RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 NR1I2O75469 434 aa18.65■□□□□ 0.58
SNRNP70-203ENST00000544278 IFIT5Q13325 482 aaKnown RBP18.65■□□□□ 0.58
SNRNP70-203ENST00000544278 ITGA6P23229 1130 aa18.64■□□□□ 0.58
SNRNP70-203ENST00000544278 U3KPZ7 1027 aaPredicted RBP18.64■□□□□ 0.58
SNRNP70-203ENST00000544278 COL5A2P05997 1499 aaPredicted RBP18.64■□□□□ 0.57
SNRNP70-203ENST00000544278 PGBD1Q96JS3 809 aa18.64■□□□□ 0.57
SNRNP70-203ENST00000544278 CTDNEP1O95476 244 aa18.64■□□□□ 0.57
SNRNP70-203ENST00000544278 PTPDC1A2A3K4 754 aa18.63■□□□□ 0.57
SNRNP70-203ENST00000544278 EPB41L2O43491 1005 aaKnown RBP18.63■□□□□ 0.57
SNRNP70-203ENST00000544278 POLR3DP05423 398 aaPredicted RBP18.63■□□□□ 0.57
SNRNP70-203ENST00000544278 CCDC24Q8N4L8 307 aa18.63■□□□□ 0.57
SNRNP70-203ENST00000544278 RNF113AO15541 343 aaKnown RBP18.63■□□□□ 0.57
SNRNP70-203ENST00000544278 DNTTIP2Q5QJE6 756 aaKnown RBP18.63■□□□□ 0.57
SNRNP70-203ENST00000544278 LEO1Q8WVC0 666 aaPredicted RBP18.63■□□□□ 0.57
SNRNP70-203ENST00000544278 CCDC158Q5M9N0 1113 aa18.62■□□□□ 0.57
SNRNP70-203ENST00000544278 PRDM4Q9UKN5 801 aa18.62■□□□□ 0.57
SNRNP70-203ENST00000544278 UBE2Q2LH0YL09 131 aa18.62■□□□□ 0.57
SNRNP70-203ENST00000544278 SOS2Q07890 1332 aaPredicted RBP18.62■□□□□ 0.57
SNRNP70-203ENST00000544278 TPM2P07951 284 aa18.62■□□□□ 0.57
SNRNP70-203ENST00000544278 ZMYM1Q5SVZ6 1142 aa18.62■□□□□ 0.57
SNRNP70-203ENST00000544278 CHMP4CQ96CF2 233 aa18.62■□□□□ 0.57
SNRNP70-203ENST00000544278 AIFM3Q96NN9 605 aa18.62■□□□□ 0.57
SNRNP70-203ENST00000544278 USPL1Q5W0Q7 1092 aa18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 MYL10Q9BUA6 226 aa18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 SEC31BQ9NQW1 1179 aa18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 HMG20BQ9P0W2 317 aa18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 KIF1AQ12756 1690 aa18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 IRS4O14654 1257 aaPredicted RBP18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 PHF14O94880 888 aa18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 FGAP02671 866 aa18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 PHKA1P46020 1223 aa18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 ANKRD1Q15327 319 aa18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 ATP2B3Q16720 1220 aa18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 ISCA1Q9BUE6 129 aa18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 NUP62CLQ9H1M0 184 aa18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 ZKSCAN5Q9Y2L8 839 aa18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 FOXP2O15409 715 aa18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 MCAMP43121 646 aa18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 DHX32Q7L7V1 743 aaKnown RBP18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 SENP2Q9HC62 589 aa18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 NOL7Q9UMY1 257 aaKnown RBP18.61■□□□□ 0.57
SNRNP70-203ENST00000544278 CPDO75976 1380 aa18.6■□□□□ 0.57
SNRNP70-203ENST00000544278 ARFGEF2Q9Y6D5 1785 aa18.6■□□□□ 0.57
SNRNP70-203ENST00000544278 CCDC82Q8N4S0 544 aa18.6■□□□□ 0.57
SNRNP70-203ENST00000544278 TMEM87AQ8NBN3 555 aa18.6■□□□□ 0.57
SNRNP70-203ENST00000544278 NSUN7Q8NE18 718 aaKnown RBP18.6■□□□□ 0.57
SNRNP70-203ENST00000544278 TNMDQ9H2S6 317 aa18.6■□□□□ 0.57
SNRNP70-203ENST00000544278 KDM4FA0A1W2PPD8 638 aa18.59■□□□□ 0.57
SNRNP70-203ENST00000544278 STARD3NLO95772 234 aa18.59■□□□□ 0.57
SNRNP70-203ENST00000544278 ANO6Q4KMQ2 910 aa18.59■□□□□ 0.57
SNRNP70-203ENST00000544278 SLC9C2Q5TAH2 1124 aa18.59■□□□□ 0.57
SNRNP70-203ENST00000544278 NLRP10Q86W26 655 aa18.59■□□□□ 0.57
SNRNP70-203ENST00000544278 DNAJC25Q9H1X3 360 aa18.59■□□□□ 0.57
SNRNP70-203ENST00000544278 BICDL1Q6ZP65 573 aa18.59■□□□□ 0.57
SNRNP70-203ENST00000544278 TTLL11Q8NHH1 800 aa18.59■□□□□ 0.57
SNRNP70-203ENST00000544278 USP28Q96RU2 1077 aa18.59■□□□□ 0.57
SNRNP70-203ENST00000544278 KRT32Q14532 448 aa18.58■□□□□ 0.57
SNRNP70-203ENST00000544278 SMIM22K7EJ46 135 aa18.58■□□□□ 0.56
SNRNP70-203ENST00000544278 GPAA1O43292 621 aa18.58■□□□□ 0.56
SNRNP70-203ENST00000544278 FAM182BQ5T319 152 aa18.58■□□□□ 0.56
SNRNP70-203ENST00000544278 DZIP3Q86Y13 1208 aaKnown RBP18.58■□□□□ 0.56
SNRNP70-203ENST00000544278 PIH1D3Q9NQM4 214 aaKnown RBP18.58■□□□□ 0.56
SNRNP70-203ENST00000544278 TOMM22Q9NS69 142 aa18.58■□□□□ 0.56
SNRNP70-203ENST00000544278 WWC3Q9ULE0 1092 aa18.58■□□□□ 0.56
SNRNP70-203ENST00000544278 CRYBG1Q9Y4K1 1723 aa18.58■□□□□ 0.56
SNRNP70-203ENST00000544278 PDCP20941 246 aa18.57■□□□□ 0.56
SNRNP70-203ENST00000544278 ISM2Q6H9L7 571 aa18.57■□□□□ 0.56
SNRNP70-203ENST00000544278 PALLDQ8WX93 1383 aa18.57■□□□□ 0.56
SNRNP70-203ENST00000544278 KLF18A0A0U1RQI7 1052 aa18.57■□□□□ 0.56
SNRNP70-203ENST00000544278 PDIA3P30101 505 aaKnown RBP18.57■□□□□ 0.56
SNRNP70-203ENST00000544278 RESTQ13127 1097 aa18.57■□□□□ 0.56
SNRNP70-203ENST00000544278 TYRO3Q06418 890 aa18.57■□□□□ 0.56
SNRNP70-203ENST00000544278 MAP3K11Q16584 847 aa18.56■□□□□ 0.56
SNRNP70-203ENST00000544278 RRP12Q5JTH9 1297 aaKnown RBP18.56■□□□□ 0.56
SNRNP70-203ENST00000544278 ZKSCAN3Q9BRR0 538 aa18.56■□□□□ 0.56
SNRNP70-203ENST00000544278 CCDC39Q9UFE4 941 aa18.56■□□□□ 0.56
SNRNP70-203ENST00000544278 NRBP1Q9UHY1 535 aa18.56■□□□□ 0.56
SNRNP70-203ENST00000544278 GOLGA8BA8MQT2 603 aa18.56■□□□□ 0.56
SNRNP70-203ENST00000544278 PRC1O43663 620 aa18.56■□□□□ 0.56
SNRNP70-203ENST00000544278 GIGYF2Q6Y7W6 1299 aaKnown RBP18.56■□□□□ 0.56
SNRNP70-203ENST00000544278 ZBTB38Q8NAP3 1195 aaPredicted RBP18.56■□□□□ 0.56
SNRNP70-203ENST00000544278 UBN2Q6ZU65 1347 aa18.56■□□□□ 0.56
SNRNP70-203ENST00000544278 CMTR1Q8N1G2 835 aaKnown RBP18.55■□□□□ 0.56
SNRNP70-203ENST00000544278 EXOC5O00471 708 aa18.55■□□□□ 0.56
SNRNP70-203ENST00000544278 NKX1-1Q15270 411 aaPredicted RBP18.55■□□□□ 0.56
SNRNP70-203ENST00000544278 MAP3K15Q6ZN16 1313 aa18.55■□□□□ 0.56
SNRNP70-203ENST00000544278 KCPQ6ZWJ8 1503 aa18.55■□□□□ 0.56
SNRNP70-203ENST00000544278 DRC7Q8IY82 874 aa18.55■□□□□ 0.56
SNRNP70-203ENST00000544278 FUCA2Q9BTY2 467 aa18.55■□□□□ 0.56
SNRNP70-203ENST00000544278 MRVI1Q9Y6F6 885 aa18.55■□□□□ 0.56
SNRNP70-203ENST00000544278 SH3TC1Q8TE82 1336 aa18.55■□□□□ 0.56
SNRNP70-203ENST00000544278 KCNQ2O43526 872 aa18.55■□□□□ 0.56
SNRNP70-203ENST00000544278 CYP19A1P11511 503 aaPredicted RBP18.55■□□□□ 0.56
SNRNP70-203ENST00000544278 ME1P48163 572 aa18.55■□□□□ 0.56
SNRNP70-203ENST00000544278 SLC4A8Q2Y0W8 1093 aa18.55■□□□□ 0.56
SNRNP70-203ENST00000544278 GOLPH3LQ9H4A5 285 aa18.55■□□□□ 0.56
SNRNP70-203ENST00000544278 HELLSQ9NRZ9 838 aa18.55■□□□□ 0.56
SNRNP70-203ENST00000544278 ADAMTS7Q9UKP4 1686 aa18.54■□□□□ 0.56
SNRNP70-203ENST00000544278 ADD1P35611 737 aaKnown RBP18.54■□□□□ 0.56
SNRNP70-203ENST00000544278 PIP4K2BP78356 416 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms