RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ABCF2Q9UG63 623 aa14.33□□□□□ -0.11
CCDC38-202ENST00000546386 WWC3Q9ULE0 1092 aa14.33□□□□□ -0.11
CCDC38-202ENST00000546386 TPCN1Q9ULQ1 816 aa14.33□□□□□ -0.11
CCDC38-202ENST00000546386 SPATA31A6Q5VVP1 1343 aa14.33□□□□□ -0.12
CCDC38-202ENST00000546386 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.33□□□□□ -0.12
CCDC38-202ENST00000546386 CIAO1O76071 339 aa14.33□□□□□ -0.12
CCDC38-202ENST00000546386 CHRNDQ07001 517 aa14.33□□□□□ -0.12
CCDC38-202ENST00000546386 STOX1Q6ZVD7 989 aa14.33□□□□□ -0.12
CCDC38-202ENST00000546386 MIGA1Q8NAN2 632 aa14.33□□□□□ -0.12
CCDC38-202ENST00000546386 TRPC5Q9UL62 973 aaPredicted RBP14.33□□□□□ -0.12
CCDC38-202ENST00000546386 RIC1Q4ADV7 1423 aa14.33□□□□□ -0.12
CCDC38-202ENST00000546386 MAST3O60307 1309 aa14.33□□□□□ -0.12
CCDC38-202ENST00000546386 ABCC12Q96J65 1359 aa14.33□□□□□ -0.12
CCDC38-202ENST00000546386 SMIM22K7EJ46 135 aa14.32□□□□□ -0.12
CCDC38-202ENST00000546386 TRAK2O60296 914 aa14.32□□□□□ -0.12
CCDC38-202ENST00000546386 ME3Q16798 604 aa14.32□□□□□ -0.12
CCDC38-202ENST00000546386 VGLL2Q8N8G2 317 aa14.32□□□□□ -0.12
CCDC38-202ENST00000546386 CYP46A1Q9Y6A2 500 aa14.32□□□□□ -0.12
CCDC38-202ENST00000546386 CHMP4CQ96CF2 233 aa14.32□□□□□ -0.12
CCDC38-202ENST00000546386 AK7Q96M32 723 aa14.32□□□□□ -0.12
CCDC38-202ENST00000546386 PLA2G12BQ9BX93 195 aa14.32□□□□□ -0.12
CCDC38-202ENST00000546386 AKAP2Q9Y2D5 859 aa14.32□□□□□ -0.12
CCDC38-202ENST00000546386 HSPD1P10809 573 aaKnown RBP14.31□□□□□ -0.12
CCDC38-202ENST00000546386 FGD1P98174 961 aa14.31□□□□□ -0.12
CCDC38-202ENST00000546386 RASGRF1Q13972 1273 aa14.31□□□□□ -0.12
CCDC38-202ENST00000546386 CDHR2Q9BYE9 1310 aa14.31□□□□□ -0.12
CCDC38-202ENST00000546386 PRPF40AO75400 957 aaKnown RBP14.31□□□□□ -0.12
CCDC38-202ENST00000546386 IGHMBP2P38935 993 aaKnown RBP14.31□□□□□ -0.12
CCDC38-202ENST00000546386 CCDC152Q4G0S7 254 aa14.31□□□□□ -0.12
CCDC38-202ENST00000546386 FAM173BQ6P4H8 233 aa14.31□□□□□ -0.12
CCDC38-202ENST00000546386 FERMT3Q86UX7 667 aa14.31□□□□□ -0.12
CCDC38-202ENST00000546386 TTC14Q96N46 770 aa14.31□□□□□ -0.12
CCDC38-202ENST00000546386 RNF113AO15541 343 aaKnown RBP14.3□□□□□ -0.12
CCDC38-202ENST00000546386 DDX11Q96FC9 970 aa14.3□□□□□ -0.12
CCDC38-202ENST00000546386 HMG20BQ9P0W2 317 aa14.3□□□□□ -0.12
CCDC38-202ENST00000546386 BAG4O95429 457 aaKnown RBP14.3□□□□□ -0.12
CCDC38-202ENST00000546386 TRAPPC3LQ5T215 181 aa14.3□□□□□ -0.12
CCDC38-202ENST00000546386 MSL1Q68DK7 614 aa14.3□□□□□ -0.12
CCDC38-202ENST00000546386 TXNRD3Q86VQ6 643 aa14.3□□□□□ -0.12
CCDC38-202ENST00000546386 ZNF652Q9Y2D9 606 aa14.3□□□□□ -0.12
CCDC38-202ENST00000546386 HSP90B1P14625 803 aaKnown RBP14.29□□□□□ -0.12
CCDC38-202ENST00000546386 ANAPC15P60006 121 aa14.29□□□□□ -0.12
CCDC38-202ENST00000546386 CCT2P78371 535 aaKnown RBP14.29□□□□□ -0.12
CCDC38-202ENST00000546386 ST3GAL1Q11201 340 aa14.29□□□□□ -0.12
CCDC38-202ENST00000546386 BLOC1S2Q6QNY1 142 aa14.29□□□□□ -0.12
CCDC38-202ENST00000546386 MED23Q9ULK4 1368 aa14.29□□□□□ -0.12
CCDC38-202ENST00000546386 PRKAB2O43741 272 aa14.29□□□□□ -0.12
CCDC38-202ENST00000546386 RPS6KA4O75676 772 aa14.29□□□□□ -0.12
CCDC38-202ENST00000546386 OLFM4Q6UX06 510 aa14.29□□□□□ -0.12
CCDC38-202ENST00000546386 KRT27Q7Z3Y8 459 aa14.29□□□□□ -0.12
CCDC38-202ENST00000546386 PROM2Q8N271 834 aa14.29□□□□□ -0.12
CCDC38-202ENST00000546386 MAGEB6Q8N7X4 407 aa14.29□□□□□ -0.12
CCDC38-202ENST00000546386 NCOA5Q9HCD5 579 aaKnown RBP14.29□□□□□ -0.12
CCDC38-202ENST00000546386 NSFL1CQ9UNZ2 370 aaKnown RBP14.29□□□□□ -0.12
CCDC38-202ENST00000546386 FOXP2O15409 715 aa14.29□□□□□ -0.12
CCDC38-202ENST00000546386 PUM3Q15397 648 aaKnown RBP14.29□□□□□ -0.12
CCDC38-202ENST00000546386 BRF1Q92994 677 aa14.29□□□□□ -0.12
CCDC38-202ENST00000546386 LIMCH1Q9UPQ0 1083 aa14.29□□□□□ -0.12
CCDC38-202ENST00000546386 HIP1O00291 1037 aa14.28□□□□□ -0.12
CCDC38-202ENST00000546386 NFIXQ14938 502 aa14.28□□□□□ -0.12
CCDC38-202ENST00000546386 Q6ZUG5 572 aa14.28□□□□□ -0.12
CCDC38-202ENST00000546386 ZSWIM6Q9HCJ5 1215 aa14.28□□□□□ -0.12
CCDC38-202ENST00000546386 RBM27Q9P2N5 1060 aaKnown RBP14.28□□□□□ -0.12
CCDC38-202ENST00000546386 WNK3Q9BYP7 1800 aa14.28□□□□□ -0.12
CCDC38-202ENST00000546386 ZNF532Q9HCE3 1301 aa14.28□□□□□ -0.12
CCDC38-202ENST00000546386 GPAA1O43292 621 aa14.28□□□□□ -0.12
CCDC38-202ENST00000546386 JAK2O60674 1132 aa14.28□□□□□ -0.12
CCDC38-202ENST00000546386 FGAP02671 866 aa14.28□□□□□ -0.12
CCDC38-202ENST00000546386 RXRAP19793 462 aa14.28□□□□□ -0.12
CCDC38-202ENST00000546386 CHAF1AQ13111 956 aaPredicted RBP14.28□□□□□ -0.12
CCDC38-202ENST00000546386 PARP10Q53GL7 1025 aa14.28□□□□□ -0.12
CCDC38-202ENST00000546386 ZMYM1Q5SVZ6 1142 aa14.28□□□□□ -0.12
CCDC38-202ENST00000546386 VPS37DQ86XT2 251 aa14.28□□□□□ -0.12
CCDC38-202ENST00000546386 ANKRD18AQ8IVF6 992 aa14.28□□□□□ -0.12
CCDC38-202ENST00000546386 NARFQ9UHQ1 456 aa14.28□□□□□ -0.12
CCDC38-202ENST00000546386 VPS37CA5D8V6 355 aaPredicted RBP14.27□□□□□ -0.13
CCDC38-202ENST00000546386 APOBRQ0VD83 1088 aa14.27□□□□□ -0.13
CCDC38-202ENST00000546386 TOB2Q14106 344 aaPredicted RBP14.27□□□□□ -0.13
CCDC38-202ENST00000546386 SPATA5Q8NB90 893 aa14.27□□□□□ -0.13
CCDC38-202ENST00000546386 NEK1Q96PY6 1258 aa14.27□□□□□ -0.13
CCDC38-202ENST00000546386 ARMT1Q9H993 441 aa14.27□□□□□ -0.13
CCDC38-202ENST00000546386 GJB2P29033 226 aa14.27□□□□□ -0.13
CCDC38-202ENST00000546386 EVX2Q03828 476 aa14.27□□□□□ -0.13
CCDC38-202ENST00000546386 LPIN2Q92539 896 aa14.27□□□□□ -0.13
CCDC38-202ENST00000546386 GPR108Q9NPR9 543 aa14.27□□□□□ -0.13
CCDC38-202ENST00000546386 MINPP1Q9UNW1 487 aa14.27□□□□□ -0.13
CCDC38-202ENST00000546386 MYO5AQ9Y4I1 1855 aaKnown RBP14.26□□□□□ -0.13
CCDC38-202ENST00000546386 ADGRA1Q86SQ6 560 aa14.26□□□□□ -0.13
CCDC38-202ENST00000546386 LRP2BPQ9P2M1 347 aa14.26□□□□□ -0.13
CCDC38-202ENST00000546386 BRPF3Q9ULD4 1205 aa14.26□□□□□ -0.13
CCDC38-202ENST00000546386 RNF20Q5VTR2 975 aa14.26□□□□□ -0.13
CCDC38-202ENST00000546386 CCDC144CPQ8IYA2 1237 aa14.26□□□□□ -0.13
CCDC38-202ENST00000546386 NLRP3Q96P20 1036 aa14.26□□□□□ -0.13
CCDC38-202ENST00000546386 DDX49Q9Y6V7 483 aaKnown RBP14.26□□□□□ -0.13
CCDC38-202ENST00000546386 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.25□□□□□ -0.13
CCDC38-202ENST00000546386 APBA3O96018 575 aa14.25□□□□□ -0.13
CCDC38-202ENST00000546386 SLC5A1P13866 664 aa14.25□□□□□ -0.13
CCDC38-202ENST00000546386 RPS6KB1P23443 525 aa14.25□□□□□ -0.13
CCDC38-202ENST00000546386 ZNF219Q9P2Y4 722 aaPredicted RBP14.25□□□□□ -0.13
CCDC38-202ENST00000546386 SMC3Q9UQE7 1217 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms