RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 NAA30Q147X3 362 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-222ENST00000545308 SETDB1Q15047 1291 aa6.68□□□□□ -1.34
SNHG1-222ENST00000545308 NLRP13Q86W25 1043 aa6.68□□□□□ -1.34
SNHG1-222ENST00000545308 ETFBKMTQ8IXQ9 262 aa6.68□□□□□ -1.34
SNHG1-222ENST00000545308 DCAF11Q8TEB1 546 aa6.68□□□□□ -1.34
SNHG1-222ENST00000545308 FSTP19883 344 aa6.67□□□□□ -1.34
SNHG1-222ENST00000545308 BRD2P25440 801 aaKnown RBP6.67□□□□□ -1.34
SNHG1-222ENST00000545308 TAGLNQ01995 201 aaKnown RBP6.67□□□□□ -1.34
SNHG1-222ENST00000545308 Q6ZS46 218 aa6.67□□□□□ -1.34
SNHG1-222ENST00000545308 FBXO33Q7Z6M2 555 aa6.67□□□□□ -1.34
SNHG1-222ENST00000545308 CACTIN-AS1Q8N1I8 211 aa6.67□□□□□ -1.34
SNHG1-222ENST00000545308 COL26A1Q96A83 441 aa6.67□□□□□ -1.34
SNHG1-222ENST00000545308 KRTAP4-12Q9BQ66 201 aa6.67□□□□□ -1.34
SNHG1-222ENST00000545308 SAP130Q9H0E3 1048 aa6.67□□□□□ -1.34
SNHG1-222ENST00000545308 LOC105371045A0A1W2PR82 267 aa6.66□□□□□ -1.34
SNHG1-222ENST00000545308 PTCD1O75127 700 aaKnown RBP6.66□□□□□ -1.34
SNHG1-222ENST00000545308 MAPK1P28482 360 aa6.66□□□□□ -1.34
SNHG1-222ENST00000545308 SF3B2Q13435 895 aaKnown RBP6.66□□□□□ -1.34
SNHG1-222ENST00000545308 TRIP4Q15650 581 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-222ENST00000545308 C16orf46Q6P387 395 aa6.66□□□□□ -1.34
SNHG1-222ENST00000545308 ASB16Q96NS5 453 aa6.66□□□□□ -1.34
SNHG1-222ENST00000545308 MUC3BQ9H195 1237 aa6.66□□□□□ -1.34
SNHG1-222ENST00000545308 DCTN4Q9UJW0 460 aa6.66□□□□□ -1.34
SNHG1-222ENST00000545308 TRIM33Q9UPN9 1127 aa6.66□□□□□ -1.34
SNHG1-222ENST00000545308 PPME1Q9Y570 386 aa6.66□□□□□ -1.34
SNHG1-222ENST00000545308 FAM26DQ5JW98 314 aa6.65□□□□□ -1.34
SNHG1-222ENST00000545308 KRTAP1-3Q8IUG1 177 aa6.65□□□□□ -1.34
SNHG1-222ENST00000545308 OR13H1Q8NG92 308 aa6.65□□□□□ -1.34
SNHG1-222ENST00000545308 HELQQ8TDG4 1101 aa6.65□□□□□ -1.34
SNHG1-222ENST00000545308 UBAP1LF5GYI3 381 aa6.64□□□□□ -1.35
SNHG1-222ENST00000545308 TNFRSF10BO14763 440 aa6.64□□□□□ -1.35
SNHG1-222ENST00000545308 NPR3P17342 541 aa6.64□□□□□ -1.35
SNHG1-222ENST00000545308 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.64□□□□□ -1.35
SNHG1-222ENST00000545308 AGGF1Q8N302 714 aaeCLIP6.64□□□□□ -1.35
SNHG1-222ENST00000545308 PIK3R5Q8WYR1 880 aa6.64□□□□□ -1.35
SNHG1-222ENST00000545308 GLB1P16278 677 aa6.63□□□□□ -1.35
SNHG1-222ENST00000545308 COL13A1Q5TAT6 717 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-222ENST00000545308 GALNT11Q8NCW6 608 aa6.63□□□□□ -1.35
SNHG1-222ENST00000545308 PCMTD2Q9NV79 361 aa6.63□□□□□ -1.35
SNHG1-222ENST00000545308 FAM13BQ9NYF5 915 aa6.63□□□□□ -1.35
SNHG1-222ENST00000545308 RAXQ9Y2V3 346 aa6.63□□□□□ -1.35
SNHG1-222ENST00000545308 LINC01387J3KSC0 135 aa6.62□□□□□ -1.35
SNHG1-222ENST00000545308 HYAL2Q12891 473 aa6.62□□□□□ -1.35
SNHG1-222ENST00000545308 MPSTP25325 297 aa6.61□□□□□ -1.35
SNHG1-222ENST00000545308 SSTR4P31391 388 aa6.61□□□□□ -1.35
SNHG1-222ENST00000545308 CD97P48960 835 aa6.61□□□□□ -1.35
SNHG1-222ENST00000545308 ATP11AP98196 1134 aa6.61□□□□□ -1.35
SNHG1-222ENST00000545308 ZNF326Q5BKZ1 582 aaKnown RBP6.61□□□□□ -1.35
SNHG1-222ENST00000545308 LCE3BQ5TA77 95 aa6.61□□□□□ -1.35
SNHG1-222ENST00000545308 CEP135Q66GS9 1140 aa6.61□□□□□ -1.35
SNHG1-222ENST00000545308 ZSCAN29Q8IWY8 852 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-222ENST00000545308 SPACA7Q96KW9 195 aa6.61□□□□□ -1.35
SNHG1-222ENST00000545308 UBL7Q96S82 380 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-222ENST00000545308 FNDC3AQ9Y2H6 1198 aaKnown RBP6.61□□□□□ -1.35
SNHG1-222ENST00000545308 TM4SF5O14894 197 aa6.6□□□□□ -1.35
SNHG1-222ENST00000545308 GSC2O15499 205 aa6.6□□□□□ -1.35
SNHG1-222ENST00000545308 SMNDC1O75940 238 aaKnown RBP eCLIP6.6□□□□□ -1.352e-47■■■■■ 33.3
SNHG1-222ENST00000545308 FAM13AO94988 1023 aa6.6□□□□□ -1.35
SNHG1-222ENST00000545308 WISP1O95388 367 aa6.6□□□□□ -1.35
SNHG1-222ENST00000545308 CD68P34810 354 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-222ENST00000545308 ZAP70P43403 619 aa6.6□□□□□ -1.35
SNHG1-222ENST00000545308 TTC39BQ5VTQ0 682 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-222ENST00000545308 LACRTQ9GZZ8 138 aa6.6□□□□□ -1.35
SNHG1-222ENST00000545308 DHX15O43143 795 aaKnown RBP6.59□□□□□ -1.35
SNHG1-222ENST00000545308 KIF4AO95239 1232 aa6.59□□□□□ -1.35
SNHG1-222ENST00000545308 IGLV1-40P01703 118 aa6.59□□□□□ -1.35
SNHG1-222ENST00000545308 VAMP1P23763 118 aa6.59□□□□□ -1.35
SNHG1-222ENST00000545308 CDC27P30260 824 aa6.59□□□□□ -1.35
SNHG1-222ENST00000545308 COL19A1Q14993 1142 aa6.59□□□□□ -1.35
SNHG1-222ENST00000545308 MCTP1Q6DN14 999 aa6.59□□□□□ -1.35
SNHG1-222ENST00000545308 TXNDC11Q6PKC3 985 aa6.59□□□□□ -1.35
SNHG1-222ENST00000545308 ADAMTSL4Q6UY14 1074 aa6.59□□□□□ -1.35
SNHG1-222ENST00000545308 ACAD11Q709F0 780 aa6.59□□□□□ -1.35
SNHG1-222ENST00000545308 TMC7Q7Z402 723 aa6.59□□□□□ -1.35
SNHG1-222ENST00000545308 RBCK1Q9BYM8 510 aa6.59□□□□□ -1.35
SNHG1-222ENST00000545308 CEP41Q9BYV8 373 aa6.59□□□□□ -1.35
SNHG1-222ENST00000545308 RASSF4Q9H2L5 321 aa6.59□□□□□ -1.35
SNHG1-222ENST00000545308 KCNK4Q9NYG8 393 aa6.59□□□□□ -1.35
SNHG1-222ENST00000545308 STOML1Q9UBI4 398 aa6.59□□□□□ -1.35
SNHG1-222ENST00000545308 P4HBP07237 508 aaKnown RBP6.58□□□□□ -1.36
SNHG1-222ENST00000545308 TCF3P15923 654 aa6.58□□□□□ -1.36
SNHG1-222ENST00000545308 ARMC10Q8N2F6 343 aa6.58□□□□□ -1.36
SNHG1-222ENST00000545308 GPR152Q8TDT2 470 aa6.58□□□□□ -1.36
SNHG1-222ENST00000545308 ABI2Q9NYB9 513 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-222ENST00000545308 STIM2Q9P246 746 aa6.58□□□□□ -1.36
SNHG1-222ENST00000545308 FSCN2O14926 492 aa6.57□□□□□ -1.36
SNHG1-222ENST00000545308 ZBTB39O15060 712 aa6.57□□□□□ -1.36
SNHG1-222ENST00000545308 FZD6O60353 706 aa6.57□□□□□ -1.36
SNHG1-222ENST00000545308 MED26O95402 600 aa6.57□□□□□ -1.36
SNHG1-222ENST00000545308 RECKO95980 971 aa6.57□□□□□ -1.36
SNHG1-222ENST00000545308 EIF1AXP47813 144 aaKnown RBP6.57□□□□□ -1.36
SNHG1-222ENST00000545308 UVSSAQ2YD98 709 aa6.57□□□□□ -1.36
SNHG1-222ENST00000545308 EAPPQ56P03 285 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-222ENST00000545308 KIAA1211Q6ZU35 1233 aa6.57□□□□□ -1.36
SNHG1-222ENST00000545308 CEP120Q8N960 986 aa6.57□□□□□ -1.36
SNHG1-222ENST00000545308 KLHL23Q8NBE8 558 aa6.57□□□□□ -1.36
SNHG1-222ENST00000545308 CARD10Q9BWT7 1032 aa6.57□□□□□ -1.36
SNHG1-222ENST00000545308 PBX4Q9BYU1 374 aa6.57□□□□□ -1.36
SNHG1-222ENST00000545308 CCDC87Q9NVE4 849 aa6.57□□□□□ -1.36
SNHG1-222ENST00000545308 COL17A1Q9UMD9 1497 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms