RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 EDC4Q6P2E9 1401 aaKnown RBP13.96□□□□□ -0.17
NPC1L1-204ENST00000546276 UHRF1BP1LA0JNW5 1464 aa13.96□□□□□ -0.17
NPC1L1-204ENST00000546276 TFCP2Q12800 502 aa13.96□□□□□ -0.17
NPC1L1-204ENST00000546276 ATP2B3Q16720 1220 aa13.96□□□□□ -0.17
NPC1L1-204ENST00000546276 LLPHQ9BRT6 129 aaKnown RBP13.96□□□□□ -0.17
NPC1L1-204ENST00000546276 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.96□□□□□ -0.17
NPC1L1-204ENST00000546276 BABAM1Q9NWV8 329 aa13.96□□□□□ -0.17
NPC1L1-204ENST00000546276 RSPH14Q9UHP6 348 aa13.96□□□□□ -0.17
NPC1L1-204ENST00000546276 SSH2Q76I76 1423 aa13.96□□□□□ -0.17
NPC1L1-204ENST00000546276 ASXL2Q76L83 1435 aa13.96□□□□□ -0.17
NPC1L1-204ENST00000546276 SLC39A6Q13433 755 aa13.96□□□□□ -0.18
NPC1L1-204ENST00000546276 KARSQ15046 597 aaKnown RBP13.96□□□□□ -0.18
NPC1L1-204ENST00000546276 DYDC1Q8WWB3 177 aa13.96□□□□□ -0.18
NPC1L1-204ENST00000546276 CALML4Q96GE6 196 aa13.96□□□□□ -0.18
NPC1L1-204ENST00000546276 BICC1Q9H694 974 aaKnown RBP13.96□□□□□ -0.18
NPC1L1-204ENST00000546276 MAP3K19Q56UN5 1328 aa13.96□□□□□ -0.18
NPC1L1-204ENST00000546276 AKR1B10O60218 316 aa13.96□□□□□ -0.18
NPC1L1-204ENST00000546276 GTF3C6Q969F1 213 aa13.96□□□□□ -0.18
NPC1L1-204ENST00000546276 ZNF652Q9Y2D9 606 aa13.96□□□□□ -0.18
NPC1L1-204ENST00000546276 AEBP2Q6ZN18 517 aaPredicted RBP13.95□□□□□ -0.18
NPC1L1-204ENST00000546276 DHX37Q8IY37 1157 aaKnown RBP13.95□□□□□ -0.18
NPC1L1-204ENST00000546276 ZNF444Q8N0Y2 327 aaPredicted RBP13.95□□□□□ -0.18
NPC1L1-204ENST00000546276 BCCIPQ9P287 314 aaKnown RBP eCLIP13.95□□□□□ -0.18
NPC1L1-204ENST00000546276 TNRQ92752 1358 aa13.95□□□□□ -0.18
NPC1L1-204ENST00000546276 HSF2BPO75031 334 aa13.95□□□□□ -0.18
NPC1L1-204ENST00000546276 ZNF76P36508 570 aa13.95□□□□□ -0.18
NPC1L1-204ENST00000546276 TEX13AQ9BXU3 409 aaPredicted RBP13.95□□□□□ -0.18
NPC1L1-204ENST00000546276 BCL2L12Q9HB09 334 aa13.95□□□□□ -0.18
NPC1L1-204ENST00000546276 KIAA0232Q92628 1395 aa13.95□□□□□ -0.18
NPC1L1-204ENST00000546276 ELP1O95163 1332 aa13.95□□□□□ -0.18
NPC1L1-204ENST00000546276 EVCP57679 992 aa13.95□□□□□ -0.18
NPC1L1-204ENST00000546276 DZIP1Q86YF9 867 aaKnown RBP13.95□□□□□ -0.18
NPC1L1-204ENST00000546276 ABCA5Q8WWZ7 1642 aa13.95□□□□□ -0.18
NPC1L1-204ENST00000546276 IDEP14735 1019 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 BICDL1Q6ZP65 573 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 CCDC113Q9H0I3 377 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 LZTFL1Q9NQ48 299 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 SBNO2Q9Y2G9 1366 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 TRIM75PA6NK02 468 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 TUBBP07437 444 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 MAP2K1Q02750 393 aaPredicted RBP13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 CCDC40Q4G0X9 1142 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 CDC37L1Q7L3B6 337 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 MAATS1Q7Z4T9 603 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 DHX58Q96C10 678 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 BAG1Q99933 345 aaPredicted RBP13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 TM6SF1Q9BZW5 370 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 SLC9C2Q5TAH2 1124 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 PLXNC1O60486 1568 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 SYNMO15061 1565 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 SPECC1Q5M775 1068 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 KRT28Q7Z3Y7 464 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 FAM227BQ96M60 508 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 HELLSQ9NRZ9 838 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 VPS18Q9P253 973 aa13.94□□□□□ -0.18
NPC1L1-204ENST00000546276 IMPACTQ9P2X3 320 aa13.93□□□□□ -0.18
NPC1L1-204ENST00000546276 PUF60Q9UHX1 559 aaKnown RBP13.93□□□□□ -0.18
NPC1L1-204ENST00000546276 IBTKQ9P2D0 1353 aaPredicted RBP13.93□□□□□ -0.18
NPC1L1-204ENST00000546276 NBPF7P0C2Y1 421 aaPredicted RBP13.93□□□□□ -0.18
NPC1L1-204ENST00000546276 ELF2Q15723 593 aa13.93□□□□□ -0.18
NPC1L1-204ENST00000546276 CCDC96Q2M329 555 aa13.93□□□□□ -0.18
NPC1L1-204ENST00000546276 ZNF569Q5MCW4 686 aa13.93□□□□□ -0.18
NPC1L1-204ENST00000546276 ESR2Q92731 530 aa13.93□□□□□ -0.18
NPC1L1-204ENST00000546276 EXOC1Q9NV70 894 aa13.93□□□□□ -0.18
NPC1L1-204ENST00000546276 NCKAP5LQ9HCH0 1330 aa13.93□□□□□ -0.18
NPC1L1-204ENST00000546276 STAT6P42226 847 aa13.93□□□□□ -0.18
NPC1L1-204ENST00000546276 EIF4G3O43432 1585 aaKnown RBP13.93□□□□□ -0.18
NPC1L1-204ENST00000546276 USP19O94966 1318 aa13.93□□□□□ -0.18
NPC1L1-204ENST00000546276 CEBPAP49715 358 aaPredicted RBP13.93□□□□□ -0.18
NPC1L1-204ENST00000546276 ANKRD18AQ8IVF6 992 aa13.93□□□□□ -0.18
NPC1L1-204ENST00000546276 TSPY2A6NKD2 308 aa13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 HOXB7P09629 217 aa13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 KRT83P78385 493 aa13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 NUTM2AQ8IVF1 878 aaPredicted RBP13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 KAT14Q9H8E8 782 aa13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 GOPCQ9HD26 462 aa13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 PALD1Q9ULE6 856 aa13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 TMCO5BA8MYB1 307 aa13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 PSMA7O14818 248 aa13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 CD2BP2O95400 341 aaKnown RBP13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 PDE4BQ07343 736 aa13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 KRI1Q8N9T8 703 aaKnown RBP13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 IBSPP21815 317 aaPredicted RBP13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 TSC1Q92574 1164 aa13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 KRT86O43790 486 aa13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 PPP2R3AQ06190 1150 aa13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 PLEKHF1Q96S99 279 aa13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 UBA5Q9GZZ9 404 aa13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 ARHGEF5Q12774 1597 aa13.92□□□□□ -0.18
NPC1L1-204ENST00000546276 OPA1O60313 960 aa13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 TACC1O75410 805 aa13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 HOXC9P31274 260 aa13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 MNAT1P51948 309 aa13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 NBPF11Q86T75 865 aa13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 BBXQ8WY36 941 aaPredicted RBP13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 GCOM1H8Y6P7 765 aaPredicted RBP13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 MYZAPP0CAP1 466 aa13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 STX17P56962 302 aa13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 HDXQ7Z353 690 aa13.91□□□□□ -0.18
NPC1L1-204ENST00000546276 DDX21Q9NR30 783 aaKnown RBP eCLIP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms