RNA–Protein interactions for RNA: ENST00000546480.1

VENTXP3-201, Transcript of VENT homeobox pseudogene 3, humanhuman

BASIC

Gene VENTXP3, Length 773 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VENTXP3-201ENST00000546480 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.17■□□□□ 0.34
VENTXP3-201ENST00000546480 COA1Q9GZY4 146 aa17.17■□□□□ 0.34
VENTXP3-201ENST00000546480 ZNF804AQ7Z570 1209 aa17.16■□□□□ 0.34
VENTXP3-201ENST00000546480 C1orf115Q9H7X2 142 aa17.16■□□□□ 0.34
VENTXP3-201ENST00000546480 GPRC5DQ9NZD1 345 aa17.16■□□□□ 0.34
VENTXP3-201ENST00000546480 SCN9AQ15858 1988 aa17.15■□□□□ 0.34
VENTXP3-201ENST00000546480 USP17L3A6NCW0 530 aa17.15■□□□□ 0.34
VENTXP3-201ENST00000546480 USP17L4A6NCW7 530 aa17.15■□□□□ 0.34
VENTXP3-201ENST00000546480 H7C1D1 291 aa17.15■□□□□ 0.34
VENTXP3-201ENST00000546480 RFX5P48382 616 aaPredicted RBP17.15■□□□□ 0.34
VENTXP3-201ENST00000546480 PTPN12Q05209 780 aaKnown RBP17.15■□□□□ 0.34
VENTXP3-201ENST00000546480 FSTL1Q12841 308 aa17.15■□□□□ 0.34
VENTXP3-201ENST00000546480 CHADLQ6NUI6 762 aa17.15■□□□□ 0.34
VENTXP3-201ENST00000546480 USP17L1Q7RTZ2 530 aa17.15■□□□□ 0.34
VENTXP3-201ENST00000546480 LDHDQ86WU2 507 aa17.15■□□□□ 0.34
VENTXP3-201ENST00000546480 MICALL2Q8IY33 904 aa17.15■□□□□ 0.34
VENTXP3-201ENST00000546480 ADARB2Q9NS39 739 aaKnown RBP17.15■□□□□ 0.34
VENTXP3-201ENST00000546480 CNOT7Q9UIV1 285 aaKnown RBP17.15■□□□□ 0.34
VENTXP3-201ENST00000546480 PA2G4Q9UQ80 394 aaKnown RBP17.15■□□□□ 0.34
VENTXP3-201ENST00000546480 RIPOR2Q9Y4F9 1068 aa17.15■□□□□ 0.34
VENTXP3-201ENST00000546480 EYA2O00167 538 aa17.14■□□□□ 0.33
VENTXP3-201ENST00000546480 UBE4AQ14139 1066 aa17.14■□□□□ 0.33
VENTXP3-201ENST00000546480 RBM26Q5T8P6 1007 aaKnown RBP17.14■□□□□ 0.33
VENTXP3-201ENST00000546480 VPS37DQ86XT2 251 aa17.14■□□□□ 0.33
VENTXP3-201ENST00000546480 PSME4Q14997 1843 aa17.14■□□□□ 0.33
VENTXP3-201ENST00000546480 RPS12P25398 132 aaKnown RBP17.13■□□□□ 0.33
VENTXP3-201ENST00000546480 RSBN1LQ6PCB5 846 aaPredicted RBP17.13■□□□□ 0.33
VENTXP3-201ENST00000546480 USP50Q70EL3 339 aaPredicted RBP17.13■□□□□ 0.33
VENTXP3-201ENST00000546480 CD209Q9NNX6 404 aa17.13■□□□□ 0.33
VENTXP3-201ENST00000546480 SHTN1A0MZ66 631 aa17.12■□□□□ 0.33
VENTXP3-201ENST00000546480 FRAT2O75474 233 aaPredicted RBP17.12■□□□□ 0.33
VENTXP3-201ENST00000546480 PDE8BO95263 885 aa17.12■□□□□ 0.33
VENTXP3-201ENST00000546480 VIL1P09327 827 aaKnown RBP17.12■□□□□ 0.33
VENTXP3-201ENST00000546480 HSPA6P17066 643 aa17.12■□□□□ 0.33
VENTXP3-201ENST00000546480 GYG1P46976 350 aa17.12■□□□□ 0.33
VENTXP3-201ENST00000546480 GTF2IP78347 998 aa17.12■□□□□ 0.33
VENTXP3-201ENST00000546480 CAVIN4Q5BKX8 364 aa17.12■□□□□ 0.33
VENTXP3-201ENST00000546480 TTLL5Q6EMB2 1281 aa17.12■□□□□ 0.33
VENTXP3-201ENST00000546480 COG6Q9Y2V7 657 aa17.12■□□□□ 0.33
VENTXP3-201ENST00000546480 IFIT1P09914 478 aaKnown RBP17.11■□□□□ 0.33
VENTXP3-201ENST00000546480 PUM3Q15397 648 aaKnown RBP17.11■□□□□ 0.33
VENTXP3-201ENST00000546480 TBC1D10BQ4KMP7 808 aaPredicted RBP17.11■□□□□ 0.33
VENTXP3-201ENST00000546480 MAP1SQ66K74 1059 aaPredicted RBP17.11■□□□□ 0.33
VENTXP3-201ENST00000546480 DPF2Q92785 391 aa17.11■□□□□ 0.33
VENTXP3-201ENST00000546480 MXD3Q9BW11 206 aa17.11■□□□□ 0.33
VENTXP3-201ENST00000546480 CEP126Q9P2H0 1117 aa17.11■□□□□ 0.33
VENTXP3-201ENST00000546480 JAG2Q9Y219 1238 aa17.11■□□□□ 0.33
VENTXP3-201ENST00000546480 PNMA6EA0A0J9YXQ4 647 aa17.1■□□□□ 0.33
VENTXP3-201ENST00000546480 ZBTB7BO15156 539 aaPredicted RBP17.1■□□□□ 0.33
VENTXP3-201ENST00000546480 SLC5A1P13866 664 aa17.1■□□□□ 0.33
VENTXP3-201ENST00000546480 HIBADHP31937 336 aaKnown RBP17.1■□□□□ 0.33
VENTXP3-201ENST00000546480 IL15P40933 162 aaPredicted RBP17.1■□□□□ 0.33
VENTXP3-201ENST00000546480 MVPQ14764 893 aaKnown RBP17.1■□□□□ 0.33
VENTXP3-201ENST00000546480 C15orf52Q6ZUT6 534 aaKnown RBP17.1■□□□□ 0.33
VENTXP3-201ENST00000546480 SAMD7Q7Z3H4 446 aa17.1■□□□□ 0.33
VENTXP3-201ENST00000546480 AGBL3Q8NEM8 1001 aa17.1■□□□□ 0.33
VENTXP3-201ENST00000546480 TRPM4Q8TD43 1214 aa17.1■□□□□ 0.33
VENTXP3-201ENST00000546480 ADAMTSL1Q8N6G6 1762 aa17.1■□□□□ 0.33
VENTXP3-201ENST00000546480 CIAO1O76071 339 aa17.09■□□□□ 0.33
VENTXP3-201ENST00000546480 OS9Q13438 667 aaPredicted RBP17.09■□□□□ 0.33
VENTXP3-201ENST00000546480 STRIP1Q5VSL9 837 aa17.09■□□□□ 0.33
VENTXP3-201ENST00000546480 ATG9AQ7Z3C6 839 aa17.09■□□□□ 0.33
VENTXP3-201ENST00000546480 COPRSQ9NQ92 184 aa17.09■□□□□ 0.33
VENTXP3-201ENST00000546480 FBXO3Q9UK99 471 aa17.09■□□□□ 0.33
VENTXP3-201ENST00000546480 DDX19BQ9UMR2 479 aa17.09■□□□□ 0.33
VENTXP3-201ENST00000546480 IQSEC3Q9UPP2 1182 aaPredicted RBP17.09■□□□□ 0.33
VENTXP3-201ENST00000546480 MYO3BQ8WXR4 1341 aa17.09■□□□□ 0.33
VENTXP3-201ENST00000546480 IRS2Q9Y4H2 1338 aa17.08■□□□□ 0.32
VENTXP3-201ENST00000546480 USP17L8P0C7I0 530 aa17.08■□□□□ 0.32
VENTXP3-201ENST00000546480 CHAF1AQ13111 956 aaPredicted RBP17.08■□□□□ 0.32
VENTXP3-201ENST00000546480 G3BP1Q13283 466 aaKnown RBP eCLIP17.08■□□□□ 0.32
VENTXP3-201ENST00000546480 MTX1Q13505 466 aa17.08■□□□□ 0.32
VENTXP3-201ENST00000546480 ATP2B3Q16720 1220 aa17.08■□□□□ 0.32
VENTXP3-201ENST00000546480 KIF4BQ2VIQ3 1234 aa17.08■□□□□ 0.32
VENTXP3-201ENST00000546480 DACT2Q5SW24 774 aa17.08■□□□□ 0.32
VENTXP3-201ENST00000546480 OGFOD1Q8N543 542 aa17.08■□□□□ 0.32
VENTXP3-201ENST00000546480 VGLL2Q8N8G2 317 aa17.08■□□□□ 0.32
VENTXP3-201ENST00000546480 F8W031 263 aaPredicted RBP17.07■□□□□ 0.32
VENTXP3-201ENST00000546480 IL1R1P14778 569 aa17.07■□□□□ 0.32
VENTXP3-201ENST00000546480 APLP1P51693 650 aa17.07■□□□□ 0.32
VENTXP3-201ENST00000546480 C20orf194Q5TEA3 1177 aa17.07■□□□□ 0.32
VENTXP3-201ENST00000546480 KIAA0825Q8IV33 1275 aa17.07■□□□□ 0.32
VENTXP3-201ENST00000546480 CNTROBQ8N137 903 aa17.07■□□□□ 0.32
VENTXP3-201ENST00000546480 LPIN2Q92539 896 aa17.07■□□□□ 0.32
VENTXP3-201ENST00000546480 FAM84BQ96KN1 310 aaPredicted RBP17.07■□□□□ 0.32
VENTXP3-201ENST00000546480 HDAC9Q9UKV0 1011 aa17.07■□□□□ 0.32
VENTXP3-201ENST00000546480 ZNF646O15015 1829 aaPredicted RBP17.07■□□□□ 0.32
VENTXP3-201ENST00000546480 ATP8B2P98198 1209 aa17.06■□□□□ 0.32
VENTXP3-201ENST00000546480 CHMP4BQ9H444 224 aaKnown RBP17.06■□□□□ 0.32
VENTXP3-201ENST00000546480 MYOZ2Q9NPC6 264 aa17.06■□□□□ 0.32
VENTXP3-201ENST00000546480 MYH13Q9UKX3 1938 aa17.06■□□□□ 0.32
VENTXP3-201ENST00000546480 EGFRP00533 1210 aa17.05■□□□□ 0.32
VENTXP3-201ENST00000546480 BCAMP50895 628 aa17.05■□□□□ 0.32
VENTXP3-201ENST00000546480 HIRAP54198 1017 aaPredicted RBP17.05■□□□□ 0.32
VENTXP3-201ENST00000546480 HTRA3P83110 453 aa17.05■□□□□ 0.32
VENTXP3-201ENST00000546480 TFCP2Q12800 502 aa17.05■□□□□ 0.32
VENTXP3-201ENST00000546480 SURF6O75683 361 aaKnown RBP17.04■□□□□ 0.32
VENTXP3-201ENST00000546480 FGFR2P21802 821 aa17.04■□□□□ 0.32
VENTXP3-201ENST00000546480 PDE3AQ14432 1141 aa17.04■□□□□ 0.32
VENTXP3-201ENST00000546480 CEP85Q6P2H3 762 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms