RNA–Protein interactions for RNA: ENST00000547228.1

PFDN5-205, Transcript of prefoldin subunit 5, humanhuman

TSL 5

Gene PFDN5, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-205ENST00000547228 NUDCQ9Y266 331 aa7.6□□□□□ -1.19
PFDN5-205ENST00000547228 ZMYND10O75800 440 aa7.59□□□□□ -1.19
PFDN5-205ENST00000547228 HCLS1P14317 486 aaPredicted RBP7.59□□□□□ -1.19
PFDN5-205ENST00000547228 PRKAR2BP31323 418 aa7.59□□□□□ -1.19
PFDN5-205ENST00000547228 SLC9C1Q4G0N8 1177 aa7.59□□□□□ -1.19
PFDN5-205ENST00000547228 MOB2Q70IA6 237 aa7.59□□□□□ -1.19
PFDN5-205ENST00000547228 IFNL1Q8IU54 200 aa7.59□□□□□ -1.19
PFDN5-205ENST00000547228 OGFOD1Q8N543 542 aa7.59□□□□□ -1.19
PFDN5-205ENST00000547228 CCER1Q8TC90 406 aaPredicted RBP7.59□□□□□ -1.19
PFDN5-205ENST00000547228 ZNF592Q92610 1267 aa7.59□□□□□ -1.19
PFDN5-205ENST00000547228 FBXW7Q969H0 707 aa7.59□□□□□ -1.19
PFDN5-205ENST00000547228 CFAP53Q96M91 514 aa7.59□□□□□ -1.19
PFDN5-205ENST00000547228 R3HDMLQ9H3Y0 253 aa7.59□□□□□ -1.19
PFDN5-205ENST00000547228 MYOZ2Q9NPC6 264 aa7.59□□□□□ -1.19
PFDN5-205ENST00000547228 POLLQ9UGP5 575 aa7.59□□□□□ -1.19
PFDN5-205ENST00000547228 ASTN2O75129 1339 aaPredicted RBP7.58□□□□□ -1.2
PFDN5-205ENST00000547228 SH3TC1Q8TE82 1336 aa7.58□□□□□ -1.2
PFDN5-205ENST00000547228 CACNA1SQ13698 1873 aa7.58□□□□□ -1.2
PFDN5-205ENST00000547228 TRAK2O60296 914 aa7.58□□□□□ -1.2
PFDN5-205ENST00000547228 CLSTN1O94985 981 aa7.58□□□□□ -1.2
PFDN5-205ENST00000547228 NEFMP07197 916 aa7.58□□□□□ -1.2
PFDN5-205ENST00000547228 MMP14P50281 582 aa7.58□□□□□ -1.2
PFDN5-205ENST00000547228 SP3Q02447 781 aa7.58□□□□□ -1.2
PFDN5-205ENST00000547228 PTPN12Q05209 780 aaKnown RBP7.58□□□□□ -1.2
PFDN5-205ENST00000547228 SPRYD7Q5W111 196 aa7.58□□□□□ -1.2
PFDN5-205ENST00000547228 RSBN1LQ6PCB5 846 aaPredicted RBP7.58□□□□□ -1.2
PFDN5-205ENST00000547228 MIS18AQ9NYP9 233 aa7.58□□□□□ -1.2
PFDN5-205ENST00000547228 RBM27Q9P2N5 1060 aaKnown RBP7.58□□□□□ -1.2
PFDN5-205ENST00000547228 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.58□□□□□ -1.2
PFDN5-205ENST00000547228 NR2E3Q9Y5X4 410 aa7.58□□□□□ -1.2
PFDN5-205ENST00000547228 UBR2Q8IWV8 1755 aa7.58□□□□□ -1.2
PFDN5-205ENST00000547228 ERBB4Q15303 1308 aa7.57□□□□□ -1.2
PFDN5-205ENST00000547228 UNCXA6NJT0 531 aa7.57□□□□□ -1.2
PFDN5-205ENST00000547228 ZBTB48P10074 688 aaPredicted RBP7.57□□□□□ -1.2
PFDN5-205ENST00000547228 CC2D1BQ5T0F9 858 aaKnown RBP7.57□□□□□ -1.2
PFDN5-205ENST00000547228 PRAMEF18Q5VWM3 479 aa7.57□□□□□ -1.2
PFDN5-205ENST00000547228 CERS3Q8IU89 383 aa7.57□□□□□ -1.2
PFDN5-205ENST00000547228 TBC1D16Q8TBP0 767 aa7.57□□□□□ -1.2
PFDN5-205ENST00000547228 CD99L2Q8TCZ2 262 aa7.57□□□□□ -1.2
PFDN5-205ENST00000547228 ZNF333Q96JL9 665 aa7.57□□□□□ -1.2
PFDN5-205ENST00000547228 HTATIP2Q9BUP3 242 aa7.57□□□□□ -1.2
PFDN5-205ENST00000547228 ANKIB1Q9P2G1 1089 aa7.57□□□□□ -1.2
PFDN5-205ENST00000547228 RTL9Q8NET4 1388 aa7.57□□□□□ -1.2
PFDN5-205ENST00000547228 A0A1W2PPC1 479 aa7.56□□□□□ -1.2
PFDN5-205ENST00000547228 USP17L3A6NCW0 530 aa7.56□□□□□ -1.2
PFDN5-205ENST00000547228 USP17L4A6NCW7 530 aa7.56□□□□□ -1.2
PFDN5-205ENST00000547228 PPP1R12BO60237 982 aaPredicted RBP7.56□□□□□ -1.2
PFDN5-205ENST00000547228 WDHD1O75717 1129 aaPredicted RBP7.56□□□□□ -1.2
PFDN5-205ENST00000547228 EIF4A1P60842 406 aaKnown RBP7.56□□□□□ -1.2
PFDN5-205ENST00000547228 RPS8P62241 208 aaKnown RBP7.56□□□□□ -1.2
PFDN5-205ENST00000547228 GPSM2P81274 684 aa7.56□□□□□ -1.2
PFDN5-205ENST00000547228 PRKG1Q13976 671 aa7.56□□□□□ -1.2
PFDN5-205ENST00000547228 DCTN1Q14203 1278 aa7.56□□□□□ -1.2
PFDN5-205ENST00000547228 LDLRAD1Q5T700 205 aa7.56□□□□□ -1.2
PFDN5-205ENST00000547228 USP17L1Q7RTZ2 530 aa7.56□□□□□ -1.2
PFDN5-205ENST00000547228 PODNQ7Z5L7 613 aa7.56□□□□□ -1.2
PFDN5-205ENST00000547228 NLRP10Q86W26 655 aa7.56□□□□□ -1.2
PFDN5-205ENST00000547228 NKX2-3Q8TAU0 364 aa7.56□□□□□ -1.2
PFDN5-205ENST00000547228 ZFP91Q96JP5 570 aaPredicted RBP7.56□□□□□ -1.2
PFDN5-205ENST00000547228 CIZ1Q9ULV3 898 aaPredicted RBP7.56□□□□□ -1.2
PFDN5-205ENST00000547228 A6NJR5 290 aa7.55□□□□□ -1.2
PFDN5-205ENST00000547228 U2AF1L5P0DN76 240 aaPredicted RBP7.55□□□□□ -1.2
PFDN5-205ENST00000547228 U2AF1Q01081 240 aaKnown RBP eCLIP7.55□□□□□ -1.2
PFDN5-205ENST00000547228 KIF22Q14807 665 aa7.55□□□□□ -1.2
PFDN5-205ENST00000547228 SF3B3Q15393 1217 aaKnown RBP7.55□□□□□ -1.2
PFDN5-205ENST00000547228 NBPF9Q3BBW0 867 aa7.55□□□□□ -1.2
PFDN5-205ENST00000547228 KDM4CQ9H3R0 1056 aa7.55□□□□□ -1.2
PFDN5-205ENST00000547228 GGA1Q9UJY5 639 aa7.55□□□□□ -1.2
PFDN5-205ENST00000547228 ANGEL1Q9UNK9 670 aaKnown RBP7.55□□□□□ -1.2
PFDN5-205ENST00000547228 UFL1O94874 794 aa7.54□□□□□ -1.2
PFDN5-205ENST00000547228 MYCP01106 439 aaPredicted RBP7.54□□□□□ -1.2
PFDN5-205ENST00000547228 HSPA5P11021 654 aaKnown RBP7.54□□□□□ -1.2
PFDN5-205ENST00000547228 CRHR2Q13324 411 aa7.54□□□□□ -1.2
PFDN5-205ENST00000547228 SUPT20HL1Q3ZLR7 823 aa7.54□□□□□ -1.2
PFDN5-205ENST00000547228 APOBEC3FQ8IUX4 373 aaKnown RBP7.54□□□□□ -1.2
PFDN5-205ENST00000547228 RETREG2Q8NC44 543 aa7.54□□□□□ -1.2
PFDN5-205ENST00000547228 CELF1Q92879 486 aaKnown RBP7.54□□□□□ -1.2
PFDN5-205ENST00000547228 GMLQ99445 158 aa7.54□□□□□ -1.2
PFDN5-205ENST00000547228 BRPF3Q9ULD4 1205 aa7.54□□□□□ -1.2
PFDN5-205ENST00000547228 SCAF8Q9UPN6 1271 aaKnown RBP7.54□□□□□ -1.2
PFDN5-205ENST00000547228 MYO3BQ8WXR4 1341 aa7.53□□□□□ -1.2
PFDN5-205ENST00000547228 WTIPA6NIX2 430 aaPredicted RBP7.53□□□□□ -1.2
PFDN5-205ENST00000547228 IGF2BP3O00425 579 aaKnown RBP eCLIP7.53□□□□□ -1.2
PFDN5-205ENST00000547228 WNT10BO00744 389 aa7.53□□□□□ -1.2
PFDN5-205ENST00000547228 GNRH1P01148 92 aa7.53□□□□□ -1.2
PFDN5-205ENST00000547228 EIF2S2P20042 333 aaKnown RBP7.53□□□□□ -1.2
PFDN5-205ENST00000547228 AIMP1Q12904 312 aaKnown RBP7.53□□□□□ -1.2
PFDN5-205ENST00000547228 POLA2Q14181 598 aa7.53□□□□□ -1.2
PFDN5-205ENST00000547228 GPR153Q6NV75 609 aa7.53□□□□□ -1.2
PFDN5-205ENST00000547228 COPS6Q7L5N1 327 aa7.53□□□□□ -1.2
PFDN5-205ENST00000547228 CLUAP1Q96AJ1 413 aa7.53□□□□□ -1.2
PFDN5-205ENST00000547228 WNK4Q96J92 1243 aa7.53□□□□□ -1.2
PFDN5-205ENST00000547228 THUMPD2Q9BTF0 503 aaKnown RBP7.53□□□□□ -1.2
PFDN5-205ENST00000547228 ZFYVE28Q9HCC9 887 aa7.53□□□□□ -1.2
PFDN5-205ENST00000547228 PAPPA2Q9BXP8 1791 aa7.52□□□□□ -1.21
PFDN5-205ENST00000547228 PER1O15534 1290 aaPredicted RBP7.52□□□□□ -1.21
PFDN5-205ENST00000547228 IREB2P48200 963 aaKnown RBP7.52□□□□□ -1.21
PFDN5-205ENST00000547228 PRMT2P55345 433 aa7.52□□□□□ -1.21
PFDN5-205ENST00000547228 IRF5Q13568 498 aa7.52□□□□□ -1.21
PFDN5-205ENST00000547228 MAP3K11Q16584 847 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms