RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 TXLNAP40222 546 aa21.14■□□□□ 0.97
CCT4-204ENST00000544079 FMN2Q9NZ56 1722 aa21.13■□□□□ 0.97
CCT4-204ENST00000544079 ARHGAP6O43182 974 aa21.13■□□□□ 0.97
CCT4-204ENST00000544079 NLRP12P59046 1061 aa21.13■□□□□ 0.97
CCT4-204ENST00000544079 STK3Q13188 491 aa21.13■□□□□ 0.97
CCT4-204ENST00000544079 OS9Q13438 667 aaPredicted RBP21.13■□□□□ 0.97
CCT4-204ENST00000544079 PPM1EQ8WY54 764 aa21.13■□□□□ 0.97
CCT4-204ENST00000544079 ZFP91Q96JP5 570 aaPredicted RBP21.13■□□□□ 0.97
CCT4-204ENST00000544079 NCAPHQ15003 741 aa21.13■□□□□ 0.97
CCT4-204ENST00000544079 ADALQ6DHV7 355 aa21.13■□□□□ 0.97
CCT4-204ENST00000544079 FAM227BQ96M60 508 aa21.13■□□□□ 0.97
CCT4-204ENST00000544079 SDF4Q9BRK5 362 aa21.13■□□□□ 0.97
CCT4-204ENST00000544079 USP31Q70CQ4 1352 aa21.13■□□□□ 0.97
CCT4-204ENST00000544079 MAP3K19Q56UN5 1328 aa21.12■□□□□ 0.97
CCT4-204ENST00000544079 NUTM2FA1L443 756 aa21.12■□□□□ 0.97
CCT4-204ENST00000544079 VWA3AA6NCI4 1184 aa21.12■□□□□ 0.97
CCT4-204ENST00000544079 H3BQF6 201 aa21.12■□□□□ 0.97
CCT4-204ENST00000544079 FANCCQ00597 558 aa21.12■□□□□ 0.97
CCT4-204ENST00000544079 NUTM2GQ5VZR2 741 aa21.12■□□□□ 0.97
CCT4-204ENST00000544079 USP28Q96RU2 1077 aa21.12■□□□□ 0.97
CCT4-204ENST00000544079 FOXO3O43524 673 aa21.12■□□□□ 0.97
CCT4-204ENST00000544079 CPP00450 1065 aa21.12■□□□□ 0.97
CCT4-204ENST00000544079 GYS2P54840 703 aa21.12■□□□□ 0.97
CCT4-204ENST00000544079 APOBRQ0VD83 1088 aa21.12■□□□□ 0.97
CCT4-204ENST00000544079 COL9A3Q14050 684 aaPredicted RBP21.12■□□□□ 0.97
CCT4-204ENST00000544079 DPCR1Q3MIW9 517 aa21.12■□□□□ 0.97
CCT4-204ENST00000544079 SUGP1Q8IWZ8 645 aaKnown RBP21.12■□□□□ 0.97
CCT4-204ENST00000544079 DIP2CQ9Y2E4 1556 aa21.11■□□□□ 0.97
CCT4-204ENST00000544079 EIF3JO75822 258 aaKnown RBP21.11■□□□□ 0.97
CCT4-204ENST00000544079 ALDH1L1O75891 902 aa21.11■□□□□ 0.97
CCT4-204ENST00000544079 USP5P45974 858 aa21.11■□□□□ 0.97
CCT4-204ENST00000544079 DDX11Q96FC9 970 aa21.11■□□□□ 0.97
CCT4-204ENST00000544079 TCEANC2Q96MN5 208 aa21.11■□□□□ 0.97
CCT4-204ENST00000544079 PFKFB2O60825 505 aa21.11■□□□□ 0.97
CCT4-204ENST00000544079 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.1■□□□□ 0.97
CCT4-204ENST00000544079 ATP2B1P20020 1258 aa21.1■□□□□ 0.97
CCT4-204ENST00000544079 ME1P48163 572 aa21.1■□□□□ 0.97
CCT4-204ENST00000544079 CORO7P57737 925 aa21.1■□□□□ 0.97
CCT4-204ENST00000544079 CEBPZQ03701 1054 aaKnown RBP21.1■□□□□ 0.97
CCT4-204ENST00000544079 HDXQ7Z353 690 aa21.1■□□□□ 0.97
CCT4-204ENST00000544079 CHMP4CQ96CF2 233 aa21.1■□□□□ 0.97
CCT4-204ENST00000544079 HDAC5Q9UQL6 1122 aa21.1■□□□□ 0.97
CCT4-204ENST00000544079 PPP2R2CQ9Y2T4 447 aa21.1■□□□□ 0.97
CCT4-204ENST00000544079 SBNO1A3KN83 1393 aa21.1■□□□□ 0.97
CCT4-204ENST00000544079 NBPF7P0C2Y1 421 aaPredicted RBP21.09■□□□□ 0.97
CCT4-204ENST00000544079 HSP90AB2PQ58FF8 381 aa21.09■□□□□ 0.97
CCT4-204ENST00000544079 SIRT1Q96EB6 747 aa21.09■□□□□ 0.97
CCT4-204ENST00000544079 NEK1Q96PY6 1258 aa21.09■□□□□ 0.97
CCT4-204ENST00000544079 RTEL1Q9NZ71 1219 aa21.09■□□□□ 0.97
CCT4-204ENST00000544079 RIMS1Q86UR5 1692 aaKnown RBP21.09■□□□□ 0.97
CCT4-204ENST00000544079 A0A087WWV3 80 aa21.09■□□□□ 0.97
CCT4-204ENST00000544079 EIF3CLB5ME19 914 aaKnown RBP21.09■□□□□ 0.97
CCT4-204ENST00000544079 GNL2Q13823 731 aaKnown RBP21.09■□□□□ 0.97
CCT4-204ENST00000544079 BEND3Q5T5X7 828 aa21.09■□□□□ 0.97
CCT4-204ENST00000544079 PACS2Q86VP3 889 aa21.09■□□□□ 0.97
CCT4-204ENST00000544079 EIF3CQ99613 913 aaKnown RBP21.09■□□□□ 0.97
CCT4-204ENST00000544079 RAB21Q9UL25 225 aa21.09■□□□□ 0.97
CCT4-204ENST00000544079 A0A0D9SFI3 127 aa21.08■□□□□ 0.97
CCT4-204ENST00000544079 SWT1Q5T5J6 900 aaKnown RBP21.08■□□□□ 0.97
CCT4-204ENST00000544079 UTP14AQ9BVJ6 771 aaKnown RBP21.08■□□□□ 0.97
CCT4-204ENST00000544079 NEDD4P46934 1319 aa21.08■□□□□ 0.97
CCT4-204ENST00000544079 TUBB2AQ13885 445 aa21.08■□□□□ 0.96
CCT4-204ENST00000544079 VSTM4Q8IW00 320 aa21.08■□□□□ 0.96
CCT4-204ENST00000544079 NSUN7Q8NE18 718 aaKnown RBP21.08■□□□□ 0.96
CCT4-204ENST00000544079 TUBB2BQ9BVA1 445 aa21.08■□□□□ 0.96
CCT4-204ENST00000544079 DEF6Q9H4E7 631 aa21.08■□□□□ 0.96
CCT4-204ENST00000544079 PCDHA7Q9UN72 937 aa21.08■□□□□ 0.96
CCT4-204ENST00000544079 TMEM139Q8IV31 216 aa21.07■□□□□ 0.96
CCT4-204ENST00000544079 KIFC2Q96AC6 838 aa21.07■□□□□ 0.96
CCT4-204ENST00000544079 SOX12O15370 315 aa21.07■□□□□ 0.96
CCT4-204ENST00000544079 ERLIN1O75477 346 aa21.07■□□□□ 0.96
CCT4-204ENST00000544079 SLC3A2P08195 630 aaKnown RBP21.07■□□□□ 0.96
CCT4-204ENST00000544079 SCRN1Q12765 414 aa21.07■□□□□ 0.96
CCT4-204ENST00000544079 EPC1Q9H2F5 836 aa21.07■□□□□ 0.96
CCT4-204ENST00000544079 TAF6LQ9Y6J9 622 aa21.07■□□□□ 0.96
CCT4-204ENST00000544079 TAF5LO75529 589 aa21.06■□□□□ 0.96
CCT4-204ENST00000544079 GNG11P61952 73 aa21.06■□□□□ 0.96
CCT4-204ENST00000544079 BEND6Q5SZJ8 279 aaPredicted RBP21.06■□□□□ 0.96
CCT4-204ENST00000544079 HDGFL1Q5TGJ6 251 aa21.06■□□□□ 0.96
CCT4-204ENST00000544079 Q6ZUG5 572 aa21.06■□□□□ 0.96
CCT4-204ENST00000544079 MSANTD4Q8NCY6 345 aa21.06■□□□□ 0.96
CCT4-204ENST00000544079 DNAAF4Q8WXU2 420 aa21.06■□□□□ 0.96
CCT4-204ENST00000544079 VPS18Q9P253 973 aa21.06■□□□□ 0.96
CCT4-204ENST00000544079 NCAPD2Q15021 1401 aa21.06■□□□□ 0.96
CCT4-204ENST00000544079 RFX7Q2KHR2 1363 aa21.06■□□□□ 0.96
CCT4-204ENST00000544079 TUBBP07437 444 aa21.06■□□□□ 0.96
CCT4-204ENST00000544079 HSP90B1P14625 803 aaKnown RBP21.06■□□□□ 0.96
CCT4-204ENST00000544079 EFCAB13Q8IY85 973 aa21.06■□□□□ 0.96
CCT4-204ENST00000544079 KCNG4Q8TDN1 519 aa21.06■□□□□ 0.96
CCT4-204ENST00000544079 FTOQ9C0B1 505 aaKnown RBP eCLIP21.06■□□□□ 0.96
CCT4-204ENST00000544079 IGSF1Q8N6C5 1336 aa21.05■□□□□ 0.96
CCT4-204ENST00000544079 MED1Q15648 1581 aaPredicted RBP21.05■□□□□ 0.96
CCT4-204ENST00000544079 GNAT3A8MTJ3 354 aa21.05■□□□□ 0.96
CCT4-204ENST00000544079 STX10O60499 249 aa21.05■□□□□ 0.96
CCT4-204ENST00000544079 HMGB1P09429 215 aaKnown RBP21.05■□□□□ 0.96
CCT4-204ENST00000544079 UBASH3AP57075 661 aa21.05■□□□□ 0.96
CCT4-204ENST00000544079 TAF7Q15545 349 aaPredicted RBP21.05■□□□□ 0.96
CCT4-204ENST00000544079 AACSQ86V21 672 aa21.05■□□□□ 0.96
CCT4-204ENST00000544079 NECTIN2Q92692 538 aa21.05■□□□□ 0.96
CCT4-204ENST00000544079 YEATS4O95619 227 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms