RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 KCNJ4P48050 445 aa14.88□□□□□ -0.03
YBX3-217ENST00000546164 EAPPQ56P03 285 aaPredicted RBP14.88□□□□□ -0.03
YBX3-217ENST00000546164 TXNRD3Q86VQ6 643 aa14.88□□□□□ -0.03
YBX3-217ENST00000546164 MEIS3Q99687 375 aa14.88□□□□□ -0.03
YBX3-217ENST00000546164 SCN9AQ15858 1988 aa14.87□□□□□ -0.03
YBX3-217ENST00000546164 TAF5LO75529 589 aa14.87□□□□□ -0.03
YBX3-217ENST00000546164 GNAI3P08754 354 aa14.87□□□□□ -0.03
YBX3-217ENST00000546164 KLRK1P26718 216 aa14.87□□□□□ -0.03
YBX3-217ENST00000546164 RFX5P48382 616 aaPredicted RBP14.87□□□□□ -0.03
YBX3-217ENST00000546164 HELBQ8NG08 1087 aaPredicted RBP14.87□□□□□ -0.03
YBX3-217ENST00000546164 PUS3Q9BZE2 481 aaKnown RBP14.87□□□□□ -0.03
YBX3-217ENST00000546164 CNOT7Q9UIV1 285 aaKnown RBP14.87□□□□□ -0.03
YBX3-217ENST00000546164 TNNQ9UQP3 1299 aa14.87□□□□□ -0.03
YBX3-217ENST00000546164 ZBTB12Q9Y330 459 aaPredicted RBP14.87□□□□□ -0.03
YBX3-217ENST00000546164 MROH5Q6ZUA9 1318 aa14.87□□□□□ -0.03
YBX3-217ENST00000546164 USP17L3A6NCW0 530 aa14.86□□□□□ -0.03
YBX3-217ENST00000546164 USP17L4A6NCW7 530 aa14.86□□□□□ -0.03
YBX3-217ENST00000546164 UBE4AQ14139 1066 aa14.86□□□□□ -0.03
YBX3-217ENST00000546164 RSBN1LQ6PCB5 846 aaPredicted RBP14.86□□□□□ -0.03
YBX3-217ENST00000546164 USP17L1Q7RTZ2 530 aa14.86□□□□□ -0.03
YBX3-217ENST00000546164 AGBL3Q8NEM8 1001 aa14.86□□□□□ -0.03
YBX3-217ENST00000546164 LRRFIP2Q9Y608 721 aaKnown RBP14.86□□□□□ -0.03
YBX3-217ENST00000546164 PASKQ96RG2 1323 aa14.86□□□□□ -0.03
YBX3-217ENST00000546164 H7C1D1 291 aa14.85□□□□□ -0.03
YBX3-217ENST00000546164 SNAP23O00161 211 aa14.85□□□□□ -0.03
YBX3-217ENST00000546164 ITGBL1O95965 494 aaPredicted RBP14.85□□□□□ -0.03
YBX3-217ENST00000546164 PTPN12Q05209 780 aaKnown RBP14.85□□□□□ -0.03
YBX3-217ENST00000546164 MTX1Q13505 466 aa14.85□□□□□ -0.03
YBX3-217ENST00000546164 STRIP1Q5VSL9 837 aa14.85□□□□□ -0.03
YBX3-217ENST00000546164 MICALL2Q8IY33 904 aa14.85□□□□□ -0.03
YBX3-217ENST00000546164 ZC3H15Q8WU90 426 aaKnown RBP14.85□□□□□ -0.03
YBX3-217ENST00000546164 CLUAP1Q96AJ1 413 aa14.85□□□□□ -0.03
YBX3-217ENST00000546164 GMLQ99445 158 aa14.85□□□□□ -0.03
YBX3-217ENST00000546164 PGAP2Q9UHJ9 254 aa14.85□□□□□ -0.03
YBX3-217ENST00000546164 FBXO3Q9UK99 471 aa14.85□□□□□ -0.03
YBX3-217ENST00000546164 CLEC11AQ9Y240 323 aa14.85□□□□□ -0.03
YBX3-217ENST00000546164 A0A1B0GUL6 1792 aa14.85□□□□□ -0.03
YBX3-217ENST00000546164 PSME4Q14997 1843 aa14.85□□□□□ -0.03
YBX3-217ENST00000546164 EYA2O00167 538 aa14.84□□□□□ -0.03
YBX3-217ENST00000546164 ZNF280AP59817 542 aaPredicted RBP14.84□□□□□ -0.03
YBX3-217ENST00000546164 LRRC24Q50LG9 513 aa14.84□□□□□ -0.03
YBX3-217ENST00000546164 DACT2Q5SW24 774 aa14.84□□□□□ -0.03
YBX3-217ENST00000546164 CNTROBQ8N137 903 aa14.84□□□□□ -0.03
YBX3-217ENST00000546164 TMEM57Q8N5G2 664 aa14.84□□□□□ -0.03
YBX3-217ENST00000546164 VGLL2Q8N8G2 317 aa14.84□□□□□ -0.03
YBX3-217ENST00000546164 TRPM4Q8TD43 1214 aa14.84□□□□□ -0.03
YBX3-217ENST00000546164 CD209Q9NNX6 404 aa14.84□□□□□ -0.03
YBX3-217ENST00000546164 SHTN1A0MZ66 631 aa14.83□□□□□ -0.04
YBX3-217ENST00000546164 PLIN1O60240 522 aa14.83□□□□□ -0.04
YBX3-217ENST00000546164 IL1R1P14778 569 aa14.83□□□□□ -0.04
YBX3-217ENST00000546164 HIRAP54198 1017 aaPredicted RBP14.83□□□□□ -0.04
YBX3-217ENST00000546164 MAP1SQ66K74 1059 aaPredicted RBP14.83□□□□□ -0.04
YBX3-217ENST00000546164 ZNF804AQ7Z570 1209 aa14.83□□□□□ -0.04
YBX3-217ENST00000546164 DZIP1LQ8IYY4 767 aaKnown RBP14.83□□□□□ -0.04
YBX3-217ENST00000546164 KLHDC4Q8TBB5 520 aa14.83□□□□□ -0.04
YBX3-217ENST00000546164 MYO3BQ8WXR4 1341 aa14.83□□□□□ -0.04
YBX3-217ENST00000546164 CIAO1O76071 339 aa14.82□□□□□ -0.04
YBX3-217ENST00000546164 PDE8BO95263 885 aa14.82□□□□□ -0.04
YBX3-217ENST00000546164 GNAI2P04899 355 aa14.82□□□□□ -0.04
YBX3-217ENST00000546164 MMP14P50281 582 aa14.82□□□□□ -0.04
YBX3-217ENST00000546164 METTL24Q5JXM2 366 aa14.82□□□□□ -0.04
YBX3-217ENST00000546164 FTSJ3Q8IY81 847 aaKnown RBP14.82□□□□□ -0.04
YBX3-217ENST00000546164 COPRSQ9NQ92 184 aa14.82□□□□□ -0.04
YBX3-217ENST00000546164 USP17L8P0C7I0 530 aa14.81□□□□□ -0.04
YBX3-217ENST00000546164 RLBP1P12271 317 aa14.81□□□□□ -0.04
YBX3-217ENST00000546164 TTLL5Q6EMB2 1281 aa14.81□□□□□ -0.04
YBX3-217ENST00000546164 ATG9AQ7Z3C6 839 aa14.81□□□□□ -0.04
YBX3-217ENST00000546164 SAMD7Q7Z3H4 446 aa14.81□□□□□ -0.04
YBX3-217ENST00000546164 DNAJC5GQ8N7S2 189 aa14.81□□□□□ -0.04
YBX3-217ENST00000546164 EGFRP00533 1210 aa14.8□□□□□ -0.04
YBX3-217ENST00000546164 FGFR2P21802 821 aa14.8□□□□□ -0.04
YBX3-217ENST00000546164 TBC1D10BQ4KMP7 808 aaPredicted RBP14.8□□□□□ -0.04
YBX3-217ENST00000546164 FAM84BQ96KN1 310 aaPredicted RBP14.8□□□□□ -0.04
YBX3-217ENST00000546164 CREBZFQ9NS37 354 aa14.8□□□□□ -0.04
YBX3-217ENST00000546164 RCAN3Q9UKA8 241 aa14.8□□□□□ -0.04
YBX3-217ENST00000546164 ZNF646O15015 1829 aaPredicted RBP14.8□□□□□ -0.04
YBX3-217ENST00000546164 SRGAP3O43295 1099 aa14.79□□□□□ -0.04
YBX3-217ENST00000546164 SASH1O94885 1247 aa14.79□□□□□ -0.04
YBX3-217ENST00000546164 MS4A1P11836 297 aa14.79□□□□□ -0.04
YBX3-217ENST00000546164 HIBADHP31937 336 aaKnown RBP14.79□□□□□ -0.04
YBX3-217ENST00000546164 IL15P40933 162 aaPredicted RBP14.79□□□□□ -0.04
YBX3-217ENST00000546164 FKBP1AP62942 108 aaKnown RBP14.79□□□□□ -0.04
YBX3-217ENST00000546164 GTF2IP78347 998 aa14.79□□□□□ -0.04
YBX3-217ENST00000546164 HTRA3P83110 453 aa14.79□□□□□ -0.04
YBX3-217ENST00000546164 PUM3Q15397 648 aaKnown RBP14.79□□□□□ -0.04
YBX3-217ENST00000546164 KIF4BQ2VIQ3 1234 aa14.79□□□□□ -0.04
YBX3-217ENST00000546164 FBXO33Q7Z6M2 555 aa14.79□□□□□ -0.04
YBX3-217ENST00000546164 TDRD7Q8NHU6 1098 aaKnown RBP14.79□□□□□ -0.04
YBX3-217ENST00000546164 FAM205AQ6ZU69 1335 aa14.78□□□□□ -0.04
YBX3-217ENST00000546164 ZBTB7BO15156 539 aaPredicted RBP14.78□□□□□ -0.04
YBX3-217ENST00000546164 GYG1P46976 350 aa14.78□□□□□ -0.04
YBX3-217ENST00000546164 CDC37L1Q7L3B6 337 aa14.78□□□□□ -0.04
YBX3-217ENST00000546164 MXD3Q9BW11 206 aa14.78□□□□□ -0.04
YBX3-217ENST00000546164 MYOZ2Q9NPC6 264 aa14.78□□□□□ -0.04
YBX3-217ENST00000546164 TMEM88BA6NKF7 163 aa14.77□□□□□ -0.05
YBX3-217ENST00000546164 IFIT1P09914 478 aaKnown RBP14.77□□□□□ -0.05
YBX3-217ENST00000546164 ITPRIPQ8IWB1 547 aa14.77□□□□□ -0.05
YBX3-217ENST00000546164 OGFOD1Q8N543 542 aa14.77□□□□□ -0.05
YBX3-217ENST00000546164 LPIN2Q92539 896 aa14.77□□□□□ -0.05
YBX3-217ENST00000546164 FBXW7Q969H0 707 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms