RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 SEPT11Q9NVA2 429 aaKnown RBP13.66□□□□□ -0.22
CHERP-203ENST00000546361 ERBB3P21860 1342 aa13.66□□□□□ -0.22
CHERP-203ENST00000546361 WDR17Q8IZU2 1322 aa13.66□□□□□ -0.22
CHERP-203ENST00000546361 CREB3L3Q68CJ9 461 aa13.66□□□□□ -0.22
CHERP-203ENST00000546361 USP44Q9H0E7 712 aa13.66□□□□□ -0.22
CHERP-203ENST00000546361 CCDC171Q6TFL3 1326 aa13.66□□□□□ -0.22
CHERP-203ENST00000546361 HEATR3Q7Z4Q2 680 aa13.65□□□□□ -0.22
CHERP-203ENST00000546361 FAM177A1Q8N128 213 aaPredicted RBP13.65□□□□□ -0.22
CHERP-203ENST00000546361 CCP110O43303 1012 aa13.65□□□□□ -0.22
CHERP-203ENST00000546361 BRINP3Q76B58 766 aa13.65□□□□□ -0.22
CHERP-203ENST00000546361 DHX32Q7L7V1 743 aaKnown RBP13.65□□□□□ -0.22
CHERP-203ENST00000546361 ZSCAN16Q9H4T2 348 aaPredicted RBP13.65□□□□□ -0.22
CHERP-203ENST00000546361 LMOD1P29536 600 aaPredicted RBP13.65□□□□□ -0.22
CHERP-203ENST00000546361 CCDC183Q5T5S1 534 aa13.65□□□□□ -0.22
CHERP-203ENST00000546361 WDR66Q8TBY9 1149 aa13.65□□□□□ -0.22
CHERP-203ENST00000546361 BIN1O00499 593 aa13.64□□□□□ -0.23
CHERP-203ENST00000546361 MSL1Q68DK7 614 aa13.64□□□□□ -0.23
CHERP-203ENST00000546361 CCDC148Q8NFR7 591 aa13.64□□□□□ -0.23
CHERP-203ENST00000546361 USP6P35125 1406 aa13.64□□□□□ -0.23
CHERP-203ENST00000546361 ARGLU1Q9NWB6 273 aaPredicted RBP13.64□□□□□ -0.23
CHERP-203ENST00000546361 AATKQ6ZMQ8 1374 aa13.64□□□□□ -0.23
CHERP-203ENST00000546361 KIF20AO95235 890 aa13.64□□□□□ -0.23
CHERP-203ENST00000546361 RDXP35241 583 aaKnown RBP13.64□□□□□ -0.23
CHERP-203ENST00000546361 RUFY1Q96T51 708 aa13.64□□□□□ -0.23
CHERP-203ENST00000546361 IGSF1Q8N6C5 1336 aa13.64□□□□□ -0.23
CHERP-203ENST00000546361 PRDM15P57071 1507 aaPredicted RBP13.64□□□□□ -0.23
CHERP-203ENST00000546361 CTAGE5O15320 804 aa13.64□□□□□ -0.23
CHERP-203ENST00000546361 TRIM37O94972 964 aa13.64□□□□□ -0.23
CHERP-203ENST00000546361 NAPAP54920 295 aa13.64□□□□□ -0.23
CHERP-203ENST00000546361 FLAD1Q8NFF5 587 aa13.64□□□□□ -0.23
CHERP-203ENST00000546361 DDX19AQ9NUU7 478 aaKnown RBP13.64□□□□□ -0.23
CHERP-203ENST00000546361 HECW2Q9P2P5 1572 aa13.63□□□□□ -0.23
CHERP-203ENST00000546361 LIG1P18858 919 aa13.63□□□□□ -0.23
CHERP-203ENST00000546361 TNNI2P48788 182 aa13.63□□□□□ -0.23
CHERP-203ENST00000546361 CCDC102BQ68D86 513 aa13.63□□□□□ -0.23
CHERP-203ENST00000546361 APPBP2Q92624 585 aa13.63□□□□□ -0.23
CHERP-203ENST00000546361 ERBB4Q15303 1308 aa13.63□□□□□ -0.23
CHERP-203ENST00000546361 FAM135BQ49AJ0 1406 aa13.63□□□□□ -0.23
CHERP-203ENST00000546361 RAD50Q92878 1312 aa13.63□□□□□ -0.23
CHERP-203ENST00000546361 AMPD3Q01432 767 aa13.63□□□□□ -0.23
CHERP-203ENST00000546361 TSG101Q99816 390 aa13.63□□□□□ -0.23
CHERP-203ENST00000546361 NDUFB9Q9Y6M9 179 aa13.63□□□□□ -0.23
CHERP-203ENST00000546361 APOBRQ0VD83 1088 aa13.62□□□□□ -0.23
CHERP-203ENST00000546361 FAM196AQ6ZSG2 479 aa13.62□□□□□ -0.23
CHERP-203ENST00000546361 ZKSCAN3Q9BRR0 538 aa13.62□□□□□ -0.23
CHERP-203ENST00000546361 KDM5CP41229 1560 aa13.62□□□□□ -0.23
CHERP-203ENST00000546361 CALM1P0DP23 149 aa13.62□□□□□ -0.23
CHERP-203ENST00000546361 CALM2P0DP24 149 aa13.62□□□□□ -0.23
CHERP-203ENST00000546361 CALM3P0DP25 149 aa13.62□□□□□ -0.23
CHERP-203ENST00000546361 ALDH1B1P30837 517 aa13.62□□□□□ -0.23
CHERP-203ENST00000546361 CCDC129Q6ZRS4 1044 aa13.62□□□□□ -0.23
CHERP-203ENST00000546361 KBTBD3Q8NAB2 608 aa13.62□□□□□ -0.23
CHERP-203ENST00000546361 HELLSQ9NRZ9 838 aa13.62□□□□□ -0.23
CHERP-203ENST00000546361 ZBTB1Q9Y2K1 713 aa13.62□□□□□ -0.23
CHERP-203ENST00000546361 ZSCAN22P10073 491 aaPredicted RBP13.62□□□□□ -0.23
CHERP-203ENST00000546361 RXRBP28702 533 aa13.62□□□□□ -0.23
CHERP-203ENST00000546361 RBM27Q9P2N5 1060 aaKnown RBP13.62□□□□□ -0.23
CHERP-203ENST00000546361 RXRAP19793 462 aa13.61□□□□□ -0.23
CHERP-203ENST00000546361 KCNQ4P56696 695 aa13.61□□□□□ -0.23
CHERP-203ENST00000546361 ARMT1Q9H993 441 aa13.61□□□□□ -0.23
CHERP-203ENST00000546361 SAP30BPQ9UHR5 308 aaKnown RBP13.61□□□□□ -0.23
CHERP-203ENST00000546361 GPAA1O43292 621 aa13.61□□□□□ -0.23
CHERP-203ENST00000546361 PRDM1O75626 825 aa13.61□□□□□ -0.23
CHERP-203ENST00000546361 AK2P54819 239 aa13.61□□□□□ -0.23
CHERP-203ENST00000546361 PLS1Q14651 629 aa13.61□□□□□ -0.23
CHERP-203ENST00000546361 USPL1Q5W0Q7 1092 aa13.61□□□□□ -0.23
CHERP-203ENST00000546361 NLGN1Q8N2Q7 840 aa13.61□□□□□ -0.23
CHERP-203ENST00000546361 SMARCC2Q8TAQ2 1214 aa13.61□□□□□ -0.23
CHERP-203ENST00000546361 DIP2BQ9P265 1576 aa13.61□□□□□ -0.23
CHERP-203ENST00000546361 ZNF772Q68DY9 489 aaPredicted RBP13.61□□□□□ -0.23
CHERP-203ENST00000546361 EPB41L2O43491 1005 aaKnown RBP13.61□□□□□ -0.23
CHERP-203ENST00000546361 TXLNBQ8N3L3 684 aa13.61□□□□□ -0.23
CHERP-203ENST00000546361 KRI1Q8N9T8 703 aaKnown RBP13.61□□□□□ -0.23
CHERP-203ENST00000546361 MPHOSPH6Q99547 160 aaKnown RBP13.61□□□□□ -0.23
CHERP-203ENST00000546361 FGFR1OPO95684 399 aaKnown RBP13.6□□□□□ -0.23
CHERP-203ENST00000546361 BMP15O95972 392 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 CALML3P27482 149 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 CRKLP46109 303 aaKnown RBP13.6□□□□□ -0.23
CHERP-203ENST00000546361 EIF6P56537 245 aaKnown RBP13.6□□□□□ -0.23
CHERP-203ENST00000546361 RAB3GAP1Q15042 981 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 FKBP15Q5T1M5 1219 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 ISM2Q6H9L7 571 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 INO80Q9ULG1 1556 aaPredicted RBP13.6□□□□□ -0.23
CHERP-203ENST00000546361 MROH5Q6ZUA9 1318 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 B4E1Z4 1266 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 CPA1P15085 419 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 ZAP70P43403 619 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 CTSWP56202 376 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 C8orf34Q49A92 452 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 HSP90B2PQ58FF3 399 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 ZBTB38Q8NAP3 1195 aaPredicted RBP13.6□□□□□ -0.23
CHERP-203ENST00000546361 MYOM2P54296 1465 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 TET3O43151 1660 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 TCERG1LQ5VWI1 586 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 CACNA2D4Q7Z3S7 1137 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 FAM227BQ96M60 508 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 C6orf50Q9HD87 102 aa13.6□□□□□ -0.23
CHERP-203ENST00000546361 ARHGAP31Q2M1Z3 1444 aa13.59□□□□□ -0.23
CHERP-203ENST00000546361 ECM2O94769 699 aaPredicted RBP13.59□□□□□ -0.23
CHERP-203ENST00000546361 SFPQP23246 707 aaKnown RBP eCLIP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms