RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 SNRKQ9NRH2 765 aa23.49■■□□□ 1.35
SKP2-208ENST00000546211 MCCP23508 829 aa23.48■■□□□ 1.35
SKP2-208ENST00000546211 MCAMP43121 646 aa23.48■■□□□ 1.35
SKP2-208ENST00000546211 ZAP70P43403 619 aa23.48■■□□□ 1.35
SKP2-208ENST00000546211 FAM227BQ96M60 508 aa23.48■■□□□ 1.35
SKP2-208ENST00000546211 CRAMP1Q96RY5 1269 aa23.48■■□□□ 1.35
SKP2-208ENST00000546211 PDE6BP35913 854 aa23.47■■□□□ 1.35
SKP2-208ENST00000546211 TTF1Q15361 905 aaPredicted RBP23.47■■□□□ 1.35
SKP2-208ENST00000546211 ANTXR1Q9H6X2 564 aa23.47■■□□□ 1.35
SKP2-208ENST00000546211 A0A0D9SFI3 127 aa23.46■■□□□ 1.35
SKP2-208ENST00000546211 BBOX1O75936 387 aa23.46■■□□□ 1.35
SKP2-208ENST00000546211 CAVIN4Q5BKX8 364 aa23.46■■□□□ 1.35
SKP2-208ENST00000546211 BCAMP50895 628 aa23.45■■□□□ 1.34
SKP2-208ENST00000546211 DAXXQ9UER7 740 aaPredicted RBP23.45■■□□□ 1.34
SKP2-208ENST00000546211 ANKRD31Q8N7Z5 1873 aa23.44■■□□□ 1.34
SKP2-208ENST00000546211 BECN1Q14457 450 aa23.44■■□□□ 1.34
SKP2-208ENST00000546211 PI16Q6UXB8 463 aa23.44■■□□□ 1.34
SKP2-208ENST00000546211 LSG1Q9H089 658 aaKnown RBP23.44■■□□□ 1.34
SKP2-208ENST00000546211 GNL3LQ9NVN8 582 aaKnown RBP23.44■■□□□ 1.34
SKP2-208ENST00000546211 TMC4Q7Z404 712 aa23.44■■□□□ 1.34
SKP2-208ENST00000546211 SPATA5Q8NB90 893 aa23.44■■□□□ 1.34
SKP2-208ENST00000546211 HMG20BQ9P0W2 317 aa23.44■■□□□ 1.34
SKP2-208ENST00000546211 ANKIB1Q9P2G1 1089 aa23.44■■□□□ 1.34
SKP2-208ENST00000546211 ZNF804BA4D1E1 1349 aa23.43■■□□□ 1.34
SKP2-208ENST00000546211 XDHP47989 1333 aa23.43■■□□□ 1.34
SKP2-208ENST00000546211 RNF113AO15541 343 aaKnown RBP23.43■■□□□ 1.34
SKP2-208ENST00000546211 ZFYP08048 801 aaPredicted RBP23.43■■□□□ 1.34
SKP2-208ENST00000546211 NPR1P16066 1061 aa23.43■■□□□ 1.34
SKP2-208ENST00000546211 VPS37DQ86XT2 251 aa23.43■■□□□ 1.34
SKP2-208ENST00000546211 KIF2CQ99661 725 aa23.43■■□□□ 1.34
SKP2-208ENST00000546211 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.43■■□□□ 1.34
SKP2-208ENST00000546211 LEMD3Q9Y2U8 911 aa23.43■■□□□ 1.34
SKP2-208ENST00000546211 MED23Q9ULK4 1368 aa23.42■■□□□ 1.34
SKP2-208ENST00000546211 CYP2E1P05181 493 aaPredicted RBP23.42■■□□□ 1.34
SKP2-208ENST00000546211 SRGNP10124 158 aa23.42■■□□□ 1.34
SKP2-208ENST00000546211 GYG1P46976 350 aa23.42■■□□□ 1.34
SKP2-208ENST00000546211 RASGRF1Q13972 1273 aa23.42■■□□□ 1.34
SKP2-208ENST00000546211 MCMDC2Q4G0Z9 681 aa23.42■■□□□ 1.34
SKP2-208ENST00000546211 SLC16A10Q8TF71 515 aa23.42■■□□□ 1.34
SKP2-208ENST00000546211 HELLSQ9NRZ9 838 aa23.42■■□□□ 1.34
SKP2-208ENST00000546211 ZSCAN25Q6NSZ9 544 aa23.41■■□□□ 1.34
SKP2-208ENST00000546211 AKAP11Q9UKA4 1901 aa23.41■■□□□ 1.34
SKP2-208ENST00000546211 CCDC171Q6TFL3 1326 aa23.41■■□□□ 1.34
SKP2-208ENST00000546211 WTIPA6NIX2 430 aaPredicted RBP23.4■■□□□ 1.34
SKP2-208ENST00000546211 ALDH1B1P30837 517 aa23.4■■□□□ 1.34
SKP2-208ENST00000546211 PPEF1O14829 653 aaPredicted RBP23.4■■□□□ 1.34
SKP2-208ENST00000546211 ANAPC15P60006 121 aa23.4■■□□□ 1.34
SKP2-208ENST00000546211 RABEP1Q15276 862 aa23.4■■□□□ 1.34
SKP2-208ENST00000546211 ZMYM1Q5SVZ6 1142 aa23.4■■□□□ 1.34
SKP2-208ENST00000546211 MASTLQ96GX5 879 aa23.4■■□□□ 1.34
SKP2-208ENST00000546211 FAM84BQ96KN1 310 aaPredicted RBP23.4■■□□□ 1.34
SKP2-208ENST00000546211 HSPA4P34932 840 aa23.39■■□□□ 1.33
SKP2-208ENST00000546211 PDGFDQ9GZP0 370 aaPredicted RBP23.39■■□□□ 1.33
SKP2-208ENST00000546211 PIH1D3Q9NQM4 214 aaKnown RBP23.39■■□□□ 1.33
SKP2-208ENST00000546211 ATP2B4P23634 1241 aa23.38■■□□□ 1.33
SKP2-208ENST00000546211 HIBADHP31937 336 aaKnown RBP23.38■■□□□ 1.33
SKP2-208ENST00000546211 GPSM2P81274 684 aa23.38■■□□□ 1.33
SKP2-208ENST00000546211 PTH1RQ03431 593 aa23.38■■□□□ 1.33
SKP2-208ENST00000546211 FBXO33Q7Z6M2 555 aa23.38■■□□□ 1.33
SKP2-208ENST00000546211 ZNF589Q86UQ0 364 aaPredicted RBP23.38■■□□□ 1.33
SKP2-208ENST00000546211 SEMA3EO15041 775 aa23.37■■□□□ 1.33
SKP2-208ENST00000546211 IDH1O75874 414 aaKnown RBP23.37■■□□□ 1.33
SKP2-208ENST00000546211 CHGBP05060 677 aa23.37■■□□□ 1.33
SKP2-208ENST00000546211 C2CD5Q86YS7 1000 aa23.37■■□□□ 1.33
SKP2-208ENST00000546211 SP8Q8IXZ3 490 aa23.37■■□□□ 1.33
SKP2-208ENST00000546211 SEC62Q99442 399 aaKnown RBP23.37■■□□□ 1.33
SKP2-208ENST00000546211 DENND2AQ9ULE3 1009 aa23.37■■□□□ 1.33
SKP2-208ENST00000546211 NSFL1CQ9UNZ2 370 aaKnown RBP23.37■■□□□ 1.33
SKP2-208ENST00000546211 H0YIN7 160 aa23.36■■□□□ 1.33
SKP2-208ENST00000546211 KLRK1P26718 216 aa23.36■■□□□ 1.33
SKP2-208ENST00000546211 WASHC4Q2M389 1173 aa23.36■■□□□ 1.33
SKP2-208ENST00000546211 GGA1Q9UJY5 639 aa23.36■■□□□ 1.33
SKP2-208ENST00000546211 FRAT2O75474 233 aaPredicted RBP23.35■■□□□ 1.33
SKP2-208ENST00000546211 APPBP2Q92624 585 aa23.35■■□□□ 1.33
SKP2-208ENST00000546211 MAP4K1Q92918 833 aa23.35■■□□□ 1.33
SKP2-208ENST00000546211 PODXL2Q9NZ53 605 aa23.35■■□□□ 1.33
SKP2-208ENST00000546211 IQSEC3Q9UPP2 1182 aaPredicted RBP23.35■■□□□ 1.33
SKP2-208ENST00000546211 ATP6V0A2Q9Y487 856 aa23.35■■□□□ 1.33
SKP2-208ENST00000546211 COL11A2P13942 1736 aaPredicted RBP23.35■■□□□ 1.33
SKP2-208ENST00000546211 MAP3K12Q12852 859 aa23.35■■□□□ 1.33
SKP2-208ENST00000546211 SLC9C2Q5TAH2 1124 aa23.35■■□□□ 1.33
SKP2-208ENST00000546211 CCDC129Q6ZRS4 1044 aa23.35■■□□□ 1.33
SKP2-208ENST00000546211 HSCBQ8IWL3 235 aa23.35■■□□□ 1.33
SKP2-208ENST00000546211 ZNF622Q969S3 477 aaKnown RBP eCLIP23.35■■□□□ 1.33
SKP2-208ENST00000546211 SNX21Q969T3 373 aa23.35■■□□□ 1.33
SKP2-208ENST00000546211 TMX4Q9H1E5 349 aaPredicted RBP23.35■■□□□ 1.33
SKP2-208ENST00000546211 PALD1Q9ULE6 856 aa23.35■■□□□ 1.33
SKP2-208ENST00000546211 LRRC37AA6NMS7 1700 aa23.34■■□□□ 1.33
SKP2-208ENST00000546211 UFL1O94874 794 aa23.34■■□□□ 1.33
SKP2-208ENST00000546211 ADD2P35612 726 aa23.34■■□□□ 1.33
SKP2-208ENST00000546211 SLFNL1Q499Z3 407 aa23.34■■□□□ 1.33
SKP2-208ENST00000546211 STYK1Q6J9G0 422 aa23.34■■□□□ 1.33
SKP2-208ENST00000546211 C15orf52Q6ZUT6 534 aaKnown RBP23.34■■□□□ 1.33
SKP2-208ENST00000546211 SLC51AQ86UW1 340 aa23.34■■□□□ 1.33
SKP2-208ENST00000546211 TBC1D2Q9BYX2 928 aa23.34■■□□□ 1.33
SKP2-208ENST00000546211 RBM8AQ9Y5S9 174 aaKnown RBP23.34■■□□□ 1.33
SKP2-208ENST00000546211 MAST3O60307 1309 aa23.34■■□□□ 1.33
SKP2-208ENST00000546211 IRS2Q9Y4H2 1338 aa23.34■■□□□ 1.33
SKP2-208ENST00000546211 UBE3CQ15386 1083 aa23.33■■□□□ 1.33
SKP2-208ENST00000546211 IL17RAQ96F46 866 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms