RNA–Protein interactions for RNA: ENST00000546761.5

PRIM1-202, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-202ENST00000546761 TSPYL6Q8N831 410 aa6.41□□□□□ -1.38
PRIM1-202ENST00000546761 SMARCC1Q92922 1105 aaPredicted RBP6.41□□□□□ -1.38
PRIM1-202ENST00000546761 IRF7Q92985 503 aa6.41□□□□□ -1.38
PRIM1-202ENST00000546761 CHMP4BQ9H444 224 aaKnown RBP6.41□□□□□ -1.38
PRIM1-202ENST00000546761 GOPCQ9HD26 462 aa6.41□□□□□ -1.38
PRIM1-202ENST00000546761 FAM217BQ9NTX9 383 aaPredicted RBP6.41□□□□□ -1.38
PRIM1-202ENST00000546761 PTPRCP08575 1304 aa6.41□□□□□ -1.38
PRIM1-202ENST00000546761 ERBB4Q15303 1308 aa6.41□□□□□ -1.38
PRIM1-202ENST00000546761 TJP1Q07157 1748 aa6.41□□□□□ -1.38
PRIM1-202ENST00000546761 COL5A3P25940 1745 aaPredicted RBP6.4□□□□□ -1.38
PRIM1-202ENST00000546761 RGPD3A6NKT7 1758 aaPredicted RBP6.4□□□□□ -1.38
PRIM1-202ENST00000546761 RGPD4Q7Z3J3 1758 aa6.4□□□□□ -1.38
PRIM1-202ENST00000546761 GIGYF1O75420 1035 aaPredicted RBP6.4□□□□□ -1.38
PRIM1-202ENST00000546761 RXRBP28702 533 aa6.4□□□□□ -1.38
PRIM1-202ENST00000546761 FOXD4L5Q5VV16 416 aaPredicted RBP6.4□□□□□ -1.38
PRIM1-202ENST00000546761 ATF7IPQ6VMQ6 1270 aa6.4□□□□□ -1.38
PRIM1-202ENST00000546761 PARP9Q8IXQ6 854 aa6.4□□□□□ -1.38
PRIM1-202ENST00000546761 FTSJ3Q8IY81 847 aaKnown RBP6.4□□□□□ -1.38
PRIM1-202ENST00000546761 FOXD4L4Q8WXT5 416 aaPredicted RBP6.4□□□□□ -1.38
PRIM1-202ENST00000546761 PIGBQ92521 554 aa6.4□□□□□ -1.38
PRIM1-202ENST00000546761 FRAT1Q92837 279 aaPredicted RBP6.4□□□□□ -1.38
PRIM1-202ENST00000546761 SYTL4Q96C24 671 aaPredicted RBP6.4□□□□□ -1.38
PRIM1-202ENST00000546761 API5Q9BZZ5 524 aaKnown RBP6.4□□□□□ -1.38
PRIM1-202ENST00000546761 DBF4Q9UBU7 674 aaPredicted RBP6.4□□□□□ -1.38
PRIM1-202ENST00000546761 PXDNLA1KZ92 1463 aa6.4□□□□□ -1.39
PRIM1-202ENST00000546761 GMPRP36959 345 aa6.39□□□□□ -1.39
PRIM1-202ENST00000546761 MFAP1P55081 439 aaKnown RBP6.39□□□□□ -1.39
PRIM1-202ENST00000546761 SH3BP2P78314 561 aa6.39□□□□□ -1.39
PRIM1-202ENST00000546761 SLC39A6Q13433 755 aa6.39□□□□□ -1.39
PRIM1-202ENST00000546761 MCM6Q14566 821 aa6.39□□□□□ -1.39
PRIM1-202ENST00000546761 AMHR2Q16671 573 aa6.39□□□□□ -1.39
PRIM1-202ENST00000546761 KRT24Q2M2I5 525 aa6.39□□□□□ -1.39
PRIM1-202ENST00000546761 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
PRIM1-202ENST00000546761 FAM196AQ6ZSG2 479 aa6.39□□□□□ -1.39
PRIM1-202ENST00000546761 KRT27Q7Z3Y8 459 aa6.39□□□□□ -1.39
PRIM1-202ENST00000546761 TRIM46Q7Z4K8 759 aa6.39□□□□□ -1.39
PRIM1-202ENST00000546761 DZIP1LQ8IYY4 767 aaKnown RBP6.39□□□□□ -1.39
PRIM1-202ENST00000546761 ZSCAN1Q8NBB4 408 aa6.39□□□□□ -1.39
PRIM1-202ENST00000546761 ZNF496Q96IT1 587 aaPredicted RBP6.39□□□□□ -1.39
PRIM1-202ENST00000546761 BCL2L13Q9BXK5 485 aa6.39□□□□□ -1.39
PRIM1-202ENST00000546761 GZF1Q9H116 711 aaPredicted RBP6.39□□□□□ -1.39
PRIM1-202ENST00000546761 HYPKQ9NX55 129 aa6.39□□□□□ -1.39
PRIM1-202ENST00000546761 NOB1Q9ULX3 412 aaKnown RBP6.39□□□□□ -1.39
PRIM1-202ENST00000546761 RREB1Q92766 1687 aa6.39□□□□□ -1.39
PRIM1-202ENST00000546761 TAF1LQ8IZX4 1826 aa6.39□□□□□ -1.39
PRIM1-202ENST00000546761 SIAH2O43255 324 aa6.38□□□□□ -1.39
PRIM1-202ENST00000546761 KCNQ3O43525 872 aa6.38□□□□□ -1.39
PRIM1-202ENST00000546761 STARD3NLO95772 234 aa6.38□□□□□ -1.39
PRIM1-202ENST00000546761 DDX58O95786 925 aaKnown RBP6.38□□□□□ -1.39
PRIM1-202ENST00000546761 EIF2S2P20042 333 aaKnown RBP6.38□□□□□ -1.39
PRIM1-202ENST00000546761 RBM25P49756 843 aaKnown RBP6.38□□□□□ -1.39
PRIM1-202ENST00000546761 SCARF1Q14162 830 aa6.38□□□□□ -1.39
PRIM1-202ENST00000546761 BAP1Q92560 729 aa6.38□□□□□ -1.39
PRIM1-202ENST00000546761 CCDC97Q96F63 343 aaPredicted RBP6.38□□□□□ -1.39
PRIM1-202ENST00000546761 ACSBG1Q96GR2 724 aa6.38□□□□□ -1.39
PRIM1-202ENST00000546761 UNC93B1Q9H1C4 597 aa6.38□□□□□ -1.39
PRIM1-202ENST00000546761 DDX21Q9NR30 783 aaKnown RBP eCLIP6.38□□□□□ -1.39
PRIM1-202ENST00000546761 ATG3Q9NT62 314 aa6.38□□□□□ -1.39
PRIM1-202ENST00000546761 SERPINA10Q9UK55 444 aa6.38□□□□□ -1.39
PRIM1-202ENST00000546761 DDX19BQ9UMR2 479 aa6.38□□□□□ -1.39
PRIM1-202ENST00000546761 TLL2Q9Y6L7 1015 aa6.38□□□□□ -1.39
PRIM1-202ENST00000546761 ARFGEF2Q9Y6D5 1785 aa6.38□□□□□ -1.39
PRIM1-202ENST00000546761 AFDNP55196 1824 aaKnown RBP6.38□□□□□ -1.39
PRIM1-202ENST00000546761 ANKRD36CQ5JPF3 1778 aa6.37□□□□□ -1.39
PRIM1-202ENST00000546761 NUP188Q5SRE5 1749 aa6.37□□□□□ -1.39
PRIM1-202ENST00000546761 RGS12O14924 1447 aa6.37□□□□□ -1.39
PRIM1-202ENST00000546761 PALLDQ8WX93 1383 aa6.37□□□□□ -1.39
PRIM1-202ENST00000546761 ABCC4O15439 1325 aa6.37□□□□□ -1.39
PRIM1-202ENST00000546761 PLIN1O60240 522 aa6.37□□□□□ -1.39
PRIM1-202ENST00000546761 PTCD1O75127 700 aaKnown RBP6.37□□□□□ -1.39
PRIM1-202ENST00000546761 TRIM27P14373 513 aa6.37□□□□□ -1.39
PRIM1-202ENST00000546761 CTHP32929 405 aa6.37□□□□□ -1.39
PRIM1-202ENST00000546761 FKBP5Q13451 457 aaPredicted RBP6.37□□□□□ -1.39
PRIM1-202ENST00000546761 TTLL12Q14166 644 aaPredicted RBP6.37□□□□□ -1.39
PRIM1-202ENST00000546761 RETREG2Q8NC44 543 aa6.37□□□□□ -1.39
PRIM1-202ENST00000546761 ZFP42Q96MM3 310 aa6.37□□□□□ -1.39
PRIM1-202ENST00000546761 CHPF2Q9P2E5 772 aa6.37□□□□□ -1.39
PRIM1-202ENST00000546761 ASAP1Q9ULH1 1129 aa6.37□□□□□ -1.39
PRIM1-202ENST00000546761 TNS1Q9HBL0 1735 aaKnown RBP6.36□□□□□ -1.39
PRIM1-202ENST00000546761 NDUFV2P19404 249 aa6.36□□□□□ -1.39
PRIM1-202ENST00000546761 SSTR3P32745 418 aaPredicted RBP6.36□□□□□ -1.39
PRIM1-202ENST00000546761 CCT4P50991 539 aaKnown RBP6.36□□□□□ -1.39
PRIM1-202ENST00000546761 NNTQ13423 1086 aa6.36□□□□□ -1.39
PRIM1-202ENST00000546761 IRF5Q13568 498 aa6.36□□□□□ -1.39
PRIM1-202ENST00000546761 MVPQ14764 893 aaKnown RBP6.36□□□□□ -1.39
PRIM1-202ENST00000546761 PTPRNQ16849 979 aa6.36□□□□□ -1.39
PRIM1-202ENST00000546761 POM121Q96HA1 1249 aa6.36□□□□□ -1.39
PRIM1-202ENST00000546761 PCMTD1Q96MG8 357 aaPredicted RBP6.36□□□□□ -1.39
PRIM1-202ENST00000546761 PPP4R2Q9NY27 417 aa6.36□□□□□ -1.39
PRIM1-202ENST00000546761 PCDHGC3Q9UN70 934 aa6.36□□□□□ -1.39
PRIM1-202ENST00000546761 USP16Q9Y5T5 823 aa6.36□□□□□ -1.39
PRIM1-202ENST00000546761 ATP10DQ9P241 1426 aa6.35□□□□□ -1.39
PRIM1-202ENST00000546761 IBTKQ9P2D0 1353 aaPredicted RBP6.35□□□□□ -1.39
PRIM1-202ENST00000546761 NUP98P52948 1817 aa6.35□□□□□ -1.39
PRIM1-202ENST00000546761 LOC102724428A0A0B4J2F2 783 aa6.35□□□□□ -1.39
PRIM1-202ENST00000546761 TCERG1O14776 1098 aaKnown RBP6.35□□□□□ -1.39
PRIM1-202ENST00000546761 VARSP26640 1264 aaKnown RBP6.35□□□□□ -1.39
PRIM1-202ENST00000546761 SIK1P57059 783 aa6.35□□□□□ -1.39
PRIM1-202ENST00000546761 IRX6P78412 446 aaPredicted RBP6.35□□□□□ -1.39
PRIM1-202ENST00000546761 KCNH2Q12809 1159 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms