RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 SLC10A4Q96EP9 437 aa12.06□□□□□ -0.48
SSH1-205ENST00000546812 TMEM106CQ9BVX2 250 aa12.06□□□□□ -0.48
SSH1-205ENST00000546812 EFCC1Q9HA90 598 aa12.06□□□□□ -0.48
SSH1-205ENST00000546812 ANGEL1Q9UNK9 670 aaKnown RBP12.06□□□□□ -0.48
SSH1-205ENST00000546812 CEP290O15078 2479 aa12.06□□□□□ -0.48
SSH1-205ENST00000546812 XDHP47989 1333 aa12.06□□□□□ -0.48
SSH1-205ENST00000546812 IGF2BP3O00425 579 aaKnown RBP eCLIP12.05□□□□□ -0.48
SSH1-205ENST00000546812 ZBTB48P10074 688 aaPredicted RBP12.05□□□□□ -0.48
SSH1-205ENST00000546812 CCDC152Q4G0S7 254 aa12.05□□□□□ -0.48
SSH1-205ENST00000546812 APOBEC3FQ8IUX4 373 aaKnown RBP12.05□□□□□ -0.48
SSH1-205ENST00000546812 CD99L2Q8TCZ2 262 aa12.05□□□□□ -0.48
SSH1-205ENST00000546812 MXD3Q9BW11 206 aa12.05□□□□□ -0.48
SSH1-205ENST00000546812 DDX60Q8IY21 1712 aaKnown RBP12.05□□□□□ -0.48
SSH1-205ENST00000546812 SASH1O94885 1247 aa12.04□□□□□ -0.48
SSH1-205ENST00000546812 MAP3K11Q16584 847 aa12.04□□□□□ -0.48
SSH1-205ENST00000546812 KRT24Q2M2I5 525 aa12.04□□□□□ -0.48
SSH1-205ENST00000546812 HDGFL1Q5TGJ6 251 aa12.04□□□□□ -0.48
SSH1-205ENST00000546812 STRIP1Q5VSL9 837 aa12.04□□□□□ -0.48
SSH1-205ENST00000546812 OTUD7BQ6GQQ9 843 aa12.04□□□□□ -0.48
SSH1-205ENST00000546812 OTUD5Q96G74 571 aa12.04□□□□□ -0.48
SSH1-205ENST00000546812 DBF4Q9UBU7 674 aaPredicted RBP12.04□□□□□ -0.48
SSH1-205ENST00000546812 MYO3BQ8WXR4 1341 aa12.04□□□□□ -0.48
SSH1-205ENST00000546812 WTIPA6NIX2 430 aaPredicted RBP12.03□□□□□ -0.48
SSH1-205ENST00000546812 UNCXA6NJT0 531 aa12.03□□□□□ -0.48
SSH1-205ENST00000546812 H0YGN5 161 aa12.03□□□□□ -0.48
SSH1-205ENST00000546812 CHL1O00533 1208 aa12.03□□□□□ -0.48
SSH1-205ENST00000546812 SP3Q02447 781 aa12.03□□□□□ -0.48
SSH1-205ENST00000546812 CRHR2Q13324 411 aa12.03□□□□□ -0.48
SSH1-205ENST00000546812 ANKRD18AQ8IVF6 992 aa12.03□□□□□ -0.48
SSH1-205ENST00000546812 WNK4Q96J92 1243 aa12.03□□□□□ -0.48
SSH1-205ENST00000546812 ZNF333Q96JL9 665 aa12.03□□□□□ -0.48
SSH1-205ENST00000546812 HYPKQ9NX55 129 aa12.03□□□□□ -0.48
SSH1-205ENST00000546812 FZD1Q9UP38 647 aa12.03□□□□□ -0.48
SSH1-205ENST00000546812 DLL1O00548 723 aa12.02□□□□□ -0.49
SSH1-205ENST00000546812 PPP1R12BO60237 982 aaPredicted RBP12.02□□□□□ -0.49
SSH1-205ENST00000546812 PDE8AO60658 829 aa12.02□□□□□ -0.49
SSH1-205ENST00000546812 HOXB7P09629 217 aa12.02□□□□□ -0.49
SSH1-205ENST00000546812 LMOD3Q0VAK6 560 aa12.02□□□□□ -0.49
SSH1-205ENST00000546812 NBPF11Q86T75 865 aa12.02□□□□□ -0.49
SSH1-205ENST00000546812 ZBED3Q96IU2 234 aaPredicted RBP12.02□□□□□ -0.49
SSH1-205ENST00000546812 CLMNQ96JQ2 1002 aa12.02□□□□□ -0.49
SSH1-205ENST00000546812 CCDC85AQ96PX6 553 aaPredicted RBP12.02□□□□□ -0.49
SSH1-205ENST00000546812 DEFB129Q9H1M3 183 aa12.02□□□□□ -0.49
SSH1-205ENST00000546812 MED23Q9ULK4 1368 aa12.02□□□□□ -0.49
SSH1-205ENST00000546812 DLG5Q8TDM6 1919 aa12.01□□□□□ -0.49
SSH1-205ENST00000546812 ZNF316A6NFI3 1004 aaPredicted RBP12.01□□□□□ -0.49
SSH1-205ENST00000546812 CAP1Q01518 475 aa12.01□□□□□ -0.49
SSH1-205ENST00000546812 FBXW7Q969H0 707 aa12.01□□□□□ -0.49
SSH1-205ENST00000546812 COA1Q9GZY4 146 aa12.01□□□□□ -0.49
SSH1-205ENST00000546812 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.01□□□□□ -0.49
SSH1-205ENST00000546812 TESPA1A2RU30 521 aaPredicted RBP12□□□□□ -0.49
SSH1-205ENST00000546812 PCCAP05165 728 aaPredicted RBP12□□□□□ -0.49
SSH1-205ENST00000546812 TMPOP42166 694 aaKnown RBP12□□□□□ -0.49
SSH1-205ENST00000546812 ARHGEF6Q15052 776 aa12□□□□□ -0.49
SSH1-205ENST00000546812 SLC4A8Q2Y0W8 1093 aa12□□□□□ -0.49
SSH1-205ENST00000546812 SLC9C1Q4G0N8 1177 aa12□□□□□ -0.49
SSH1-205ENST00000546812 TTLL5Q6EMB2 1281 aa12□□□□□ -0.49
SSH1-205ENST00000546812 RIC3Q7Z5B4 369 aa12□□□□□ -0.49
SSH1-205ENST00000546812 CCDC191Q8NCU4 936 aa12□□□□□ -0.49
SSH1-205ENST00000546812 SLC17A8Q8NDX2 589 aa12□□□□□ -0.49
SSH1-205ENST00000546812 PTPN18Q99952 460 aa12□□□□□ -0.49
SSH1-205ENST00000546812 MINPP1Q9UNW1 487 aa12□□□□□ -0.49
SSH1-205ENST00000546812 COL6A3P12111 3177 aa12□□□□□ -0.49
SSH1-205ENST00000546812 CUL9Q8IWT3 2517 aa11.99□□□□□ -0.49
SSH1-205ENST00000546812 CCT4P50991 539 aaKnown RBP11.99□□□□□ -0.49
SSH1-205ENST00000546812 GOLGA2Q08379 1002 aa11.99□□□□□ -0.49
SSH1-205ENST00000546812 CHRDL2Q6WN34 429 aa11.99□□□□□ -0.49
SSH1-205ENST00000546812 KIAA0825Q8IV33 1275 aa11.99□□□□□ -0.49
SSH1-205ENST00000546812 CDC5LQ99459 802 aaKnown RBP11.99□□□□□ -0.49
SSH1-205ENST00000546812 BSDC1Q9NW68 430 aaPredicted RBP11.99□□□□□ -0.49
SSH1-205ENST00000546812 PPP2R3BQ9Y5P8 575 aa11.99□□□□□ -0.49
SSH1-205ENST00000546812 COL1A1P02452 1464 aaPredicted RBP11.98□□□□□ -0.49
SSH1-205ENST00000546812 GJA5P36382 358 aa11.98□□□□□ -0.49
SSH1-205ENST00000546812 IREB2P48200 963 aaKnown RBP11.98□□□□□ -0.49
SSH1-205ENST00000546812 DLGAP5Q15398 846 aa11.98□□□□□ -0.49
SSH1-205ENST00000546812 SUPT20HL1Q3ZLR7 823 aa11.98□□□□□ -0.49
SSH1-205ENST00000546812 TXNRD3Q86VQ6 643 aa11.98□□□□□ -0.49
SSH1-205ENST00000546812 JARID2Q92833 1246 aaPredicted RBP11.98□□□□□ -0.49
SSH1-205ENST00000546812 MYD88Q99836 296 aa11.98□□□□□ -0.49
SSH1-205ENST00000546812 LAS1LQ9Y4W2 734 aaKnown RBP11.98□□□□□ -0.49
SSH1-205ENST00000546812 PTCH2Q9Y6C5 1203 aa11.98□□□□□ -0.49
SSH1-205ENST00000546812 RBBP6Q7Z6E9 1792 aaKnown RBP11.97□□□□□ -0.49
SSH1-205ENST00000546812 USP2O75604 605 aaPredicted RBP11.97□□□□□ -0.49
SSH1-205ENST00000546812 MTMR14Q8NCE2 650 aa11.97□□□□□ -0.49
SSH1-205ENST00000546812 CWC25Q9NXE8 425 aaPredicted RBP11.97□□□□□ -0.49
SSH1-205ENST00000546812 RBM27Q9P2N5 1060 aaKnown RBP11.97□□□□□ -0.49
SSH1-205ENST00000546812 LEMD3Q9Y2U8 911 aa11.97□□□□□ -0.49
SSH1-205ENST00000546812 PSME4Q14997 1843 aa11.96□□□□□ -0.49
SSH1-205ENST00000546812 CTSWP56202 376 aa11.96□□□□□ -0.49
SSH1-205ENST00000546812 GTF2IP78347 998 aa11.96□□□□□ -0.49
SSH1-205ENST00000546812 DDX10Q13206 875 aaKnown RBP11.96□□□□□ -0.49
SSH1-205ENST00000546812 DUSP27Q5VZP5 1158 aa11.96□□□□□ -0.49
SSH1-205ENST00000546812 ANKRD13AQ8IZ07 590 aa11.96□□□□□ -0.49
SSH1-205ENST00000546812 TTLL11Q8NHH1 800 aa11.96□□□□□ -0.49
SSH1-205ENST00000546812 MS4A4AQ96JQ5 239 aa11.96□□□□□ -0.49
SSH1-205ENST00000546812 SSC5DA1L4H1 1573 aa11.96□□□□□ -0.5
SSH1-205ENST00000546812 ZNF804BA4D1E1 1349 aa11.95□□□□□ -0.5
SSH1-205ENST00000546812 MYCP01106 439 aaPredicted RBP11.95□□□□□ -0.5
SSH1-205ENST00000546812 NEUROD2Q15784 382 aa11.95□□□□□ -0.5
SSH1-205ENST00000546812 NBPF12Q5TAG4 269 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 218.3 ms