RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 FLIIQ13045 1269 aa9.4□□□□□ -0.9
CPSF7-224ENST00000544990 FKBP5Q13451 457 aaPredicted RBP9.4□□□□□ -0.9
CPSF7-224ENST00000544990 DDX46Q7L014 1031 aaKnown RBP9.4□□□□□ -0.9
CPSF7-224ENST00000544990 ZBTB38Q8NAP3 1195 aaPredicted RBP9.4□□□□□ -0.9
CPSF7-224ENST00000544990 CDCA7LQ96GN5 454 aa9.4□□□□□ -0.9
CPSF7-224ENST00000544990 CWC25Q9NXE8 425 aaPredicted RBP9.4□□□□□ -0.9
CPSF7-224ENST00000544990 LAMB2P55268 1798 aa9.4□□□□□ -0.91
CPSF7-224ENST00000544990 IRS4O14654 1257 aaPredicted RBP9.39□□□□□ -0.91
CPSF7-224ENST00000544990 BBOX1O75936 387 aa9.39□□□□□ -0.91
CPSF7-224ENST00000544990 C1QTNF8P60827 252 aa9.39□□□□□ -0.91
CPSF7-224ENST00000544990 FKBP4Q02790 459 aaKnown RBP eCLIP9.39□□□□□ -0.91
CPSF7-224ENST00000544990 SLFN5Q08AF3 891 aa9.39□□□□□ -0.91
CPSF7-224ENST00000544990 RTL5Q5HYW3 569 aaPredicted RBP9.39□□□□□ -0.91
CPSF7-224ENST00000544990 G2E3Q7L622 706 aa9.39□□□□□ -0.91
CPSF7-224ENST00000544990 SYNE4Q8N205 404 aa9.39□□□□□ -0.91
CPSF7-224ENST00000544990 ZNF428Q96B54 188 aa9.39□□□□□ -0.91
CPSF7-224ENST00000544990 DDX60Q8IY21 1712 aaKnown RBP9.39□□□□□ -0.91
CPSF7-224ENST00000544990 PPEF1O14829 653 aaPredicted RBP9.38□□□□□ -0.91
CPSF7-224ENST00000544990 PCCAP05165 728 aaPredicted RBP9.38□□□□□ -0.91
CPSF7-224ENST00000544990 GRAPQ13588 217 aa9.38□□□□□ -0.91
CPSF7-224ENST00000544990 SF3B3Q15393 1217 aaKnown RBP9.38□□□□□ -0.91
CPSF7-224ENST00000544990 TMC4Q7Z404 712 aa9.38□□□□□ -0.91
CPSF7-224ENST00000544990 METTL3Q86U44 580 aaKnown RBP9.38□□□□□ -0.91
CPSF7-224ENST00000544990 GRAPLQ8TC17 118 aaPredicted RBP9.38□□□□□ -0.91
CPSF7-224ENST00000544990 DNAAF4Q8WXU2 420 aa9.38□□□□□ -0.91
CPSF7-224ENST00000544990 ADGRG1Q9Y653 693 aa9.38□□□□□ -0.91
CPSF7-224ENST00000544990 ABCC4O15439 1325 aa9.37□□□□□ -0.91
CPSF7-224ENST00000544990 TIAM2Q8IVF5 1701 aa9.37□□□□□ -0.91
CPSF7-224ENST00000544990 GLTPD2A6NH11 291 aa9.37□□□□□ -0.91
CPSF7-224ENST00000544990 PDE8AO60658 829 aa9.37□□□□□ -0.91
CPSF7-224ENST00000544990 IGKV5-2P06315 115 aa9.37□□□□□ -0.91
CPSF7-224ENST00000544990 PRELPP51888 382 aa9.37□□□□□ -0.91
CPSF7-224ENST00000544990 FAM161AQ3B820 660 aa9.37□□□□□ -0.91
CPSF7-224ENST00000544990 SP8Q8IXZ3 490 aa9.37□□□□□ -0.91
CPSF7-224ENST00000544990 PSMD1Q99460 953 aa9.37□□□□□ -0.91
CPSF7-224ENST00000544990 ATP6V0A2Q9Y487 856 aa9.37□□□□□ -0.91
CPSF7-224ENST00000544990 CDHR2Q9BYE9 1310 aa9.36□□□□□ -0.91
CPSF7-224ENST00000544990 NEURL1BA8MQ27 555 aa9.36□□□□□ -0.91
CPSF7-224ENST00000544990 PPP1R3GB7ZBB8 358 aa9.36□□□□□ -0.91
CPSF7-224ENST00000544990 SSTR3P32745 418 aaPredicted RBP9.36□□□□□ -0.91
CPSF7-224ENST00000544990 IARSP41252 1262 aaKnown RBP9.36□□□□□ -0.91
CPSF7-224ENST00000544990 CWF19L2Q2TBE0 894 aaKnown RBP9.36□□□□□ -0.91
CPSF7-224ENST00000544990 CCDC152Q4G0S7 254 aa9.36□□□□□ -0.91
CPSF7-224ENST00000544990 OLFM4Q6UX06 510 aa9.36□□□□□ -0.91
CPSF7-224ENST00000544990 PACS2Q86VP3 889 aa9.36□□□□□ -0.91
CPSF7-224ENST00000544990 C16orf71Q8IYS4 520 aaPredicted RBP9.36□□□□□ -0.91
CPSF7-224ENST00000544990 TTC13Q8NBP0 860 aa9.36□□□□□ -0.91
CPSF7-224ENST00000544990 SUPT20HQ8NEM7 779 aa9.36□□□□□ -0.91
CPSF7-224ENST00000544990 LINS1Q8NG48 757 aa9.36□□□□□ -0.91
CPSF7-224ENST00000544990 PXYLP1Q8TE99 480 aa9.36□□□□□ -0.91
CPSF7-224ENST00000544990 JDP2Q8WYK2 163 aa9.36□□□□□ -0.91
CPSF7-224ENST00000544990 ZNF277Q9NRM2 450 aaPredicted RBP9.36□□□□□ -0.91
CPSF7-224ENST00000544990 TAF1P21675 1872 aa9.36□□□□□ -0.91
CPSF7-224ENST00000544990 MYH3P11055 1940 aa9.35□□□□□ -0.91
CPSF7-224ENST00000544990 CT47B1P0C2W7 299 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-224ENST00000544990 MPNDQ8N594 471 aa9.35□□□□□ -0.91
CPSF7-224ENST00000544990 JARID2Q92833 1246 aaPredicted RBP9.35□□□□□ -0.91
CPSF7-224ENST00000544990 VPS33BQ9H267 617 aa9.35□□□□□ -0.91
CPSF7-224ENST00000544990 RRAGCQ9HB90 399 aa9.35□□□□□ -0.91
CPSF7-224ENST00000544990 NMRK2Q9NPI5 230 aa9.35□□□□□ -0.91
CPSF7-224ENST00000544990 F6X3S4 739 aa9.34□□□□□ -0.91
CPSF7-224ENST00000544990 H7C1W4 665 aa9.34□□□□□ -0.91
CPSF7-224ENST00000544990 RPS8P62241 208 aaKnown RBP9.34□□□□□ -0.91
CPSF7-224ENST00000544990 GCKRQ14397 625 aa9.34□□□□□ -0.91
CPSF7-224ENST00000544990 ALDH1L2Q3SY69 923 aa9.34□□□□□ -0.91
CPSF7-224ENST00000544990 DPP8Q6V1X1 898 aaPredicted RBP9.34□□□□□ -0.91
CPSF7-224ENST00000544990 UBE3BQ7Z3V4 1068 aa9.34□□□□□ -0.91
CPSF7-224ENST00000544990 TRMT2AQ8IZ69 625 aaKnown RBP9.34□□□□□ -0.91
CPSF7-224ENST00000544990 LARGE2Q8N3Y3 721 aa9.34□□□□□ -0.91
CPSF7-224ENST00000544990 SNED1Q8TER0 1413 aa9.33□□□□□ -0.92
CPSF7-224ENST00000544990 TOMM70O94826 608 aa9.33□□□□□ -0.92
CPSF7-224ENST00000544990 MS4A1P11836 297 aa9.33□□□□□ -0.92
CPSF7-224ENST00000544990 VEGFAP15692 232 aaPredicted RBP9.33□□□□□ -0.92
CPSF7-224ENST00000544990 COL9A1P20849 921 aa9.33□□□□□ -0.92
CPSF7-224ENST00000544990 CTSWP56202 376 aa9.33□□□□□ -0.92
CPSF7-224ENST00000544990 EIF6P56537 245 aaKnown RBP9.33□□□□□ -0.92
CPSF7-224ENST00000544990 HNRNPUQ00839 825 aaKnown RBP eCLIP9.33□□□□□ -0.92
CPSF7-224ENST00000544990 BEND3Q5T5X7 828 aa9.33□□□□□ -0.92
CPSF7-224ENST00000544990 SLC4A10Q6U841 1118 aa9.33□□□□□ -0.92
CPSF7-224ENST00000544990 MRPL50Q8N5N7 158 aaKnown RBP9.33□□□□□ -0.92
CPSF7-224ENST00000544990 CELF1Q92879 486 aaKnown RBP9.33□□□□□ -0.92
CPSF7-224ENST00000544990 OTUD5Q96G74 571 aa9.33□□□□□ -0.92
CPSF7-224ENST00000544990 PCMTD1Q96MG8 357 aaPredicted RBP9.33□□□□□ -0.92
CPSF7-224ENST00000544990 PHOX2BQ99453 314 aa9.33□□□□□ -0.92
CPSF7-224ENST00000544990 TMUB1Q9BVT8 246 aa9.33□□□□□ -0.92
CPSF7-224ENST00000544990 REPIN1Q9BWE0 567 aaKnown RBP9.33□□□□□ -0.92
CPSF7-224ENST00000544990 GOPCQ9HD26 462 aa9.33□□□□□ -0.92
CPSF7-224ENST00000544990 PTPRCP08575 1304 aa9.32□□□□□ -0.92
CPSF7-224ENST00000544990 FZD9O00144 591 aa9.32□□□□□ -0.92
CPSF7-224ENST00000544990 PPIP5K2O43314 1243 aa9.32□□□□□ -0.92
CPSF7-224ENST00000544990 ALDH1L1O75891 902 aa9.32□□□□□ -0.92
CPSF7-224ENST00000544990 DDNO94850 711 aaPredicted RBP9.32□□□□□ -0.92
CPSF7-224ENST00000544990 IFFO2Q5TF58 517 aa9.32□□□□□ -0.92
CPSF7-224ENST00000544990 LHX8Q68G74 356 aa9.32□□□□□ -0.92
CPSF7-224ENST00000544990 ANKRD18AQ8IVF6 992 aa9.32□□□□□ -0.92
CPSF7-224ENST00000544990 NIM1KQ8IY84 436 aa9.32□□□□□ -0.92
CPSF7-224ENST00000544990 TTLL11Q8NHH1 800 aa9.32□□□□□ -0.92
CPSF7-224ENST00000544990 SSH1Q8WYL5 1049 aa9.32□□□□□ -0.92
CPSF7-224ENST00000544990 CCDC85AQ96PX6 553 aaPredicted RBP9.32□□□□□ -0.92
CPSF7-224ENST00000544990 KCNK17Q96T54 332 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms