RNA–Protein interactions for RNA: ENST00000546512.5

LINC00661-201, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-201ENST00000546512 KLRG1Q96E93 195 aa16.34■□□□□ 0.21
LINC00661-201ENST00000546512 CREBZFQ9NS37 354 aa16.34■□□□□ 0.21
LINC00661-201ENST00000546512 A0A1B0GUL6 1792 aa16.33■□□□□ 0.21
LINC00661-201ENST00000546512 IPO8O15397 1037 aaKnown RBP16.33■□□□□ 0.2
LINC00661-201ENST00000546512 UBTFL1P0CB47 393 aaPredicted RBP16.33■□□□□ 0.2
LINC00661-201ENST00000546512 TBC1D10BQ4KMP7 808 aaPredicted RBP16.33■□□□□ 0.2
LINC00661-201ENST00000546512 SAMD7Q7Z3H4 446 aa16.33■□□□□ 0.2
LINC00661-201ENST00000546512 AGBL3Q8NEM8 1001 aa16.33■□□□□ 0.2
LINC00661-201ENST00000546512 FBXW7Q969H0 707 aa16.33■□□□□ 0.2
LINC00661-201ENST00000546512 PUS3Q9BZE2 481 aaKnown RBP16.33■□□□□ 0.2
LINC00661-201ENST00000546512 TMEM88BA6NKF7 163 aa16.32■□□□□ 0.2
LINC00661-201ENST00000546512 ZNF609O15014 1411 aa16.32■□□□□ 0.2
LINC00661-201ENST00000546512 PSME4Q14997 1843 aa16.32■□□□□ 0.2
LINC00661-201ENST00000546512 RBM26Q5T8P6 1007 aaKnown RBP16.32■□□□□ 0.2
LINC00661-201ENST00000546512 ZC3H15Q8WU90 426 aaKnown RBP16.32■□□□□ 0.2
LINC00661-201ENST00000546512 IRS2Q9Y4H2 1338 aa16.31■□□□□ 0.2
LINC00661-201ENST00000546512 EGFRP00533 1210 aa16.31■□□□□ 0.2
LINC00661-201ENST00000546512 INTS3Q68E01 1043 aaKnown RBP16.31■□□□□ 0.2
LINC00661-201ENST00000546512 C15orf52Q6ZUT6 534 aaKnown RBP16.31■□□□□ 0.2
LINC00661-201ENST00000546512 PGAP2Q9UHJ9 254 aa16.31■□□□□ 0.2
LINC00661-201ENST00000546512 MROH5Q6ZUA9 1318 aa16.3■□□□□ 0.2
LINC00661-201ENST00000546512 TRAF5O00463 557 aa16.3■□□□□ 0.2
LINC00661-201ENST00000546512 TRIM27P14373 513 aa16.3■□□□□ 0.2
LINC00661-201ENST00000546512 FMR1Q06787 632 aaKnown RBP eCLIP16.3■□□□□ 0.2
LINC00661-201ENST00000546512 KIF4BQ2VIQ3 1234 aa16.3■□□□□ 0.2
LINC00661-201ENST00000546512 LRRC24Q50LG9 513 aa16.3■□□□□ 0.2
LINC00661-201ENST00000546512 DACT2Q5SW24 774 aa16.3■□□□□ 0.2
LINC00661-201ENST00000546512 STRIP1Q5VSL9 837 aa16.3■□□□□ 0.2
LINC00661-201ENST00000546512 ATF7IPQ6VMQ6 1270 aa16.3■□□□□ 0.2
LINC00661-201ENST00000546512 ZNF804AQ7Z570 1209 aa16.3■□□□□ 0.2
LINC00661-201ENST00000546512 KLHDC4Q8TBB5 520 aa16.3■□□□□ 0.2
LINC00661-201ENST00000546512 GMLQ99445 158 aa16.3■□□□□ 0.2
LINC00661-201ENST00000546512 CD209Q9NNX6 404 aa16.3■□□□□ 0.2
LINC00661-201ENST00000546512 HDAC5Q9UQL6 1122 aa16.3■□□□□ 0.2
LINC00661-201ENST00000546512 RIPOR2Q9Y4F9 1068 aa16.3■□□□□ 0.2
LINC00661-201ENST00000546512 USP17L8P0C7I0 530 aa16.29■□□□□ 0.2
LINC00661-201ENST00000546512 ZNF280AP59817 542 aaPredicted RBP16.29■□□□□ 0.2
LINC00661-201ENST00000546512 TTLL5Q6EMB2 1281 aa16.29■□□□□ 0.2
LINC00661-201ENST00000546512 CLUAP1Q96AJ1 413 aa16.29■□□□□ 0.2
LINC00661-201ENST00000546512 MEIS3Q99687 375 aa16.29■□□□□ 0.2
LINC00661-201ENST00000546512 MXD3Q9BW11 206 aa16.29■□□□□ 0.2
LINC00661-201ENST00000546512 GLIS2Q9BZE0 524 aaPredicted RBP16.29■□□□□ 0.2
LINC00661-201ENST00000546512 TNNQ9UQP3 1299 aa16.29■□□□□ 0.2
LINC00661-201ENST00000546512 MYO3BQ8WXR4 1341 aa16.28■□□□□ 0.2
LINC00661-201ENST00000546512 GTF2IP78347 998 aa16.28■□□□□ 0.2
LINC00661-201ENST00000546512 UBE4AQ14139 1066 aa16.28■□□□□ 0.2
LINC00661-201ENST00000546512 METTL24Q5JXM2 366 aa16.28■□□□□ 0.2
LINC00661-201ENST00000546512 ZKSCAN2Q63HK3 967 aa16.28■□□□□ 0.2
LINC00661-201ENST00000546512 CDC37L1Q7L3B6 337 aa16.28■□□□□ 0.2
LINC00661-201ENST00000546512 MKRN1Q9UHC7 482 aaKnown RBP16.28■□□□□ 0.2
LINC00661-201ENST00000546512 LRRFIP2Q9Y608 721 aaKnown RBP16.28■□□□□ 0.2
LINC00661-201ENST00000546512 ZNF646O15015 1829 aaPredicted RBP16.27■□□□□ 0.2
LINC00661-201ENST00000546512 RFX5P48382 616 aaPredicted RBP16.27■□□□□ 0.2
LINC00661-201ENST00000546512 JMYQ8N9B5 988 aa16.27■□□□□ 0.2
LINC00661-201ENST00000546512 MYOZ2Q9NPC6 264 aa16.27■□□□□ 0.2
LINC00661-201ENST00000546512 GNAI3P08754 354 aa16.26■□□□□ 0.19
LINC00661-201ENST00000546512 IL1R1P14778 569 aa16.26■□□□□ 0.19
LINC00661-201ENST00000546512 PTPN12Q05209 780 aaKnown RBP16.26■□□□□ 0.19
LINC00661-201ENST00000546512 OGFOD1Q8N543 542 aa16.26■□□□□ 0.19
LINC00661-201ENST00000546512 DCPSQ96C86 337 aaKnown RBP16.26■□□□□ 0.19
LINC00661-201ENST00000546512 GGA3Q9NZ52 723 aa16.26■□□□□ 0.19
LINC00661-201ENST00000546512 ABT1Q9ULW3 272 aaKnown RBP16.26■□□□□ 0.19
LINC00661-201ENST00000546512 CNTNAP1P78357 1384 aa16.26■□□□□ 0.19
LINC00661-201ENST00000546512 ASTN2O75129 1339 aaPredicted RBP16.25■□□□□ 0.19
LINC00661-201ENST00000546512 EYA2O00167 538 aa16.25■□□□□ 0.19
LINC00661-201ENST00000546512 PDE8BO95263 885 aa16.25■□□□□ 0.19
LINC00661-201ENST00000546512 GYG1P46976 350 aa16.25■□□□□ 0.19
LINC00661-201ENST00000546512 SCARF1Q14162 830 aa16.25■□□□□ 0.19
LINC00661-201ENST00000546512 CST9Q5W186 159 aa16.25■□□□□ 0.19
LINC00661-201ENST00000546512 KRT26Q7Z3Y9 468 aa16.25■□□□□ 0.19
LINC00661-201ENST00000546512 USP48Q86UV5 1035 aa16.25■□□□□ 0.19
LINC00661-201ENST00000546512 VGLL2Q8N8G2 317 aa16.25■□□□□ 0.19
LINC00661-201ENST00000546512 CELF2O95319 508 aaKnown RBP16.24■□□□□ 0.19
LINC00661-201ENST00000546512 HIBADHP31937 336 aaKnown RBP16.24■□□□□ 0.19
LINC00661-201ENST00000546512 KIAA0825Q8IV33 1275 aa16.24■□□□□ 0.19
LINC00661-201ENST00000546512 TMEM57Q8N5G2 664 aa16.24■□□□□ 0.19
LINC00661-201ENST00000546512 SIL1Q9H173 461 aa16.24■□□□□ 0.19
LINC00661-201ENST00000546512 ZNF408Q9H9D4 720 aa16.24■□□□□ 0.19
LINC00661-201ENST00000546512 TRPM7Q96QT4 1865 aa16.23■□□□□ 0.19
LINC00661-201ENST00000546512 ADM5C9JUS6 153 aa16.23■□□□□ 0.19
LINC00661-201ENST00000546512 ANGEL2Q5VTE6 544 aaKnown RBP16.23■□□□□ 0.19
LINC00661-201ENST00000546512 FTSJ3Q8IY81 847 aaKnown RBP16.23■□□□□ 0.19
LINC00661-201ENST00000546512 CERS5Q8N5B7 392 aa16.23■□□□□ 0.19
LINC00661-201ENST00000546512 FAM84BQ96KN1 310 aaPredicted RBP16.23■□□□□ 0.19
LINC00661-201ENST00000546512 HDAC9Q9UKV0 1011 aa16.23■□□□□ 0.19
LINC00661-201ENST00000546512 JAG2Q9Y219 1238 aa16.23■□□□□ 0.19
LINC00661-201ENST00000546512 RASSF10A6NK89 507 aa16.22■□□□□ 0.19
LINC00661-201ENST00000546512 MMP14P50281 582 aa16.22■□□□□ 0.19
LINC00661-201ENST00000546512 PUM3Q15397 648 aaKnown RBP16.22■□□□□ 0.19
LINC00661-201ENST00000546512 DEFB115Q30KQ5 88 aa16.22■□□□□ 0.19
LINC00661-201ENST00000546512 CAVIN4Q5BKX8 364 aa16.22■□□□□ 0.19
LINC00661-201ENST00000546512 DLK2Q6UY11 383 aa16.22■□□□□ 0.19
LINC00661-201ENST00000546512 ATG9AQ7Z3C6 839 aa16.22■□□□□ 0.19
LINC00661-201ENST00000546512 VPS37DQ86XT2 251 aa16.22■□□□□ 0.19
LINC00661-201ENST00000546512 SULF1Q8IWU6 871 aa16.22■□□□□ 0.19
LINC00661-201ENST00000546512 TDRD7Q8NHU6 1098 aaKnown RBP16.22■□□□□ 0.19
LINC00661-201ENST00000546512 FBXO3Q9UK99 471 aa16.22■□□□□ 0.19
LINC00661-201ENST00000546512 CIAO1O76071 339 aa16.21■□□□□ 0.19
LINC00661-201ENST00000546512 SASH1O94885 1247 aa16.21■□□□□ 0.19
LINC00661-201ENST00000546512 GNAI2P04899 355 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms