CCT4P50991 539 aaKnown RBP18.75■□□□□ 0.59
PTPRB-205ENST00000547715 LDLRAD1Q5T700 205 aa18.75■□□□□ 0.59
PTPRB-205ENST00000547715 INTS3Q68E01 1043 aaKnown RBP18.75■□□□□ 0.59
PTPRB-205ENST00000547715 OTOP1Q7RTM1 612 aa18.75■□□□□ 0.59
PTPRB-205ENST00000547715 RUNDC1Q96C34 613 aa18.75■□□□□ 0.59
PTPRB-205ENST00000547715 MBIPQ9NS73 344 aa18.75■□□□□ 0.59
PTPRB-205ENST00000547715 MINPP1Q9UNW1 487 aa18.75■□□□□ 0.59
PTPRB-205ENST00000547715 MANSC4A6NHS7 340 aaPredicted RBP18.74■□□□□ 0.59
PTPRB-205ENST00000547715 ELL2O00472 640 aaPredicted RBP18.74■□□□□ 0.59
PTPRB-205ENST00000547715 CTSWP56202 376 aa18.74■□□□□ 0.59
PTPRB-205ENST00000547715 INHBEP58166 350 aa18.74■□□□□ 0.59
PTPRB-205ENST00000547715 IFNL1Q8IU54 200 aa18.74■□□□□ 0.59
PTPRB-205ENST00000547715 KIAA0825Q8IV33 1275 aa18.74■□□□□ 0.59
PTPRB-205ENST00000547715 COA1Q9GZY4 146 aa18.74■□□□□ 0.59
PTPRB-205ENST00000547715 BSDC1Q9NW68 430 aaPredicted RBP18.74■□□□□ 0.59
PTPRB-205ENST00000547715 LAMB1P07942 1786 aa18.73■□□□□ 0.59
PTPRB-205ENST00000547715 RALBP1Q15311 655 aa18.73■□□□□ 0.59
PTPRB-205ENST00000547715 TTLL5Q6EMB2 1281 aa18.73■□□□□ 0.59
PTPRB-205ENST00000547715 SLC10A4Q96EP9 437 aa18.73■□□□□ 0.59
PTPRB-205ENST00000547715 METTL22Q9BUU2 404 aaPredicted RBP18.73■□□□□ 0.59
PTPRB-205ENST00000547715 ECM29Q5VYK3 1845 aa18.72■□□□□ 0.59
PTPRB-205ENST00000547715 MMP14P50281 582 aa18.72■□□□□ 0.59
PTPRB-205ENST00000547715 TXNRD3Q86VQ6 643 aa18.72■□□□□ 0.59
PTPRB-205ENST00000547715 TTLL11Q8NHH1 800 aa18.72■□□□□ 0.59
PTPRB-205ENST00000547715 GREM2Q9H772 168 aa18.72■□□□□ 0.59
PTPRB-205ENST00000547715 DDX58O95786 925 aaKnown RBP18.71■□□□□ 0.59
PTPRB-205ENST00000547715 IGF2BP3O00425 579 aaKnown RBP eCLIP18.7■□□□□ 0.58
PTPRB-205ENST00000547715 CEP290O15078 2479 aa18.7■□□□□ 0.58
PTPRB-205ENST00000547715 ZBTB48P10074 688 aaPredicted RBP18.7■□□□□ 0.58
PTPRB-205ENST00000547715 WDR43Q15061 677 aaKnown RBP eCLIP18.7■□□□□ 0.58
PTPRB-205ENST00000547715 CLMNQ96JQ2 1002 aa18.7■□□□□ 0.58
PTPRB-205ENST00000547715 DEFB129Q9H1M3 183 aa18.7■□□□□ 0.58
PTPRB-205ENST00000547715 PTPN22Q9Y2R2 807 aa18.7■□□□□ 0.58
PTPRB-205ENST00000547715 MAP3K2Q9Y2U5 619 aa18.7■□□□□ 0.58
PTPRB-205ENST00000547715 LEMD3Q9Y2U8 911 aa18.7■□□□□ 0.58
PTPRB-205ENST00000547715 COL1A1P02452 1464 aaPredicted RBP18.7■□□□□ 0.58
PTPRB-205ENST00000547715 GTF2IP78347 998 aa18.69■□□□□ 0.58
PTPRB-205ENST00000547715 CD99L2Q8TCZ2 262 aa18.69■□□□□ 0.58
PTPRB-205ENST00000547715 ERO1AQ96HE7 468 aa18.69■□□□□ 0.58
PTPRB-205ENST00000547715 ZBED3Q96IU2 234 aaPredicted RBP18.69■□□□□ 0.58
PTPRB-205ENST00000547715 WNK4Q96J92 1243 aa18.69■□□□□ 0.58
PTPRB-205ENST00000547715 PPP1R12BO60237 982 aaPredicted RBP18.68■□□□□ 0.58
PTPRB-205ENST00000547715 EN2P19622 333 aaPredicted RBP18.68■□□□□ 0.58
PTPRB-205ENST00000547715 KLRK1P26718 216 aa18.68■□□□□ 0.58
PTPRB-205ENST00000547715 DLGAP5Q15398 846 aa18.68■□□□□ 0.58
PTPRB-205ENST00000547715 MAP3K11Q16584 847 aa18.68■□□□□ 0.58
PTPRB-205ENST00000547715 ZNF804BA4D1E1 1349 aa18.68■□□□□ 0.58
PTPRB-205ENST00000547715 SSC5DA1L4H1 1573 aa18.68■□□□□ 0.58
PTPRB-205ENST00000547715 ZNF853P0CG23 659 aa18.67■□□□□ 0.58
PTPRB-205ENST00000547715 IGHMBP2P38935 993 aaKnown RBP18.67■□□□□ 0.58
PTPRB-205ENST00000547715 FXR1P51114 621 aaKnown RBP eCLIP18.67■□□□□ 0.58
PTPRB-205ENST00000547715 CRHR2Q13324 411 aa18.67■□□□□ 0.58
PTPRB-205ENST00000547715 IGKV5-2P06315 115 aa18.66■□□□□ 0.58
PTPRB-205ENST00000547715 OTUD7BQ6GQQ9 843 aa18.66■□□□□ 0.58
PTPRB-205ENST00000547715 EFCC1Q9HA90 598 aa18.66■□□□□ 0.58
PTPRB-205ENST00000547715 ADAMTS8Q9UP79 889 aa18.66■□□□□ 0.58
PTPRB-205ENST00000547715 MYBBP1AQ9BQG0 1328 aaKnown RBP18.66■□□□□ 0.58
PTPRB-205ENST00000547715 SZT2Q5T011 3432 aa18.65■□□□□ 0.58
PTPRB-205ENST00000547715 PI4KAP2A4QPH2 592 aa18.65■□□□□ 0.58
PTPRB-205ENST00000547715 GNAI1P63096 354 aa18.65■□□□□ 0.58
PTPRB-205ENST00000547715 NEXNQ0ZGT2 675 aa18.65■□□□□ 0.58
PTPRB-205ENST00000547715 CCDC30Q5VVM6 783 aa18.65■□□□□ 0.58
PTPRB-205ENST00000547715 KSR2Q6VAB6 950 aa18.65■□□□□ 0.58
PTPRB-205ENST00000547715 PI4KAP1Q8N8J0 262 aa18.65■□□□□ 0.58
PTPRB-205ENST00000547715 C8orf58Q8NAV2 365 aa18.65■□□□□ 0.58
PTPRB-205ENST00000547715 ARMC5Q96C12 935 aa18.65■□□□□ 0.58
PTPRB-205ENST00000547715 ANKRD2Q9GZV1 360 aa18.65■□□□□ 0.58
PTPRB-205ENST00000547715 IFT57Q9NWB7 429 aa18.65■□□□□ 0.58
PTPRB-205ENST00000547715 MYO1BO43795 1136 aa18.64■□□□□ 0.57
PTPRB-205ENST00000547715 KCNJ4P48050 445 aa18.64■□□□□ 0.57
PTPRB-205ENST00000547715 SP3Q02447 781 aa18.64■□□□□ 0.57
PTPRB-205ENST00000547715 CWF19L2Q2TBE0 894 aaKnown RBP18.64■□□□□ 0.57
PTPRB-205ENST00000547715 SUPT20HL1Q3ZLR7 823 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms