RNA–Protein interactions for RNA: ENST00000545361.5

CYB561A3-220, Transcript of cytochrome b561 family member A3, humanhuman

TSL 4

Gene CYB561A3, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-220ENST00000545361 CHPF2Q9P2E5 772 aa13.31□□□□□ -0.28
CYB561A3-220ENST00000545361 TRIM17Q9Y577 477 aa13.31□□□□□ -0.28
CYB561A3-220ENST00000545361 PSME4Q14997 1843 aa13.31□□□□□ -0.28
CYB561A3-220ENST00000545361 USP17L3A6NCW0 530 aa13.3□□□□□ -0.28
CYB561A3-220ENST00000545361 USP17L4A6NCW7 530 aa13.3□□□□□ -0.28
CYB561A3-220ENST00000545361 NF2P35240 595 aa13.3□□□□□ -0.28
CYB561A3-220ENST00000545361 PTPN12Q05209 780 aaKnown RBP13.3□□□□□ -0.28
CYB561A3-220ENST00000545361 KRT24Q2M2I5 525 aa13.3□□□□□ -0.28
CYB561A3-220ENST00000545361 INTS3Q68E01 1043 aaKnown RBP13.3□□□□□ -0.28
CYB561A3-220ENST00000545361 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
CYB561A3-220ENST00000545361 USP17L1Q7RTZ2 530 aa13.3□□□□□ -0.28
CYB561A3-220ENST00000545361 BABAM1Q9NWV8 329 aa13.3□□□□□ -0.28
CYB561A3-220ENST00000545361 KIAA0100Q14667 2235 aaKnown RBP13.29□□□□□ -0.28
CYB561A3-220ENST00000545361 RIPK4P57078 832 aa13.29□□□□□ -0.28
CYB561A3-220ENST00000545361 PRKG1Q13976 671 aa13.29□□□□□ -0.28
CYB561A3-220ENST00000545361 OTOP1Q7RTM1 612 aa13.29□□□□□ -0.28
CYB561A3-220ENST00000545361 PNNQ9H307 717 aaKnown RBP13.29□□□□□ -0.28
CYB561A3-220ENST00000545361 ALDH1A1P00352 501 aa13.28□□□□□ -0.28
CYB561A3-220ENST00000545361 SPRYD7Q5W111 196 aa13.28□□□□□ -0.28
CYB561A3-220ENST00000545361 ARMC9Q7Z3E5 817 aa13.28□□□□□ -0.28
CYB561A3-220ENST00000545361 SZT2Q5T011 3432 aa13.27□□□□□ -0.28
CYB561A3-220ENST00000545361 WNT10BO00744 389 aa13.27□□□□□ -0.29
CYB561A3-220ENST00000545361 HDGFL1Q5TGJ6 251 aa13.27□□□□□ -0.29
CYB561A3-220ENST00000545361 PODNQ7Z5L7 613 aa13.27□□□□□ -0.29
CYB561A3-220ENST00000545361 OGFOD1Q8N543 542 aa13.27□□□□□ -0.29
CYB561A3-220ENST00000545361 MXD3Q9BW11 206 aa13.27□□□□□ -0.29
CYB561A3-220ENST00000545361 XDHP47989 1333 aa13.27□□□□□ -0.29
CYB561A3-220ENST00000545361 RBBP6Q7Z6E9 1792 aaKnown RBP13.27□□□□□ -0.29
CYB561A3-220ENST00000545361 SASH1O94885 1247 aa13.26□□□□□ -0.29
CYB561A3-220ENST00000545361 EN2P19622 333 aaPredicted RBP13.26□□□□□ -0.29
CYB561A3-220ENST00000545361 TRIM28Q13263 835 aaKnown RBP13.26□□□□□ -0.29
CYB561A3-220ENST00000545361 LDLRAD1Q5T700 205 aa13.26□□□□□ -0.29
CYB561A3-220ENST00000545361 IFNL1Q8IU54 200 aa13.26□□□□□ -0.29
CYB561A3-220ENST00000545361 ZBTB38Q8NAP3 1195 aaPredicted RBP13.26□□□□□ -0.29
CYB561A3-220ENST00000545361 CCDC85AQ96PX6 553 aaPredicted RBP13.26□□□□□ -0.29
CYB561A3-220ENST00000545361 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
CYB561A3-220ENST00000545361 CEP290O15078 2479 aa13.25□□□□□ -0.29
CYB561A3-220ENST00000545361 WTIPA6NIX2 430 aaPredicted RBP13.25□□□□□ -0.29
CYB561A3-220ENST00000545361 ATP2B4P23634 1241 aa13.25□□□□□ -0.29
CYB561A3-220ENST00000545361 LMOD3Q0VAK6 560 aa13.25□□□□□ -0.29
CYB561A3-220ENST00000545361 CCDC152Q4G0S7 254 aa13.25□□□□□ -0.29
CYB561A3-220ENST00000545361 DACT2Q5SW24 774 aa13.25□□□□□ -0.29
CYB561A3-220ENST00000545361 FBXW7Q969H0 707 aa13.25□□□□□ -0.29
CYB561A3-220ENST00000545361 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.25□□□□□ -0.29
CYB561A3-220ENST00000545361 DBF4Q9UBU7 674 aaPredicted RBP13.25□□□□□ -0.29
CYB561A3-220ENST00000545361 ANGEL1Q9UNK9 670 aaKnown RBP13.25□□□□□ -0.29
CYB561A3-220ENST00000545361 FZD1Q9UP38 647 aa13.25□□□□□ -0.29
CYB561A3-220ENST00000545361 COLQQ9Y215 455 aaPredicted RBP13.25□□□□□ -0.29
CYB561A3-220ENST00000545361 PTPN22Q9Y2R2 807 aa13.25□□□□□ -0.29
CYB561A3-220ENST00000545361 TRIOBPQ9H2D6 2365 aa13.25□□□□□ -0.29
CYB561A3-220ENST00000545361 MANSC4A6NHS7 340 aaPredicted RBP13.24□□□□□ -0.29
CYB561A3-220ENST00000545361 IGF2BP3O00425 579 aaKnown RBP eCLIP13.24□□□□□ -0.29
CYB561A3-220ENST00000545361 CHL1O00533 1208 aa13.24□□□□□ -0.29
CYB561A3-220ENST00000545361 HSP90B1P14625 803 aaKnown RBP13.24□□□□□ -0.29
CYB561A3-220ENST00000545361 INHBEP58166 350 aa13.24□□□□□ -0.29
CYB561A3-220ENST00000545361 APOBEC3FQ8IUX4 373 aaKnown RBP13.24□□□□□ -0.29
CYB561A3-220ENST00000545361 ANKRD18AQ8IVF6 992 aa13.24□□□□□ -0.29
CYB561A3-220ENST00000545361 ARMC5Q96C12 935 aa13.24□□□□□ -0.29
CYB561A3-220ENST00000545361 ERO1AQ96HE7 468 aa13.24□□□□□ -0.29
CYB561A3-220ENST00000545361 MED23Q9ULK4 1368 aa13.23□□□□□ -0.29
CYB561A3-220ENST00000545361 MYO3BQ8WXR4 1341 aa13.23□□□□□ -0.29
CYB561A3-220ENST00000545361 ECM2O94769 699 aaPredicted RBP13.23□□□□□ -0.29
CYB561A3-220ENST00000545361 TMPOP42166 694 aaKnown RBP13.23□□□□□ -0.29
CYB561A3-220ENST00000545361 CD99L2Q8TCZ2 262 aa13.23□□□□□ -0.29
CYB561A3-220ENST00000545361 SLC10A4Q96EP9 437 aa13.23□□□□□ -0.29
CYB561A3-220ENST00000545361 HYPKQ9NX55 129 aa13.23□□□□□ -0.29
CYB561A3-220ENST00000545361 LAS1LQ9Y4W2 734 aaKnown RBP13.23□□□□□ -0.29
CYB561A3-220ENST00000545361 ZNF646O15015 1829 aaPredicted RBP13.23□□□□□ -0.29
CYB561A3-220ENST00000545361 RANBP2P49792 3224 aaKnown RBP13.22□□□□□ -0.29
CYB561A3-220ENST00000545361 PDE8AO60658 829 aa13.22□□□□□ -0.29
CYB561A3-220ENST00000545361 HOXB7P09629 217 aa13.22□□□□□ -0.29
CYB561A3-220ENST00000545361 PRR29P0C7W0 189 aa13.22□□□□□ -0.29
CYB561A3-220ENST00000545361 ZBTB48P10074 688 aaPredicted RBP13.22□□□□□ -0.29
CYB561A3-220ENST00000545361 STRIP1Q5VSL9 837 aa13.22□□□□□ -0.29
CYB561A3-220ENST00000545361 RIC3Q7Z5B4 369 aa13.22□□□□□ -0.29
CYB561A3-220ENST00000545361 JARID2Q92833 1246 aaPredicted RBP13.22□□□□□ -0.29
CYB561A3-220ENST00000545361 WNK4Q96J92 1243 aa13.22□□□□□ -0.29
CYB561A3-220ENST00000545361 CLMNQ96JQ2 1002 aa13.22□□□□□ -0.29
CYB561A3-220ENST00000545361 PCCAP05165 728 aaPredicted RBP13.21□□□□□ -0.29
CYB561A3-220ENST00000545361 GOLGA2Q08379 1002 aa13.21□□□□□ -0.29
CYB561A3-220ENST00000545361 CRHR2Q13324 411 aa13.21□□□□□ -0.29
CYB561A3-220ENST00000545361 NEUROD2Q15784 382 aa13.21□□□□□ -0.29
CYB561A3-220ENST00000545361 MYD88Q99836 296 aa13.21□□□□□ -0.29
CYB561A3-220ENST00000545361 TMEM106CQ9BVX2 250 aa13.21□□□□□ -0.29
CYB561A3-220ENST00000545361 EFCC1Q9HA90 598 aa13.21□□□□□ -0.29
CYB561A3-220ENST00000545361 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.29
CYB561A3-220ENST00000545361 CAP1Q01518 475 aa13.2□□□□□ -0.3
CYB561A3-220ENST00000545361 KIAA0825Q8IV33 1275 aa13.2□□□□□ -0.3
CYB561A3-220ENST00000545361 COA1Q9GZY4 146 aa13.2□□□□□ -0.3
CYB561A3-220ENST00000545361 DEFB129Q9H1M3 183 aa13.2□□□□□ -0.3
CYB561A3-220ENST00000545361 COL1A1P02452 1464 aaPredicted RBP13.2□□□□□ -0.3
CYB561A3-220ENST00000545361 SSC5DA1L4H1 1573 aa13.2□□□□□ -0.3
CYB561A3-220ENST00000545361 MMP14P50281 582 aa13.19□□□□□ -0.3
CYB561A3-220ENST00000545361 CCT4P50991 539 aaKnown RBP13.19□□□□□ -0.3
CYB561A3-220ENST00000545361 SP3Q02447 781 aa13.19□□□□□ -0.3
CYB561A3-220ENST00000545361 MAP3K11Q16584 847 aa13.19□□□□□ -0.3
CYB561A3-220ENST00000545361 DUSP27Q5VZP5 1158 aa13.19□□□□□ -0.3
CYB561A3-220ENST00000545361 OTUD7BQ6GQQ9 843 aa13.19□□□□□ -0.3
CYB561A3-220ENST00000545361 CCDC191Q8NCU4 936 aa13.19□□□□□ -0.3
CYB561A3-220ENST00000545361 ZBED3Q96IU2 234 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms