RNA–Protein interactions for RNA: ENST00000547235.5

NPIPB12-202, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 3

Gene NPIPB12, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-202ENST00000547235 TAF7LQ5H9L4 462 aa12.43□□□□□ -0.42
NPIPB12-202ENST00000547235 CHD1LQ86WJ1 897 aa12.43□□□□□ -0.42
NPIPB12-202ENST00000547235 ERC1Q8IUD2 1116 aa12.43□□□□□ -0.42
NPIPB12-202ENST00000547235 TTLL11Q8NHH1 800 aa12.43□□□□□ -0.42
NPIPB12-202ENST00000547235 NLRP3Q96P20 1036 aa12.43□□□□□ -0.42
NPIPB12-202ENST00000547235 PSMD1Q99460 953 aa12.43□□□□□ -0.42
NPIPB12-202ENST00000547235 COPRSQ9NQ92 184 aa12.43□□□□□ -0.42
NPIPB12-202ENST00000547235 APBB1O00213 710 aa12.42□□□□□ -0.42
NPIPB12-202ENST00000547235 RFX5P48382 616 aaPredicted RBP12.42□□□□□ -0.42
NPIPB12-202ENST00000547235 CST9Q5W186 159 aa12.42□□□□□ -0.42
NPIPB12-202ENST00000547235 OLFM4Q6UX06 510 aa12.42□□□□□ -0.42
NPIPB12-202ENST00000547235 USP50Q70EL3 339 aaPredicted RBP12.42□□□□□ -0.42
NPIPB12-202ENST00000547235 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
NPIPB12-202ENST00000547235 LRRCC1Q9C099 1032 aa12.42□□□□□ -0.42
NPIPB12-202ENST00000547235 TSKSQ9UJT2 592 aa12.42□□□□□ -0.42
NPIPB12-202ENST00000547235 GJA3Q9Y6H8 435 aa12.42□□□□□ -0.42
NPIPB12-202ENST00000547235 ITGA6P23229 1130 aa12.41□□□□□ -0.42
NPIPB12-202ENST00000547235 PTPN12Q05209 780 aaKnown RBP12.41□□□□□ -0.42
NPIPB12-202ENST00000547235 FMR1Q06787 632 aaKnown RBP eCLIP12.41□□□□□ -0.42
NPIPB12-202ENST00000547235 SF3B3Q15393 1217 aaKnown RBP12.41□□□□□ -0.42
NPIPB12-202ENST00000547235 HHIPL1Q96JK4 782 aa12.41□□□□□ -0.42
NPIPB12-202ENST00000547235 CCDC85AQ96PX6 553 aaPredicted RBP12.41□□□□□ -0.42
NPIPB12-202ENST00000547235 LNPKQ9C0E8 428 aa12.41□□□□□ -0.42
NPIPB12-202ENST00000547235 FBXO3Q9UK99 471 aa12.41□□□□□ -0.42
NPIPB12-202ENST00000547235 PA2G4Q9UQ80 394 aaKnown RBP12.41□□□□□ -0.42
NPIPB12-202ENST00000547235 AOC2O75106 756 aa12.4□□□□□ -0.42
NPIPB12-202ENST00000547235 EPS15P42566 896 aa12.4□□□□□ -0.42
NPIPB12-202ENST00000547235 SCNN1DP51172 638 aa12.4□□□□□ -0.42
NPIPB12-202ENST00000547235 DGKZQ13574 1117 aa12.4□□□□□ -0.42
NPIPB12-202ENST00000547235 CC2D2BQ6DHV5 1058 aa12.4□□□□□ -0.42
NPIPB12-202ENST00000547235 RHPN1Q8TCX5 695 aa12.4□□□□□ -0.42
NPIPB12-202ENST00000547235 SIL1Q9H173 461 aa12.4□□□□□ -0.42
NPIPB12-202ENST00000547235 GREM2Q9H772 168 aa12.4□□□□□ -0.42
NPIPB12-202ENST00000547235 EYA2O00167 538 aa12.39□□□□□ -0.43
NPIPB12-202ENST00000547235 TRAF5O00463 557 aa12.39□□□□□ -0.43
NPIPB12-202ENST00000547235 CIAO1O76071 339 aa12.39□□□□□ -0.43
NPIPB12-202ENST00000547235 RGS3P49796 1198 aa12.39□□□□□ -0.43
NPIPB12-202ENST00000547235 GRIPAP1Q4V328 841 aa12.39□□□□□ -0.43
NPIPB12-202ENST00000547235 SAPCD2Q86UD0 394 aa12.39□□□□□ -0.43
NPIPB12-202ENST00000547235 CLASRPQ8N2M8 674 aaKnown RBP12.39□□□□□ -0.43
NPIPB12-202ENST00000547235 KLHDC4Q8TBB5 520 aa12.39□□□□□ -0.43
NPIPB12-202ENST00000547235 CDC5LQ99459 802 aaKnown RBP12.39□□□□□ -0.43
NPIPB12-202ENST00000547235 RTL9Q8NET4 1388 aa12.39□□□□□ -0.43
NPIPB12-202ENST00000547235 ABCC12Q96J65 1359 aa12.39□□□□□ -0.43
NPIPB12-202ENST00000547235 SMARCA5O60264 1052 aaPredicted RBP12.38□□□□□ -0.43
NPIPB12-202ENST00000547235 IGHMBP2P38935 993 aaKnown RBP12.38□□□□□ -0.43
NPIPB12-202ENST00000547235 IL15P40933 162 aaPredicted RBP12.38□□□□□ -0.43
NPIPB12-202ENST00000547235 LDHAL6AQ6ZMR3 332 aa12.38□□□□□ -0.43
NPIPB12-202ENST00000547235 ZNF594Q96JF6 807 aaPredicted RBP12.38□□□□□ -0.43
NPIPB12-202ENST00000547235 MPHOSPH8Q99549 860 aa12.38□□□□□ -0.43
NPIPB12-202ENST00000547235 BCL11AQ9H165 835 aa12.38□□□□□ -0.43
NPIPB12-202ENST00000547235 RIC1Q4ADV7 1423 aa12.37□□□□□ -0.43
NPIPB12-202ENST00000547235 TNRC18O15417 2968 aaPredicted RBP12.37□□□□□ -0.43
NPIPB12-202ENST00000547235 CELF2O95319 508 aaKnown RBP12.37□□□□□ -0.43
NPIPB12-202ENST00000547235 DDX46Q7L014 1031 aaKnown RBP12.37□□□□□ -0.43
NPIPB12-202ENST00000547235 ANKRD18AQ8IVF6 992 aa12.37□□□□□ -0.43
NPIPB12-202ENST00000547235 LARGE2Q8N3Y3 721 aa12.37□□□□□ -0.43
NPIPB12-202ENST00000547235 IL1RAPL2Q9NP60 686 aa12.37□□□□□ -0.43
NPIPB12-202ENST00000547235 CNNM1Q9NRU3 951 aa12.37□□□□□ -0.43
NPIPB12-202ENST00000547235 ADARB2Q9NS39 739 aaKnown RBP12.37□□□□□ -0.43
NPIPB12-202ENST00000547235 CEP126Q9P2H0 1117 aa12.37□□□□□ -0.43
NPIPB12-202ENST00000547235 LTBP1Q14766 1721 aa12.37□□□□□ -0.43
NPIPB12-202ENST00000547235 SNED1Q8TER0 1413 aa12.37□□□□□ -0.43
NPIPB12-202ENST00000547235 CACNA1SQ13698 1873 aa12.36□□□□□ -0.43
NPIPB12-202ENST00000547235 LAMB2P55268 1798 aa12.36□□□□□ -0.43
NPIPB12-202ENST00000547235 SASH1O94885 1247 aa12.36□□□□□ -0.43
NPIPB12-202ENST00000547235 CRY2Q49AN0 593 aa12.36□□□□□ -0.43
NPIPB12-202ENST00000547235 RPGRQ92834 1020 aaKnown RBP12.36□□□□□ -0.43
NPIPB12-202ENST00000547235 SEC31BQ9NQW1 1179 aa12.36□□□□□ -0.43
NPIPB12-202ENST00000547235 MYH3P11055 1940 aa12.36□□□□□ -0.43
NPIPB12-202ENST00000547235 DDX60Q8IY21 1712 aaKnown RBP12.36□□□□□ -0.43
NPIPB12-202ENST00000547235 IFIT2P09913 472 aaKnown RBP12.35□□□□□ -0.43
NPIPB12-202ENST00000547235 PDE4AP27815 886 aa12.35□□□□□ -0.43
NPIPB12-202ENST00000547235 LRRC24Q50LG9 513 aa12.35□□□□□ -0.43
NPIPB12-202ENST00000547235 CIAPIN1Q6FI81 312 aa12.35□□□□□ -0.43
NPIPB12-202ENST00000547235 C3orf67Q6ZVT6 689 aa12.35□□□□□ -0.43
NPIPB12-202ENST00000547235 ATG9AQ7Z3C6 839 aa12.35□□□□□ -0.43
NPIPB12-202ENST00000547235 SKAP1Q86WV1 359 aa12.35□□□□□ -0.43
NPIPB12-202ENST00000547235 NIM1KQ8IY84 436 aa12.35□□□□□ -0.43
NPIPB12-202ENST00000547235 RBM17Q96I25 401 aaKnown RBP12.35□□□□□ -0.43
NPIPB12-202ENST00000547235 PUS3Q9BZE2 481 aaKnown RBP12.35□□□□□ -0.43
NPIPB12-202ENST00000547235 GPRC5DQ9NZD1 345 aa12.35□□□□□ -0.43
NPIPB12-202ENST00000547235 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
NPIPB12-202ENST00000547235 RPS8P62241 208 aaKnown RBP12.34□□□□□ -0.43
NPIPB12-202ENST00000547235 TFCP2Q12800 502 aa12.34□□□□□ -0.43
NPIPB12-202ENST00000547235 NOGQ13253 232 aa12.34□□□□□ -0.43
NPIPB12-202ENST00000547235 METTL24Q5JXM2 366 aa12.34□□□□□ -0.43
NPIPB12-202ENST00000547235 PRPF38BQ5VTL8 546 aaKnown RBP12.34□□□□□ -0.43
NPIPB12-202ENST00000547235 VPS33BQ9H267 617 aa12.34□□□□□ -0.43
NPIPB12-202ENST00000547235 GPR108Q9NPR9 543 aa12.34□□□□□ -0.43
NPIPB12-202ENST00000547235 PGAP2Q9UHJ9 254 aa12.34□□□□□ -0.43
NPIPB12-202ENST00000547235 AKAP2Q9Y2D5 859 aa12.34□□□□□ -0.43
NPIPB12-202ENST00000547235 RIPOR2Q9Y4F9 1068 aa12.34□□□□□ -0.43
NPIPB12-202ENST00000547235 MROH5Q6ZUA9 1318 aa12.34□□□□□ -0.43
NPIPB12-202ENST00000547235 COL4A5P29400 1685 aa12.33□□□□□ -0.44
NPIPB12-202ENST00000547235 HOXA10P31260 410 aaPredicted RBP12.33□□□□□ -0.44
NPIPB12-202ENST00000547235 GRAPQ13588 217 aa12.33□□□□□ -0.44
NPIPB12-202ENST00000547235 TNNI3KQ59H18 835 aa12.33□□□□□ -0.44
NPIPB12-202ENST00000547235 AACSQ86V21 672 aa12.33□□□□□ -0.44
NPIPB12-202ENST00000547235 PLEKHM2Q8IWE5 1019 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms